Gene family  

Sub-families
ORTHO002131 (33 genes in 19 species)
ORTHO011725 (17 genes in 1 species)
ORTHO017167 (8 genes in 3 species)
View all sub-families (47)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (15 genes)
ath
Arabidopsis thaliana (13 genes)
bdi
Brachypodium distachyon (24 genes)
cpa
Carica papaya (3 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (23 genes)
gma
Glycine max (2 genes)
lja
Lotus japonicus (45 genes)
mdo
Malus domestica (41 genes)
mes
Manihot esculenta (3 genes)
mtr
Medicago truncatula (29 genes)
osa
Oryza sativa ssp. japonica (20 genes)
osaindica
Oryza sativa ssp. indica (23 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (8 genes)
rco
Ricinus communis (6 genes)
sbi
Sorghum bicolor (18 genes)
tca
Theobroma cacao (3 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (1 gene)
zma
Zea mays (5 genes)



The gene family HOM000290 has 288 genes in 21 species (8 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 15, showing 20 records out of 288 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G41080 aly name=scaffold_104360.1;pid=891566;prot=eq;tid=923079 + scaffold_1 No
AL2G01010 aly name=Al_scaffold_0002_89;pid=875495;prot=eq;tid=907008 + scaffold_2 Yes
AL2G01030 aly name=scaffold_200106.1;pid=893032;prot=eq;tid=924545 + scaffold_2 No
AL2G01040 aly name=fgenesh2_kg.2__83__AT1G64030.1;pid=474953;prot=eq;tid=474953 + scaffold_2 No
AL2G01050 aly name=fgenesh2_kg.2__84__AT1G64020.1;pid=474954;prot=eq;tid=474954 + scaffold_2 No
AL2G01060 aly name=fgenesh2_kg.2__85__AT1G64010.1;pid=474955;prot=eq;tid=474955 + scaffold_2 No
AL2G01850 aly name=fgenesh2_kg.2__148__AT1G63280.1;pid=475018;prot=eq;tid=475018 - scaffold_2 No
AL2G03350 aly name=fgenesh2_kg.2__257__AT1G62170.1;pid=475127;prot=eq;tid=475127 - scaffold_2 No
AL3G34060 aly name=fgenesh2_kg.3__3049__AT2G14540.1;pid=480348;prot=eq;tid=480348 - scaffold_3 No
AL4G06300 aly name=fgenesh2_kg.4__440__AT2G25240.1;pid=481380;prot=eq;tid=481380 - scaffold_4 No
AL4G08720 aly name=Al_scaffold_0004_844;pid=868681;prot=eq;tid=900194 - scaffold_4 No
AL4G08760 aly name=scaffold_400891.1;pid=901390;prot=eq;tid=932903 - scaffold_4 No
AL5G13280 aly name=scaffold_501375.1;pid=905671;prot=eq;tid=937184 - scaffold_5 No
AL6G31890 aly name=Al_scaffold_0006_3084;pid=863575;prot=eq;tid=895088 - scaffold_6 No
AL6G32050 aly name=scaffold_603318.1;pid=911261;prot=eq;tid=942774 + scaffold_6 No
AT1G47710 ath Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity, cysteine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT3G45220.1); Has 6643 Blast hits to 6565 proteins in 500 species: Archae - 66; Bacteria - 387; Metazoa - 5142; Fungi - 12; Plants - 353; Viruses - 463; Other Eukaryotes - 220 (source: NCBI BLink).;Serine protease inhibitor (SERPIN) family protein transcript=eq;prot=eq; + 1 No
AT1G51330 ath Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: serpin 2 (TAIR:AT2G14540.1); Has 3407 Blast hits to 3397 proteins in 279 species: Archae - 51; Bacteria - 198; Metazoa - 2730; Fungi - 0; Plants - 269; Viruses - 35; Other Eukaryotes - 124 (source: NCBI BLink).;Serine protease inhibitor (SERPIN) family protein transcript=eq;prot=eq; - 1 No
AT1G62160 ath Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT1G62170.2); Has 3694 Blast hits to 3656 proteins in 333 species: Archae - 60; Bacteria - 246; Metazoa - 2628; Fungi - 4; Plants - 325; Viruses - 305; Other Eukaryotes - 126 (source: NCBI BLink).;Serine protease inhibitor (SERPIN) family protein transcript=eq;prot=eq; + 1 No
AT1G62170 ath Serine protease inhibitor (SERPIN) family protein; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: serpin 2 (TAIR:AT2G14540.1).;Serine protease inhibitor (SERPIN) family protein transcript=eq;prot=eq; + 1 No
AT1G63280 ath Serine protease inhibitor (SERPIN) family protein; FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin, plant (InterPro:IPR015554), Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: serpin 2 (TAIR:AT2G14540.1); Has 3663 Blast hits to 3650 proteins in 337 species: Archae - 55; Bacteria - 265; Metazoa - 2866; Fungi - 3; Plants - 271; Viruses - 74; Other Eukaryotes - 129 (source: NCBI BLink).;Serine protease inhibitor (SERPIN) family protein transcript=eq;prot=eq; + 1 No
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