Gene family  

Sub-families
ORTHO001590 (37 genes in 20 species)
ORTHO007343 (23 genes in 21 species)
ORTHO008375 (21 genes in 17 species)
View all sub-families (26)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (8 genes)
ath
Arabidopsis thaliana (8 genes)
bdi
Brachypodium distachyon (13 genes)
cpa
Carica papaya (5 genes)
cre
Chlamydomonas reinhardtii (3 genes)
fve
Fragaria vesca (6 genes)
gma
Glycine max (22 genes)
lja
Lotus japonicus (8 genes)
mdo
Malus domestica (19 genes)
mes
Manihot esculenta (9 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (5 genes)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (11 genes)
osaindica
Oryza sativa ssp. indica (13 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (8 genes)
ptr
Populus trichocarpa (14 genes)
rco
Ricinus communis (6 genes)
sbi
Sorghum bicolor (17 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (7 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (8 genes)
zma
Zea mays (24 genes)



The gene family HOM000421 has 222 genes in 25 species (25 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 12, showing 20 records out of 222 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G15250 aly name=fgenesh2_kg.1__1579__AT1G14510.1;pid=471625;prot=eq;tid=471625 - scaffold_1 No
AL3G11610 aly name=fgenesh2_kg.3__1160__AT3G11200.1;pid=478459;prot=eq;tid=478459 - scaffold_3 No
AL5G01660 aly name=scaffold_500181.1;pid=904477;prot=eq;tid=935990 + scaffold_5 No
AL5G10620 aly name=fgenesh2_kg.5__761__AT3G42790.1;pid=484769;prot=eq;tid=484769 - scaffold_5 No
AL6G05210 aly name=fgenesh2_kg.6__497__AT5G05610.2;pid=487363;prot=eq;tid=487363 - scaffold_6 No
AL6G20790 aly name=scaffold_602145.1;pid=910088;prot=eq;tid=941601 - scaffold_6 No
AL6G20800 aly name=scaffold_602146.1;pid=910089;prot=eq;tid=941602 - scaffold_6 Yes
AL6G26490 aly name=scaffold_602752.1;pid=910695;prot=eq;tid=942208 - scaffold_6 No
AT1G14510 ath AL7 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.;alfin-like 7 transcript=eq;prot=eq; - 1 No
AT2G02470 ath AL6 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.;alfin-like 6 transcript=eq;prot=eq; + 2 No
AT3G11200 ath AL2 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.;alfin-like 2 transcript=eq;prot=eq; - 3 No
AT3G42790 ath AL3 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.;alfin-like 3 transcript=eq;prot=eq; - 3 No
AT5G05610 ath AL1 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.;alfin-like 1 transcript=eq;prot=eq; - 5 No
AT5G20510 ath AL5 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.;alfin-like 5 transcript=eq;prot=eq; - 5 No
AT5G20520 ath Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; - 5 Yes
AT5G26210 ath AL4 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.;alfin-like 4 transcript=eq;prot=eq; - 5 No
BD1G03900 bdi DNA-dependent ATPase activity (Blast2GO) pid=Bradi1g03900.1;tid=Bradi1g03900.1;GeneName=Bradi1g03900;transcript=eq;prot=eq + Bd1 No
BD1G21740 bdi DNA-dependent ATPase activity (Blast2GO) pid=Bradi1g21740.1;tid=Bradi1g21740.1;GeneName=Bradi1g21740;transcript=eq;prot=eq - Bd1 No
BD1G21755 bdi pid=Bradi1g21755.1;tid=Bradi1g21755.1;GeneName=Bradi1g21755;transcript=eq;prot=eq - Bd1 Yes
BD1G53660 bdi DNA-dependent ATPase activity (Blast2GO) pid=Bradi1g53660.1;tid=Bradi1g53660.1;GeneName=Bradi1g53660;transcript=eq;prot=eq + Bd1 No
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