Gene family  

Sub-families
ORTHO003562 (29 genes in 17 species)
ORTHO005366 (26 genes in 18 species)
ORTHO006287 (24 genes in 12 species)
View all sub-families (25)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (9 genes)
ath
Arabidopsis thaliana (8 genes)
bdi
Brachypodium distachyon (10 genes)
cpa
Carica papaya (8 genes)
fve
Fragaria vesca (14 genes)
gma
Glycine max (23 genes)
lja
Lotus japonicus (8 genes)
mdo
Malus domestica (20 genes)
mes
Manihot esculenta (17 genes)
mtr
Medicago truncatula (6 genes)
osa
Oryza sativa ssp. japonica (12 genes)
osaindica
Oryza sativa ssp. indica (12 genes)
ppa
Physcomitrella patens (15 genes)
ptr
Populus trichocarpa (23 genes)
rco
Ricinus communis (12 genes)
sbi
Sorghum bicolor (12 genes)
smo
Selaginella moellendorffii (6 genes)
tca
Theobroma cacao (10 genes)
vvi
Vitis vinifera (10 genes)
zma
Zea mays (12 genes)



The gene family HOM000368 has 247 genes in 20 species (4 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 13, showing 20 records out of 247 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G36790 aly name=fgenesh2_kg.1__3611__AT1G35140.1;pid=473657;prot=eq;tid=473657 + scaffold_1 No
AL3G02190 aly name=fgenesh2_kg.3__244__AT3G02970.1;pid=477543;prot=eq;tid=477543 - scaffold_3 No
AL3G37950 aly name=fgenesh2_kg.3__3307__AT2G17230.1;pid=480606;prot=eq;tid=480606 - scaffold_3 No
AL4G20450 aly name=fgenesh2_kg.4__1540__AT2G35150.1;pid=482480;prot=eq;tid=482480 - scaffold_4 No
AL6G09080 aly name=fgenesh2_kg.6__891__AT5G09440.1;pid=487757;prot=eq;tid=487757 + scaffold_6 No
AL6G30070 aly name=fgenesh2_kg.6__2850__AT4G08950.1;pid=489716;prot=eq;tid=489716 - scaffold_6 No
AL8G15790 aly name=scaffold_801590.1;pid=918190;prot=eq;tid=949703 - scaffold_8 No
AL8G30940 aly name=Al_scaffold_0008_2968;pid=886704;prot=eq;tid=918217 + scaffold_8 No
AL8G30950 aly name=scaffold_803141.1;pid=919741;prot=eq;tid=951254 + scaffold_8 No
AT1G35140 ath At1g35140 (At1g35140/T32G9_32) mRNA, complete cds;Phosphate-responsive 1 family protein transcript=eq;prot=eq; + 1 No
AT2G17230 ath EXORDIUM like 5 (EXL5); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 1 (TAIR:AT2G35150.1); Has 402 Blast hits to 401 proteins in 25 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;EXORDIUM like 5 transcript=eq;prot=eq; - 2 No
AT2G35150 ath EXORDIUM like 1 (EXL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 396 Blast hits to 396 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;EXORDIUM like 1 transcript=eq;prot=eq; - 2 No
AT3G02970 ath EXORDIUM like 6 (EXL6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 398; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;EXORDIUM like 6 transcript=eq;prot=eq; - 3 No
AT4G08950 ath EXORDIUM (EXO); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: Phosphate-responsive 1 family protein (TAIR:AT1G35140.1); Has 398 Blast hits to 398 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Phosphate-responsive 1 family protein transcript=eq;prot=eq; + 4 No
AT5G09440 ath EXORDIUM like 4 (EXL4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 2 (TAIR:AT5G64260.1); Has 396 Blast hits to 396 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;EXORDIUM like 4 transcript=eq;prot=eq; + 5 No
AT5G51550 ath EXORDIUM like 3 (EXL3); CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 398 Blast hits to 397 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;EXORDIUM like 3 transcript=eq;prot=eq; - 5 No
AT5G64260 ath EXORDIUM like 2 (EXL2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 4 (TAIR:AT5G09440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;EXORDIUM like 2 transcript=eq;prot=eq; + 5 No
BD1G26950 bdi pid=Bradi1g26950.1;tid=Bradi1g26950.1;GeneName=Bradi1g26950;transcript=eq;prot=eq - Bd1 No
BD1G45572 bdi pid=Bradi1g45572.1;tid=Bradi1g45572.1;GeneName=Bradi1g45572;transcript=eq;prot=eq - Bd1 No
BD1G45580 bdi pid=Bradi1g45580.1;tid=Bradi1g45580.1;GeneName=Bradi1g45580;transcript=eq;prot=eq + Bd1 No
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