Gene family  

Sub-families
ORTHO002991 (30 genes in 21 species)
ORTHO004988 (26 genes in 22 species)
ORTHO007042 (23 genes in 14 species)
View all sub-families (18)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (17 genes)
ath
Arabidopsis thaliana (9 genes)
bdi
Brachypodium distachyon (6 genes)
cpa
Carica papaya (10 genes)
cre
Chlamydomonas reinhardtii (5 genes)
fve
Fragaria vesca (9 genes)
gma
Glycine max (18 genes)
lja
Lotus japonicus (17 genes)
mdo
Malus domestica (27 genes)
mes
Manihot esculenta (14 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (7 genes)
olu
Ostreococcus lucimarinus (3 genes)
osa
Oryza sativa ssp. japonica (6 genes)
osaindica
Oryza sativa ssp. indica (9 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (9 genes)
ptr
Populus trichocarpa (19 genes)
rco
Ricinus communis (11 genes)
sbi
Sorghum bicolor (3 genes)
smo
Selaginella moellendorffii (10 genes)
tca
Theobroma cacao (12 genes)
vca
Volvox carteri (4 genes)
vvi
Vitis vinifera (13 genes)
zma
Zea mays (8 genes)



The gene family HOM000362 has 249 genes in 25 species (26 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 13, showing 20 records out of 249 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G25540 aly name=Al_scaffold_0001_2487;pid=880720;prot=eq;tid=912233 + scaffold_1 No
AL1G42190 aly name=scaffold_104468.1;pid=891674;prot=eq;tid=923187 + scaffold_1 No
AL2G07510 aly name=fgenesh2_kg.2__558__AT1G58180.2;pid=475428;prot=eq;tid=475428 - scaffold_2 No
AL2G12650 aly name=scaffold_201279.1;pid=894205;prot=eq;tid=925718 + scaffold_2 No
AL2G18920 aly name=fgenesh2_kg.2__1291__AT1G70410.2;pid=476161;prot=eq;tid=476161 - scaffold_2 No
AL3G00620 aly name=fgenesh1_pg.C_scaffold_3000057;pid=340294;prot=eq;tid=340294 + scaffold_3 No
AL3G00630 aly name=fgenesh2_kg.3__72__AT3G01500.2;pid=477371;prot=eq;tid=477371 + scaffold_3 No
AL3G11350 aly name=fgenesh2_kg.3__1136__AT3G10940.1;pid=478435;prot=eq;tid=478435 - scaffold_3 No
AL3G33970 aly name=scaffold_303621.1;pid=899651;prot=eq;tid=931164 + scaffold_3 No
AL3G34410 aly name=Al_scaffold_0003_3347;pid=874706;prot=eq;tid=906219 + scaffold_3 Yes
AL4G07050 aly name=scaffold_400725.1;pid=901224;prot=eq;tid=932737 + scaffold_4 No
AL5G10600 aly name=scaffold_501093.1;pid=905389;prot=eq;tid=936902 - scaffold_5 No
AL5G21930 aly name=fgenesh2_kg.5__1574__AT3G52180.1;pid=485582;prot=eq;tid=485582 - scaffold_5 No
AL5G22440 aly name=fgenesh1_pg.C_scaffold_5001745;pid=348353;prot=eq;tid=348353 + scaffold_5 Yes
AL6G14530 aly name=fgenesh2_kg.6__1453__AT5G14740.2;pid=488319;prot=eq;tid=488319 + scaffold_6 No
AL7G07620 aly name=scaffold_700799.1;pid=913057;prot=eq;tid=944570 - scaffold_7 No
AL8G03040 aly name=scaffold_800318.1;pid=916918;prot=eq;tid=948431 - scaffold_8 No
AT1G23730 ath beta carbonic anhydrase 3 (BCA3); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 4 (TAIR:AT1G70410.1); Has 5075 Blast hits to 5060 proteins in 1504 species: Archae - 26; Bacteria - 3914; Metazoa - 59; Fungi - 205; Plants - 361; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink).;beta carbonic anhydrase 3 transcript=eq;prot=eq; + 1 No
AT1G58180 ath beta carbonic anhydrase 6 (BCA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 5 (TAIR:AT4G33580.1); Has 5080 Blast hits to 5063 proteins in 1507 species: Archae - 55; Bacteria - 3884; Metazoa - 56; Fungi - 211; Plants - 357; Viruses - 0; Other Eukaryotes - 517 (source: NCBI BLink).;beta carbonic anhydrase 6 transcript=eq;prot=eq; - 1 No
AT1G70410 ath Encodes a putative beta-carbonic anhydrase betaCA4. Together with betaCA1 (At3g01500) regulates CO2-controlled stomatal movements in guard cells.;beta carbonic anhydrase 4 transcript=eq;prot=eq; - 1 No
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