Gene family  

Sub-families
ORTHO002137 (33 genes in 17 species)
ORTHO003951 (28 genes in 19 species)
ORTHO004992 (26 genes in 18 species)
View all sub-families (37)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (17 genes)
ath
Arabidopsis thaliana (14 genes)
bdi
Brachypodium distachyon (14 genes)
cpa
Carica papaya (11 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (21 genes)
gma
Glycine max (30 genes)
lja
Lotus japonicus (16 genes)
mdo
Malus domestica (52 genes)
mes
Manihot esculenta (23 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (14 genes)
osa
Oryza sativa ssp. japonica (18 genes)
osaindica
Oryza sativa ssp. indica (19 genes)
ppa
Physcomitrella patens (10 genes)
ptr
Populus trichocarpa (24 genes)
rco
Ricinus communis (12 genes)
sbi
Sorghum bicolor (13 genes)
smo
Selaginella moellendorffii (3 genes)
tca
Theobroma cacao (19 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (14 genes)
zma
Zea mays (13 genes)



The gene family HOM000210 has 360 genes in 23 species (34 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 18, showing 20 records out of 360 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G06950 aly name=Al_scaffold_0278_1;pid=856203;prot=eq;tid=887716 - scaffold_278 Yes
AL1G12810 aly name=fgenesh2_kg.1__1348__AT1G12440.1;pid=471394;prot=eq;tid=471394 - scaffold_1 No
AL1G45860 aly name=fgenesh2_kg.1__4188__AT1G51200.1;pid=474234;prot=eq;tid=474234 + scaffold_1 No
AL1G45970 aly name=fgenesh2_kg.1__4194__AT1G51260.1;pid=474240;prot=eq;tid=474240 - scaffold_1 No
AL1G45980 aly name=scaffold_104888.1;pid=892094;prot=eq;tid=923607 - scaffold_1 No
AL2G23890 aly name=fgenesh2_kg.2__1770__AT1G75020.1;pid=476640;prot=eq;tid=476640 + scaffold_2 No
AL3G13060 aly name=fgenesh2_kg.3__1323__AT3G12630.1;pid=478622;prot=eq;tid=478622 + scaffold_3 No
AL3G20450 aly name=fgenesh1_pm.C_scaffold_3001662;pid=318646;prot=eq;tid=318646 - scaffold_3 No
AL4G12660 aly name=scaffold_401279.1;pid=901778;prot=eq;tid=933291 + scaffold_4 No
AL4G21740 aly name=scaffold_402246.1;pid=902745;prot=eq;tid=934258 + scaffold_4 No
AL5G22730 aly name=fgenesh2_kg.5__1644__AT3G52800.1;pid=485652;prot=eq;tid=485652 + scaffold_5 No
AL5G27260 aly name=scaffold_502849.1;pid=907145;prot=eq;tid=938658 - scaffold_5 No
AL5G28140 aly name=scaffold_502939.1;pid=907235;prot=eq;tid=938748 + scaffold_5 No
AL6G35210 aly name=fgenesh2_kg.6__3157__AT4G12040.2;pid=490023;prot=eq;tid=490023 + scaffold_6 No
AL7G16740 aly name=scaffold_701780.1;pid=914038;prot=eq;tid=945551 + scaffold_7 No
AL7G19400 aly name=scaffold_702067.1;pid=914325;prot=eq;tid=945838 + scaffold_7 No
AL7G30220 aly name=scaffold_703210.1;pid=915468;prot=eq;tid=946981 - scaffold_7 No
AT1G12440 ath A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT4G12040.2); Has 1075 Blast hits to 1057 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 452; Fungi - 9; Plants - 482; Viruses - 6; Other Eukaryotes - 126 (source: NCBI BLink).;A20/AN1-like zinc finger family protein transcript=eq;prot=eq; - 1 No
AT1G51200 ath A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT2G36320.1); Has 1055 Blast hits to 1034 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 447; Fungi - 9; Plants - 481; Viruses - 6; Other Eukaryotes - 112 (source: NCBI BLink).;A20/AN1-like zinc finger family protein transcript=eq;prot=eq; + 1 No
AT1G51260 ath ACYL-COA:1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, PUTATIVE SIMILAR TO ACYL-COA:1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE GI:4583544 FROM [BRASSICA NAPUS];lysophosphatidyl acyltransferase 3 transcript=eq;prot=eq; - 1 No
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