Gene family 
- Id
- HOM000352
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO000305 (70 genes in 25 species)
ORTHO007864 (22 genes in 20 species)
ORTHO008204 (22 genes in 19 species)
View all sub-families (13)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (9 genes)
- ath
- Arabidopsis thaliana (9 genes)
- bdi
- Brachypodium distachyon (5 genes)
- cpa
- Carica papaya (9 genes)
- cre
- Chlamydomonas reinhardtii (5 genes)
- fve
- Fragaria vesca (13 genes)
- gma
- Glycine max (19 genes)
- lja
- Lotus japonicus (8 genes)
- mdo
- Malus domestica (35 genes)
- mes
- Manihot esculenta (13 genes)
- mrcc299
- Micromonas sp. RCC299 (5 genes)
- mtr
- Medicago truncatula (11 genes)
- olu
- Ostreococcus lucimarinus (4 genes)
- osa
- Oryza sativa ssp. japonica (7 genes)
- osaindica
- Oryza sativa ssp. indica (8 genes)
- ota
- Ostreococcus tauri (3 genes)
- ppa
- Physcomitrella patens (11 genes)
- ptr
- Populus trichocarpa (14 genes)
- rco
- Ricinus communis (12 genes)
- sbi
- Sorghum bicolor (8 genes)
- smo
- Selaginella moellendorffii (8 genes)
- tca
- Theobroma cacao (13 genes)
- vca
- Volvox carteri (4 genes)
- vvi
- Vitis vinifera (11 genes)
- zma
- Zea mays (10 genes)
The gene family HOM000352 has 254 genes in 25 species (38 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000352
Page 1 of 13, showing 20 records out of 254 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G15370 | aly | name=scaffold_101633.1;pid=888839;prot=eq;tid=920352 | + | scaffold_1 | No | |
| AL3G08640 | aly | name=fgenesh2_kg.3__858__AT3G08580.2;pid=478157;prot=eq;tid=478157 | - | scaffold_3 | No | |
| AL3G41540 | aly | name=Al_scaffold_0003_4008;pid=875367;prot=eq;tid=906880 | + | scaffold_3 | Yes | |
| AL5G21550 | aly | name=scaffold_502245.1;pid=906541;prot=eq;tid=938054 | + | scaffold_5 | No | |
| AL6G13220 | aly | name=fgenesh2_kg.6__1303__AT5G13490.1;pid=488169;prot=eq;tid=488169 | + | scaffold_6 | No | |
| AL6G17270 | aly | name=fgenesh2_kg.6__1739__AT5G17400.1;pid=488605;prot=eq;tid=488605 | - | scaffold_6 | No | |
| AL7G13450 | aly | name=fgenesh2_kg.7__1367__AT4G28390.1;pid=491934;prot=eq;tid=491934 | + | scaffold_7 | No | |
| AL7G15870 | aly | name=fgenesh2_kg.7__1627__AT4G26180.1;pid=492194;prot=eq;tid=492194 | + | scaffold_7 | No | |
| AL8G22000 | aly | name=fgenesh2_kg.8__1550__AT5G56450.1;pid=495734;prot=eq;tid=495734 | - | scaffold_8 | No | |
| AT1G14560 | ath | Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: endomembrane system, mitochondrial inner membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Graves disease carrier protein (InterPro:IPR002167); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT4G26180.1); Has 25798 Blast hits to 13799 proteins in 460 species: Archae - 0; Bacteria - 2; Metazoa - 10868; Fungi - 7493; Plants - 4688; Viruses - 0; Other Eukaryotes - 2747 (source: NCBI BLink).;Mitochondrial substrate carrier family protein | transcript=eq;prot=eq; | + | 1 | No |
| AT2G20635 | ath | ATP binding;protein kinases;protein serine/threonine kinases; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Mad3/BUB1 homology region 1 (InterPro:IPR013212), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (TAIR:AT2G33560.1); Has 7386 Blast hits to 7115 proteins in 591 species: Archae - 30; Bacteria - 832; Metazoa - 2305; Fungi - 1186; Plants - 1328; Viruses - 3; Other Eukaryotes - 1702 (source: NCBI BLink).;ATP binding;protein kinases;protein serine/threonine kinases | transcript=eq;prot=eq; | + | 2 | Yes |
| AT3G08580 | ath | mitochondrial ADP/ATP carrier;ADP/ATP carrier 1 | transcript=eq;prot=eq; | - | 3 | No |
| AT3G51870 | ath | Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, response to nematode; LOCATED IN: mitochondrial inner membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: thylakoid ATP/ADP carrier (TAIR:AT5G01500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Mitochondrial substrate carrier family protein | transcript=eq;prot=eq; | + | 3 | No |
| AT4G26180 | ath | Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G14560.1); Has 27152 Blast hits to 14144 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 12042; Fungi - 7753; Plants - 4485; Viruses - 3; Other Eukaryotes - 2869 (source: NCBI BLink).;Mitochondrial substrate carrier family protein | transcript=eq;prot=eq; | - | 4 | No |
| AT4G28390 | ath | Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).;ADP/ATP carrier 3 | transcript=eq;prot=eq; | - | 4 | No |
| AT5G13490 | ath | Encodes mitochondrial ADP/ATP carrier;ADP/ATP carrier 2 | transcript=eq;prot=eq; | + | 5 | No |
| AT5G17400 | ath | This gene is predicted to encode an ER-localized adenine nucleotide transporter with six putative transmembrane helices. It appears to act as a ATP:ADP antiporter when expressed in E.coli plasma membranes. Transcript levels for several ER-localized chaperones (e.g. BIP1/2) and other ATP-requiring ER proteins (e.g. CPK2) are reduced in er-ant1 knock-out lines, suggesting a lack of adequate ATP transport into the ER in these mutants. They also have reduced seed oil and seed protein levels.;endoplasmic reticulum-adenine nucleotide transporter 1 | transcript=eq;prot=eq; | - | 5 | No |
| AT5G56450 | ath | Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 1 (TAIR:AT3G08580.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Mitochondrial substrate carrier family protein | transcript=eq;prot=eq; | - | 5 | No |
| BD1G26580 | bdi | CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed, subfamily KIN1/SNF1/Nim1_like(CAMK_2) | pid=Bradi1g26580.1;tid=Bradi1g26580.1;GeneName=Bradi1g26580;transcript=eq;prot=eq | - | Bd1 | Yes |
| BD1G29260 | bdi | adenine transmembrane transporter activity, ATP:ADP antiporter activity, adenine nucleotide transmembrane transporter activity (Blast2GO) | pid=Bradi1g29260.1;tid=Bradi1g29260.1;GeneName=Bradi1g29260;transcript=eq;prot=eq | + | Bd1 | No |