Gene family  

Sub-families
ORTHO002806 (31 genes in 21 species)
ORTHO005891 (25 genes in 19 species)
ORTHO005928 (25 genes in 18 species)
View all sub-families (23)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (15 genes)
ath
Arabidopsis thaliana (13 genes)
bdi
Brachypodium distachyon (9 genes)
cpa
Carica papaya (11 genes)
cre
Chlamydomonas reinhardtii (5 genes)
fve
Fragaria vesca (7 genes)
gma
Glycine max (24 genes)
lja
Lotus japonicus (11 genes)
mdo
Malus domestica (28 genes)
mes
Manihot esculenta (13 genes)
mrcc299
Micromonas sp. RCC299 (6 genes)
mtr
Medicago truncatula (9 genes)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (9 genes)
osaindica
Oryza sativa ssp. indica (13 genes)
ota
Ostreococcus tauri (6 genes)
ppa
Physcomitrella patens (7 genes)
ptr
Populus trichocarpa (13 genes)
rco
Ricinus communis (7 genes)
sbi
Sorghum bicolor (12 genes)
smo
Selaginella moellendorffii (8 genes)
tca
Theobroma cacao (13 genes)
vca
Volvox carteri (4 genes)
vvi
Vitis vinifera (8 genes)
zma
Zea mays (13 genes)



The gene family HOM000328 has 266 genes in 25 species (45 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 14, showing 20 records out of 266 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G10410 aly name=scaffold_76200001.1;pid=920949;prot=eq;tid=952462 + scaffold_762 No
AL2G01660 aly name=fgenesh2_kg.2__137__AT1G63460.1;pid=475007;prot=eq;tid=475007 - scaffold_2 No
AL4G06030 aly name=scaffold_400619.1;pid=901118;prot=eq;tid=932631 + scaffold_4 No
AL4G16490 aly name=scaffold_401693.1;pid=902192;prot=eq;tid=933705 - scaffold_4 No
AL4G30780 aly name=fgenesh2_kg.4__2502__AT2G43350.1;pid=483442;prot=eq;tid=483442 - scaffold_4 No
AL4G36370 aly name=fgenesh2_kg.4__3066__AT2G48160.1;pid=484006;prot=eq;tid=484006 + scaffold_4 No
AL4G36380 aly name=fgenesh2_kg.4__3067__AT2G48150.1;pid=484007;prot=eq;tid=484007 + scaffold_4 No
AL5G34190 aly name=fgenesh2_kg.5__2803__AT3G63070.1;pid=486811;prot=eq;tid=486811 + scaffold_5 No
AL5G34200 aly name=fgenesh1_pm.C_scaffold_5002277;pid=324733;prot=eq;tid=324733 + scaffold_5 No
AL6G07950 aly name=fgenesh2_kg.6__791__AT5G08230.1;pid=487657;prot=eq;tid=487657 - scaffold_6 No
AL6G10560 aly name=scaffold_601098.1;pid=909041;prot=eq;tid=940554 - scaffold_6 Yes
AL6G22900 aly name=fgenesh2_kg.6__2305__AT5G23150.1;pid=489171;prot=eq;tid=489171 + scaffold_6 No
AL6G34470 aly name=fgenesh2_kg.6__3116__AT4G11600.1;pid=489982;prot=eq;tid=489982 - scaffold_6 No
AL7G09700 aly name=fgenesh1_pm.C_scaffold_7000769;pid=328542;prot=eq;tid=328542 - scaffold_7 No
AL7G26890 aly name=scaffold_702857.1;pid=915115;prot=eq;tid=946628 + scaffold_7 Yes
AT1G63460 ath glutathione peroxidase 8 (GPX8); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 6 (TAIR:AT4G11600.1); Has 7264 Blast hits to 7263 proteins in 1725 species: Archae - 2; Bacteria - 3448; Metazoa - 795; Fungi - 210; Plants - 387; Viruses - 8; Other Eukaryotes - 2414 (source: NCBI BLink).;glutathione peroxidase 8 transcript=eq;prot=eq; + 1 No
AT2G25080 ath Encodes glutathione peroxidase.;glutathione peroxidase 1 transcript=eq;prot=eq; + 2 No
AT2G31570 ath glutathione peroxidase GPx;glutathione peroxidase 2 transcript=eq;prot=eq; - 2 No
AT2G43350 ath Glutathione peroxidase. Functions as both a redox transducer and a scavenger in abscisic acid and drought stress responses. Interacts with ABI2 and ABI1.;glutathione peroxidase 3 transcript=eq;prot=eq; - 2 No
AT2G48150 ath Encodes glutathione peroxidase.;glutathione peroxidase 4 transcript=eq;prot=eq; - 2 No
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