Gene family  

Sub-families
ORTHO003002 (30 genes in 19 species)
ORTHO006881 (23 genes in 17 species)
ORTHO010463 (19 genes in 15 species)
View all sub-families (23)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (12 genes)
ath
Arabidopsis thaliana (10 genes)
bdi
Brachypodium distachyon (13 genes)
cpa
Carica papaya (10 genes)
fve
Fragaria vesca (9 genes)
gma
Glycine max (31 genes)
lja
Lotus japonicus (9 genes)
mdo
Malus domestica (23 genes)
mes
Manihot esculenta (16 genes)
mtr
Medicago truncatula (12 genes)
osa
Oryza sativa ssp. japonica (13 genes)
osaindica
Oryza sativa ssp. indica (11 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (18 genes)
rco
Ricinus communis (10 genes)
sbi
Sorghum bicolor (10 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (10 genes)
vvi
Vitis vinifera (7 genes)
zma
Zea mays (16 genes)



The gene family HOM000374 has 244 genes in 20 species (7 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 13, showing 20 records out of 244 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G01920 aly name=fgenesh2_kg.9__113__AT4G12690.1;pid=497148;prot=eq;tid=497148 + scaffold_9 No
AL2G30060 aly name=scaffold_203104.1;pid=896030;prot=eq;tid=927543 + scaffold_2 Yes
AL3G04600 aly name=fgenesh2_kg.3__458__AT3G04860.1;pid=477757;prot=eq;tid=477757 - scaffold_3 No
AL3G13780 aly name=fgenesh2_kg.3__1409__AT3G13229.1;pid=478708;prot=eq;tid=478708 - scaffold_3 No
AL3G29910 aly name=fgenesh2_kg.3__2772__AT2G04220.1;pid=480071;prot=eq;tid=480071 + scaffold_3 No
AL4G06230 aly name=fgenesh2_kg.4__438__AT2G25200.1;pid=481378;prot=eq;tid=481378 - scaffold_4 No
AL4G12390 aly name=fgenesh2_kg.4__797__AT2G27770.1;pid=481737;prot=eq;tid=481737 + scaffold_4 No
AL4G21860 aly name=Al_scaffold_0004_2143;pid=869980;prot=eq;tid=901493 - scaffold_4 No
AL4G21940 aly name=fgenesh2_kg.4__1686__AT2G36470.1;pid=482626;prot=eq;tid=482626 - scaffold_4 No
AL6G10740 aly name=scaffold_601114.1;pid=909057;prot=eq;tid=940570 - scaffold_6 No
AL6G28640 aly name=fgenesh2_kg.6__2777__AT5G28150.1;pid=489643;prot=eq;tid=489643 + scaffold_6 No
AL8G11010 aly name=scaffold_801120.1;pid=917720;prot=eq;tid=949233 - scaffold_8 No
AT2G04220 ath Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT4G12690.2); Has 284 Blast hits to 282 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 284; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Plant protein of unknown function (DUF868) transcript=eq;prot=eq; + 2 No
AT2G25200 ath Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT5G11000.1); Has 283 Blast hits to 283 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 283; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Plant protein of unknown function (DUF868) transcript=eq;prot=eq; - 2 No
AT2G27770 ath Plant protein of unknown function (DUF868); LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT3G04860.1); Has 288 Blast hits to 288 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 288; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Plant protein of unknown function (DUF868) transcript=eq;prot=eq; - 2 No
AT2G36470 ath Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT2G27770.1); Has 289 Blast hits to 289 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 285; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).;Plant protein of unknown function (DUF868) transcript=eq;prot=eq; - 2 No
AT3G04860 ath Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT5G28150.1); Has 291 Blast hits to 289 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 291; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Plant protein of unknown function (DUF868) transcript=eq;prot=eq; - 3 No
AT3G13229 ath Plant protein of unknown function (DUF868); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT4G12690.2); Has 284 Blast hits to 284 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 284; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Plant protein of unknown function (DUF868) transcript=eq;prot=eq; - 3 No
AT4G12690 ath Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT2G04220.1); Has 288 Blast hits to 286 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 288; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Plant protein of unknown function (DUF868) transcript=eq;prot=eq; + 4 No
AT5G11000 ath Plant protein of unknown function (DUF868); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT2G25200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Plant protein of unknown function (DUF868) transcript=eq;prot=eq; - 5 No
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