Gene family 
- Id
- HOM000241
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO000761 (48 genes in 18 species)
ORTHO003388 (29 genes in 15 species)
ORTHO005294 (26 genes in 13 species)
View all sub-families (37)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (12 genes)
- ath
- Arabidopsis thaliana (13 genes)
- bdi
- Brachypodium distachyon (9 genes)
- cpa
- Carica papaya (22 genes)
- fve
- Fragaria vesca (17 genes)
- gma
- Glycine max (34 genes)
- lja
- Lotus japonicus (13 genes)
- mdo
- Malus domestica (32 genes)
- mes
- Manihot esculenta (21 genes)
- mrcc299
- Micromonas sp. RCC299 (1 gene)
- mtr
- Medicago truncatula (32 genes)
- osa
- Oryza sativa ssp. japonica (20 genes)
- osaindica
- Oryza sativa ssp. indica (19 genes)
- ptr
- Populus trichocarpa (17 genes)
- rco
- Ricinus communis (19 genes)
- sbi
- Sorghum bicolor (10 genes)
- tca
- Theobroma cacao (24 genes)
- vvi
- Vitis vinifera (7 genes)
- zma
- Zea mays (8 genes)
The gene family HOM000241 has 330 genes in 19 species (49 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000241
Page 1 of 17, showing 20 records out of 330 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL3G08850 | aly | name=fgenesh2_kg.3__880__AT3G08770.1;pid=478179;prot=eq;tid=478179 | - | scaffold_3 | No | |
| AL3G34720 | aly | name=fgenesh2_kg.3__3087__AT2G15050.1;pid=480386;prot=eq;tid=480386 | + | scaffold_3 | No | |
| AL3G34950 | aly | name=Al_scaffold_0003_3399;pid=874758;prot=eq;tid=906271 | - | scaffold_3 | No | |
| AL3G39430 | aly | name=fgenesh2_kg.3__3446__AT2G18370.1;pid=480745;prot=eq;tid=480745 | + | scaffold_3 | No | |
| AL4G24920 | aly | name=fgenesh2_kg.4__1923__AT2G38540.1;pid=482863;prot=eq;tid=482863 | + | scaffold_4 | No | |
| AL5G21240 | aly | name=fgenesh2_kg.5__1503__AT3G51590.1;pid=485511;prot=eq;tid=485511 | - | scaffold_5 | No | |
| AL5G21250 | aly | name=fgenesh2_kg.5__1504__AT3G51600.1;pid=485512;prot=eq;tid=485512 | - | scaffold_5 | No | |
| AL6G00170 | aly | name=Al_scaffold_0006_17;pid=860508;prot=eq;tid=892021 | - | scaffold_6 | No | |
| AL7G07890 | aly | name=Al_scaffold_0007_744;pid=857245;prot=eq;tid=888758 | - | scaffold_7 | No | |
| AL8G25470 | aly | name=scaffold_802561.1;pid=919161;prot=eq;tid=950674 | - | scaffold_8 | No | |
| AL8G25480 | aly | name=fgenesh2_kg.8__1875__AT5G59320.1;pid=496059;prot=eq;tid=496059 | + | scaffold_8 | No | |
| AL8G25490 | aly | name=Al_scaffold_0008_2426;pid=886162;prot=eq;tid=917675 | + | scaffold_8 | No | |
| AT2G15050 | ath | Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.;lipid transfer protein | transcript=eq;prot=eq; | + | 2 | No |
| AT2G15325 | ath | Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | transcript=eq;prot=eq; | - | 2 | No |
| AT2G18370 | ath | Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | transcript=eq;prot=eq; | + | 2 | No |
| AT2G38530 | ath | Involved in lipid transfer between membranes. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region. Expressed in flower, leaves and siliques but absent in roots. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.;lipid transfer protein 2 | transcript=eq;prot=eq; | + | 2 | No |
| AT2G38540 | ath | Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.;lipid transfer protein 1 | transcript=eq;prot=eq; | + | 2 | No |
| AT3G08770 | ath | Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.;lipid transfer protein 6 | transcript=eq;prot=eq; | - | 3 | No |
| AT3G51590 | ath | Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.;lipid transfer protein 12 | transcript=eq;prot=eq; | - | 3 | No |
| AT3G51600 | ath | Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.;lipid transfer protein 5 | transcript=eq;prot=eq; | - | 3 | No |