Gene family 
- Id
- HOM000232
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO010486 (19 genes in 10 species)
ORTHO011700 (17 genes in 8 species)
ORTHO015050 (11 genes in 4 species)
View all sub-families (48)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (10 genes)
- ath
- Arabidopsis thaliana (9 genes)
- cpa
- Carica papaya (13 genes)
- fve
- Fragaria vesca (46 genes)
- gma
- Glycine max (14 genes)
- lja
- Lotus japonicus (14 genes)
- mdo
- Malus domestica (75 genes)
- mes
- Manihot esculenta (25 genes)
- mtr
- Medicago truncatula (8 genes)
- ptr
- Populus trichocarpa (42 genes)
- rco
- Ricinus communis (41 genes)
- smo
- Selaginella moellendorffii (1 gene)
- tca
- Theobroma cacao (30 genes)
- vvi
- Vitis vinifera (7 genes)
The gene family HOM000232 has 335 genes in 14 species (22 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
- ...the multiple sequence alignment of the homologous gene family.
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
- ...the functional annotation associated with this gene family.
Index of genes with 1 constraints:
- gene family : HOM000232
Page 1 of 17, showing 20 records out of 335 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G28200 | aly | name=fgenesh2_kg.1__2859__AT1G24430.1;pid=472905;prot=eq;tid=472905 | + | scaffold_1 | No | |
| AL1G28210 | aly | name=fgenesh2_kg.1__2860__AT1G24420.1;pid=472906;prot=eq;tid=472906 | - | scaffold_1 | No | |
| AL5G04600 | aly | name=fgenesh2_kg.5__358__AT3G26040.1;pid=484366;prot=eq;tid=484366 | + | scaffold_5 | No | |
| AL5G09560 | aly | name=scaffold_500990.1;pid=905286;prot=eq;tid=936799 | + | scaffold_5 | No | |
| AL6G23790 | aly | name=fgenesh2_kg.6__2389__AT5G23970.1;pid=489255;prot=eq;tid=489255 | + | scaffold_6 | No | |
| AL7G28400 | aly | name=fgenesh2_kg.7__2785__AT4G15400.1;pid=493352;prot=eq;tid=493352 | + | scaffold_7 | No | |
| AL7G28430 | aly | name=scaffold_703016.1;pid=915274;prot=eq;tid=946787 | + | scaffold_7 | No | |
| AL7G29270 | aly | name=fgenesh1_pg.C_scaffold_7002488;pid=355315;prot=eq;tid=355315 | + | scaffold_7 | No | |
| AL8G10090 | aly | name=fgenesh2_kg.8__657__AT5G47950.1;pid=494841;prot=eq;tid=494841 | + | scaffold_8 | No | |
| AL8G10150 | aly | name=scaffold_801032.1;pid=917632;prot=eq;tid=949145 | + | scaffold_8 | No | |
| AT1G24420 | ath | HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G15390.1); Has 2364 Blast hits to 2360 proteins in 171 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 164; Plants - 2198; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein | transcript=eq;prot=eq; | + | 1 | No |
| AT1G24430 | ath | HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G26040.1); Has 2376 Blast hits to 2366 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 27; Plants - 2343; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein | transcript=eq;prot=eq; | - | 1 | No |
| AT3G26040 | ath | HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2415 Blast hits to 2403 proteins in 134 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 58; Plants - 2353; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein | transcript=eq;prot=eq; | + | 3 | No |
| AT3G30280 | ath | HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G15390.1); Has 2342 Blast hits to 2327 proteins in 132 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 49; Plants - 2289; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein | transcript=eq;prot=eq; | + | 3 | No |
| AT4G15390 | ath | HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2282 Blast hits to 2273 proteins in 132 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 35; Plants - 2239; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein | transcript=eq;prot=eq; | - | 4 | No |
| AT4G15400 | ath | HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G47980.1); Has 2123 Blast hits to 2120 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 33; Plants - 2088; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein | transcript=eq;prot=eq; | - | 4 | No |
| AT5G23970 | ath | HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G47980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein | transcript=eq;prot=eq; | + | 5 | No |
| AT5G47950 | ath | HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein | transcript=eq;prot=eq; | - | 5 | No |
| AT5G47980 | ath | HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity, acyltransferase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT4G15400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;HXXXD-type acyl-transferase family protein | transcript=eq;prot=eq; | + | 5 | No |
| CP00016G01240 | cpa | name=evm.TU.supercontig_16.124;pid=evm.TU.supercontig_16.124;prot=eq;transcript=eq | - | supercontig_16 | No |