Gene family  

Sub-families
ORTHO003269 (29 genes in 19 species)
ORTHO006394 (24 genes in 18 species)
ORTHO007299 (23 genes in 17 species)
View all sub-families (25)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (14 genes)
ath
Arabidopsis thaliana (14 genes)
bdi
Brachypodium distachyon (11 genes)
cpa
Carica papaya (10 genes)
cre
Chlamydomonas reinhardtii (5 genes)
fve
Fragaria vesca (11 genes)
gma
Glycine max (33 genes)
lja
Lotus japonicus (13 genes)
mdo
Malus domestica (24 genes)
mes
Manihot esculenta (16 genes)
mrcc299
Micromonas sp. RCC299 (3 genes)
mtr
Medicago truncatula (14 genes)
olu
Ostreococcus lucimarinus (3 genes)
osa
Oryza sativa ssp. japonica (11 genes)
osaindica
Oryza sativa ssp. indica (12 genes)
ota
Ostreococcus tauri (3 genes)
ppa
Physcomitrella patens (5 genes)
ptr
Populus trichocarpa (16 genes)
rco
Ricinus communis (9 genes)
sbi
Sorghum bicolor (12 genes)
tca
Theobroma cacao (12 genes)
vca
Volvox carteri (3 genes)
vvi
Vitis vinifera (9 genes)
zma
Zea mays (18 genes)



The gene family HOM000300 has 281 genes in 24 species (14 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 15, showing 20 records out of 281 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G02880 aly name=Al_scaffold_0001_275;pid=878508;prot=eq;tid=910021 - scaffold_1 No
AL1G17090 aly name=fgenesh1_pg.C_scaffold_1001466;pid=334901;prot=eq;tid=334901 + scaffold_1 No
AL2G28720 aly name=fgenesh2_kg.2__2267__AT1G79630.1;pid=477137;prot=eq;tid=477137 - scaffold_2 No
AL3G01940 aly name=fgenesh2_kg.3__218__AT3G02750.2;pid=477517;prot=eq;tid=477517 - scaffold_3 No
AL3G05590 aly name=fgenesh2_kg.3__557__AT3G05640.2;pid=477856;prot=eq;tid=477856 - scaffold_3 No
AL3G06330 aly name=fgenesh2_kg.3__628__AT3G06270.1;pid=477927;prot=eq;tid=477927 + scaffold_3 No
AL3G18000 aly name=fgenesh2_kg.3__1847__AT3G16800.2;pid=479146;prot=eq;tid=479146 + scaffold_3 No
AL3G36000 aly name=fgenesh2_kg.3__3166__AT2G20050.1;pid=480465;prot=eq;tid=480465 + scaffold_3 No
AL6G00350 aly name=fgenesh2_kg.6__35__AT5G01700.2;pid=486901;prot=eq;tid=486901 + scaffold_6 No
AL6G26260 aly name=fgenesh1_pm.C_scaffold_6002075;pid=326855;prot=eq;tid=326855 - scaffold_6 No
AL6G27260 aly name=fgenesh2_kg.6__2673__AT5G27930.2;pid=489539;prot=eq;tid=489539 + scaffold_6 No
AL6G37840 aly name=fgenesh2_kg.6__3355__AT4G03415.1;pid=490221;prot=eq;tid=490221 + scaffold_6 No
AL7G08360 aly name=fgenesh1_pm.C_scaffold_7000664;pid=328437;prot=eq;tid=328437 + scaffold_7 No
AL7G33270 aly name=fgenesh2_kg.7__3095__AT5G36250.1;pid=493662;prot=eq;tid=493662 + scaffold_7 No
AT1G03590 ath Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G03415.2); Has 5799 Blast hits to 5797 proteins in 294 species: Archae - 0; Bacteria - 4; Metazoa - 1418; Fungi - 691; Plants - 2505; Viruses - 5; Other Eukaryotes - 1176 (source: NCBI BLink).;Protein phosphatase 2C family protein transcript=eq;prot=eq; - 1 No
AT1G16220 ath Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G79630.1); Has 5547 Blast hits to 5545 proteins in 292 species: Archae - 2; Bacteria - 12; Metazoa - 1332; Fungi - 643; Plants - 2421; Viruses - 5; Other Eukaryotes - 1132 (source: NCBI BLink).;Protein phosphatase 2C family protein transcript=eq;prot=eq; + 1 No
AT1G79630 ath Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G16220.1); Has 5543 Blast hits to 5523 proteins in 290 species: Archae - 2; Bacteria - 8; Metazoa - 1342; Fungi - 594; Plants - 2451; Viruses - 5; Other Eukaryotes - 1141 (source: NCBI BLink).;Protein phosphatase 2C family protein transcript=eq;prot=eq; - 1 No
AT2G20050 ath protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; FUNCTIONS IN: cAMP-dependent protein kinase regulator activity, protein kinase activity, protein serine/threonine phosphatase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein amino acid dephosphorylation, N-terminal protein myristoylation, regulation of protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), cAMP/cGMP-dependent protein kinase (InterPro:IPR002373), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein kinase, catalytic domain (InterPro:IPR000719), Cyclic nucleotide-binding-like (InterPro:IPR018490), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G06270.1); Has 64548 Blast hits to 63479 proteins in 2268 species: Archae - 40; Bacteria - 8440; Metazoa - 24888; Fungi - 7627; Plants - 9963; Viruses - 207; Other Eukaryotes - 13383 (source: NCBI BLink).;protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases transcript=eq;prot=eq; - 2 No
AT3G02750 ath Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G36250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Protein phosphatase 2C family protein transcript=eq;prot=eq; - 3 No
AT3G05640 ath Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: response to water deprivation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G27930.2); Has 5684 Blast hits to 5679 proteins in 292 species: Archae - 2; Bacteria - 4; Metazoa - 1387; Fungi - 671; Plants - 2430; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink).;Protein phosphatase 2C family protein transcript=eq;prot=eq; - 3 No
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