Gene family  

Sub-families
ORTHO000036 (194 genes in 23 species)
ORTHO019387 (6 genes in 3 species)
ORTHO019949 (6 genes in 4 species)
View all sub-families (9)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (5 genes)
ath
Arabidopsis thaliana (12 genes)
bdi
Brachypodium distachyon (11 genes)
cpa
Carica papaya (9 genes)
cre
Chlamydomonas reinhardtii (3 genes)
fve
Fragaria vesca (11 genes)
gma
Glycine max (25 genes)
lja
Lotus japonicus (19 genes)
mdo
Malus domestica (36 genes)
mes
Manihot esculenta (14 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (6 genes)
olu
Ostreococcus lucimarinus (2 genes)
osa
Oryza sativa ssp. japonica (11 genes)
osaindica
Oryza sativa ssp. indica (17 genes)
ota
Ostreococcus tauri (2 genes)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (16 genes)
rco
Ricinus communis (9 genes)
sbi
Sorghum bicolor (14 genes)
smo
Selaginella moellendorffii (2 genes)
tca
Theobroma cacao (9 genes)
vca
Volvox carteri (3 genes)
vvi
Vitis vinifera (13 genes)
zma
Zea mays (17 genes)



The gene family HOM000314 has 272 genes in 25 species (2 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 14, showing 20 records out of 272 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL3G40790 aly name=fgenesh2_kg.3__3537__AT2G18960.1;pid=480836;prot=eq;tid=480836 - scaffold_3 No
AL5G10480 aly name=fgenesh1_pm.C_scaffold_5000607;pid=323063;prot=eq;tid=323063 + scaffold_5 No
AL5G16740 aly name=Al_scaffold_0005_1603;pid=866124;prot=eq;tid=897637 + scaffold_5 No
AL6G34820 aly name=fgenesh1_pm.C_scaffold_6002529;pid=327309;prot=eq;tid=327309 + scaffold_6 No
AL8G29150 aly name=scaffold_802942.1;pid=919542;prot=eq;tid=951055 + scaffold_8 No
AT1G17260 ath belongs to H+-APTase gene family, involved in proanthocyanidin biosynthesis, disturbs the vacuolar biogenesis and acidification process;autoinhibited H(+)-ATPase isoform 10 transcript=eq;prot=eq; + 1 No
AT1G80660 ath H(+)-ATPase 9 (HA9); FUNCTIONS IN: hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: proton transport; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 8 (TAIR:AT3G42640.1); Has 36928 Blast hits to 32596 proteins in 3160 species: Archae - 699; Bacteria - 23609; Metazoa - 3886; Fungi - 2415; Plants - 1876; Viruses - 3; Other Eukaryotes - 4440 (source: NCBI BLink).;H(+)-ATPase 9 transcript=eq;prot=eq; - 1 No
AT2G07560 ath H(+)-ATPase 6 (HA6); FUNCTIONS IN: protein binding, ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 8 (TAIR:AT3G42640.1); Has 37689 Blast hits to 32994 proteins in 3204 species: Archae - 723; Bacteria - 24193; Metazoa - 4037; Fungi - 2434; Plants - 1911; Viruses - 3; Other Eukaryotes - 4388 (source: NCBI BLink).;H(+)-ATPase 6 transcript=eq;prot=eq; - 2 No
AT2G18960 ath Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA.;H(+)-ATPase 1 transcript=eq;prot=eq; + 2 No
AT2G24520 ath H(+)-ATPase 5 (HA5); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 2 (TAIR:AT4G30190.1); Has 37354 Blast hits to 32806 proteins in 3183 species: Archae - 691; Bacteria - 24060; Metazoa - 3886; Fungi - 2499; Plants - 1868; Viruses - 3; Other Eukaryotes - 4347 (source: NCBI BLink).;H(+)-ATPase 5 transcript=eq;prot=eq; + 2 No
AT3G42640 ath H(+)-ATPase 8 (HA8); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 6 (TAIR:AT2G07560.1); Has 37108 Blast hits to 32939 proteins in 3205 species: Archae - 721; Bacteria - 23855; Metazoa - 3927; Fungi - 2384; Plants - 1873; Viruses - 3; Other Eukaryotes - 4345 (source: NCBI BLink).;H(+)-ATPase 8 transcript=eq;prot=eq; + 3 No
AT3G47950 ath mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase;H(+)-ATPase 4 transcript=eq;prot=eq; + 3 No
AT3G60330 ath H(+)-ATPase 7 (HA7); FUNCTIONS IN: hydrogen-exporting ATPase activity, phosphorylative mechanism; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 11 (TAIR:AT5G62670.1); Has 36630 Blast hits to 33048 proteins in 3192 species: Archae - 688; Bacteria - 23362; Metazoa - 3842; Fungi - 2517; Plants - 1863; Viruses - 3; Other Eukaryotes - 4355 (source: NCBI BLink).;H(+)-ATPase 7 transcript=eq;prot=eq; + 3 No
AT4G11730 ath Cation transporter/ E1-E2 ATPase family protein; FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, ATP biosynthetic process; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type cation exchange, alpha subunit (InterPro:IPR006069), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 3 (TAIR:AT5G57350.2); Has 44930 Blast hits to 32175 proteins in 3165 species: Archae - 885; Bacteria - 29187; Metazoa - 4916; Fungi - 3187; Plants - 2417; Viruses - 6; Other Eukaryotes - 4332 (source: NCBI BLink).;Cation transporter/ E1-E2 ATPase family protein transcript=eq;prot=eq; + 4 No
AT4G30190 ath belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. has two autoinhibitory regions within the C-terminal dom;H(+)-ATPase 2 transcript=eq;prot=eq; - 4 No
AT5G57350 ath member of Plasma membrane H+-ATPase family;H(+)-ATPase 3 transcript=eq;prot=eq; - 5 No
AT5G62670 ath H(+)-ATPase 11 (HA11); FUNCTIONS IN: ATPase activity; INVOLVED IN: cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, plasma-membrane proton-efflux (InterPro:IPR006534), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: H(+)-ATPase 4 (TAIR:AT3G47950.1); Has 36311 Blast hits to 32678 proteins in 3159 species: Archae - 691; Bacteria - 22958; Metazoa - 3912; Fungi - 2478; Plants - 1926; Viruses - 3; Other Eukaryotes - 4343 (source: NCBI BLink).;H(+)-ATPase 11 transcript=eq;prot=eq; + 5 No
BD1G12117 bdi pid=Bradi1g12117.1;tid=Bradi1g12117.1;GeneName=Bradi1g12117;transcript=eq;prot=eq - Bd1 No
BD1G47550 bdi Autoinhibited H+ P-type ATPase subfamily P3 Cluster 4 from PMID: 12805592. pid=Bradi1g47550.1;tid=Bradi1g47550.1;GeneName=Bradi1g47550;Name=BdAHA10;transcript=eq;prot=eq + Bd1 No
BD1G54847 bdi pid=Bradi1g54847.1;tid=Bradi1g54847.1;GeneName=Bradi1g54847;transcript=eq;prot=eq - Bd1 No
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