Gene family 
- Id
- HOM000303
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO001728 (36 genes in 18 species)
ORTHO003829 (28 genes in 18 species)
ORTHO007982 (22 genes in 17 species)
View all sub-families (25)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (17 genes)
- ath
- Arabidopsis thaliana (16 genes)
- bdi
- Brachypodium distachyon (12 genes)
- cpa
- Carica papaya (12 genes)
- fve
- Fragaria vesca (11 genes)
- gma
- Glycine max (31 genes)
- lja
- Lotus japonicus (9 genes)
- mdo
- Malus domestica (22 genes)
- mes
- Manihot esculenta (16 genes)
- mtr
- Medicago truncatula (12 genes)
- osa
- Oryza sativa ssp. japonica (15 genes)
- osaindica
- Oryza sativa ssp. indica (15 genes)
- ppa
- Physcomitrella patens (6 genes)
- ptr
- Populus trichocarpa (18 genes)
- rco
- Ricinus communis (9 genes)
- sbi
- Sorghum bicolor (10 genes)
- smo
- Selaginella moellendorffii (3 genes)
- tca
- Theobroma cacao (11 genes)
- vvi
- Vitis vinifera (13 genes)
- zma
- Zea mays (20 genes)
The gene family HOM000303 has 278 genes in 20 species (10 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000303
Page 1 of 14, showing 20 records out of 278 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL2G00950 | aly | name=fgenesh2_kg.2__76__AT1G64090.1;pid=474946;prot=eq;tid=474946 | - | scaffold_2 | No | |
| AL2G16350 | aly | name=fgenesh1_pm.C_scaffold_2000873;pid=315840;prot=eq;tid=315840 | + | scaffold_2 | No | |
| AL3G10510 | aly | name=fgenesh2_kg.3__1055__AT3G10260.1;pid=478354;prot=eq;tid=478354 | - | scaffold_3 | No | |
| AL3G11320 | aly | name=Al_scaffold_0003_1105;pid=872464;prot=eq;tid=903977 | - | scaffold_3 | No | |
| AL3G19760 | aly | name=fgenesh2_kg.3__2025__AT3G18260.1;pid=479324;prot=eq;tid=479324 | - | scaffold_3 | No | |
| AL3G21020 | aly | name=Al_scaffold_0003_2054;pid=873413;prot=eq;tid=904926 | + | scaffold_3 | No | |
| AL3G34860 | aly | name=fgenesh2_kg.3__3095__AT2G15280.1;pid=480394;prot=eq;tid=480394 | + | scaffold_3 | No | |
| AL4G03400 | aly | name=fgenesh1_pg.C_scaffold_4000264;pid=343922;prot=eq;tid=343922 | + | scaffold_4 | No | |
| AL4G34160 | aly | name=scaffold_403570.1;pid=904069;prot=eq;tid=935582 | + | scaffold_4 | No | |
| AL5G00180 | aly | name=fgenesh2_kg.5__25__AT2G01240.1;pid=484033;prot=eq;tid=484033 | - | scaffold_5 | No | |
| AL5G24160 | aly | name=scaffold_502519.1;pid=906815;prot=eq;tid=938328 | - | scaffold_5 | No | |
| AL5G32290 | aly | name=fgenesh2_kg.5__2634__AT3G61560.1;pid=486642;prot=eq;tid=486642 | + | scaffold_5 | No | |
| AL6G33780 | aly | name=scaffold_603504.1;pid=911447;prot=eq;tid=942960 | - | scaffold_6 | No | |
| AL6G40360 | aly | name=fgenesh2_kg.6__3582__AT4G01230.1;pid=490448;prot=eq;tid=490448 | + | scaffold_6 | No | |
| AL7G18560 | aly | name=scaffold_701976.1;pid=914234;prot=eq;tid=945747 | - | scaffold_7 | No | |
| AL7G27490 | aly | name=scaffold_702915.1;pid=915173;prot=eq;tid=946686 | + | scaffold_7 | Yes | |
| AL7G36050 | aly | name=fgenesh2_kg.7__3261__AT5G41600.1;pid=493828;prot=eq;tid=493828 | - | scaffold_7 | No | |
| AT1G64090 | ath | Reticulan like protein B3 (RTNLB3); CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 3 (TAIR:AT5G41600.1).;Reticulan like protein B3 | transcript=eq;prot=eq; | + | 1 | No |
| AT1G68230 | ath | Reticulon family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G46170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Reticulon family protein | transcript=eq;prot=eq; | + | 1 | No |
| AT2G01240 | ath | Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: VIRB2-interacting protein 2 (TAIR:AT4G11220.1); Has 375 Blast hits to 375 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 5; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Reticulon family protein | transcript=eq;prot=eq; | - | 2 | No |