Gene family  

Sub-families
ORTHO000544 (55 genes in 15 species)
ORTHO010438 (19 genes in 14 species)
ORTHO011841 (16 genes in 15 species)
View all sub-families (27)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (10 genes)
ath
Arabidopsis thaliana (14 genes)
bdi
Brachypodium distachyon (10 genes)
cpa
Carica papaya (10 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (16 genes)
gma
Glycine max (18 genes)
lja
Lotus japonicus (19 genes)
mdo
Malus domestica (57 genes)
mes
Manihot esculenta (15 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (10 genes)
osa
Oryza sativa ssp. japonica (12 genes)
osaindica
Oryza sativa ssp. indica (20 genes)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (24 genes)
rco
Ricinus communis (15 genes)
sbi
Sorghum bicolor (12 genes)
smo
Selaginella moellendorffii (1 gene)
tca
Theobroma cacao (13 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (15 genes)
zma
Zea mays (11 genes)



The gene family HOM000267 has 308 genes in 23 species (12 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 16, showing 20 records out of 308 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G27320 aly name=fgenesh2_kg.1__2740__AT1G26320.1;pid=472786;prot=eq;tid=472786 - scaffold_1 No
AL1G43990 aly name=fgenesh1_pg.C_scaffold_1003684;pid=337119;prot=eq;tid=337119 - scaffold_1 No
AL2G11840 aly name=scaffold_201208.1;pid=894134;prot=eq;tid=925647 - scaffold_2 No
AL3G02380 aly name=Al_scaffold_0003_248;pid=871607;prot=eq;tid=903120 - scaffold_3 No
AL5G30430 aly name=fgenesh1_pm.C_scaffold_5001985;pid=324441;prot=eq;tid=324441 - scaffold_5 No
AL6G16820 aly name=Al_scaffold_0006_1605;pid=862096;prot=eq;tid=893609 - scaffold_6 No
AL6G16830 aly name=scaffold_601742.1;pid=909685;prot=eq;tid=941198 - scaffold_6 No
AL6G16840 aly name=scaffold_601743.1;pid=909686;prot=eq;tid=941199 - scaffold_6 No
AL6G16850 aly name=scaffold_601744.1;pid=909687;prot=eq;tid=941200 - scaffold_6 No
AL7G40930 aly name=fgenesh2_kg.7__3615__AT5G37980.1;pid=494182;prot=eq;tid=494182 - scaffold_7 No
AT1G26320 ath Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 15199 Blast hits to 15179 proteins in 1781 species: Archae - 136; Bacteria - 8413; Metazoa - 848; Fungi - 1033; Plants - 583; Viruses - 0; Other Eukaryotes - 4186 (source: NCBI BLink).;Zinc-binding dehydrogenase family protein transcript=eq;prot=eq; + 1 No
AT1G49670 ath molecular function has not been defined. Was shown involved in oxidative stress tolerance.;ARP protein (REF) transcript=eq;prot=eq; - 1 No
AT1G65560 ath Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 16645 Blast hits to 16624 proteins in 1782 species: Archae - 118; Bacteria - 9540; Metazoa - 863; Fungi - 1044; Plants - 588; Viruses - 0; Other Eukaryotes - 4492 (source: NCBI BLink).;Zinc-binding dehydrogenase family protein transcript=eq;prot=eq; - 1 No
AT3G03080 ath Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 15825 Blast hits to 15807 proteins in 1776 species: Archae - 145; Bacteria - 8757; Metazoa - 820; Fungi - 1154; Plants - 597; Viruses - 0; Other Eukaryotes - 4352 (source: NCBI BLink).;Zinc-binding dehydrogenase family protein transcript=eq;prot=eq; - 3 No
AT3G59845 ath Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G17000.1); Has 16333 Blast hits to 16305 proteins in 1827 species: Archae - 109; Bacteria - 9318; Metazoa - 826; Fungi - 1128; Plants - 582; Viruses - 0; Other Eukaryotes - 4370 (source: NCBI BLink).;Zinc-binding dehydrogenase family protein transcript=eq;prot=eq; - 3 No
AT5G16960 ath Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; EXPRESSED IN: leaf whorl, sepal, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G37980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Zinc-binding dehydrogenase family protein transcript=eq;prot=eq; - 5 No
AT5G16970 ath encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls;alkenal reductase transcript=eq;prot=eq; - 5 No
AT5G16980 ath Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress, response to cyclopentenone; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1).;Zinc-binding dehydrogenase family protein transcript=eq;prot=eq; - 5 No
AT5G16990 ath molecular function has not been defined, was shown involved in oxidative stress tolerance.;Zinc-binding dehydrogenase family protein transcript=eq;prot=eq; - 5 No
AT5G17000 ath Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: response to oxidative stress; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Zinc-binding dehydrogenase family protein transcript=eq;prot=eq; - 5 No
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