Gene family  

Sub-families
ORTHO003490 (29 genes in 20 species)
ORTHO005039 (26 genes in 17 species)
ORTHO005063 (26 genes in 18 species)
View all sub-families (28)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (19 genes)
ath
Arabidopsis thaliana (16 genes)
bdi
Brachypodium distachyon (17 genes)
cpa
Carica papaya (18 genes)
fve
Fragaria vesca (15 genes)
gma
Glycine max (31 genes)
lja
Lotus japonicus (24 genes)
mdo
Malus domestica (38 genes)
mes
Manihot esculenta (25 genes)
mtr
Medicago truncatula (14 genes)
osa
Oryza sativa ssp. japonica (22 genes)
osaindica
Oryza sativa ssp. indica (23 genes)
ppa
Physcomitrella patens (4 genes)
ptr
Populus trichocarpa (25 genes)
rco
Ricinus communis (15 genes)
sbi
Sorghum bicolor (21 genes)
smo
Selaginella moellendorffii (4 genes)
tca
Theobroma cacao (16 genes)
vvi
Vitis vinifera (16 genes)
zma
Zea mays (23 genes)



The gene family HOM000194 has 386 genes in 20 species (28 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 20, showing 20 records out of 386 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G00140 aly name=fgenesh2_kg.1__13__AT1G02110.1;pid=470059;prot=eq;tid=470059 - scaffold_1 No
AL1G21650 aly name=fgenesh1_pm.C_scaffold_1001748;pid=312968;prot=eq;tid=312968 - scaffold_1 No
AL1G23010 aly name=fgenesh2_kg.1__2367__AT1G21740.1;pid=472413;prot=eq;tid=472413 + scaffold_1 No
AL1G47230 aly name=fgenesh2_kg.1__4302__AT1G52320.2;pid=474348;prot=eq;tid=474348 + scaffold_1 No
AL2G26460 aly name=fgenesh2_kg.2__2045__AT1G77500.1;pid=476915;prot=eq;tid=476915 + scaffold_2 No
AL3G31290 aly name=fgenesh1_pg.C_scaffold_3002647;pid=342884;prot=eq;tid=342884 - scaffold_3 Yes
AL3G37830 aly name=fgenesh2_kg.3__3294__AT2G17110.1;pid=480593;prot=eq;tid=480593 - scaffold_3 No
AL3G40650 aly name=fgenesh2_kg.3__3524__AT2G19090.1;pid=480823;prot=eq;tid=480823 + scaffold_3 No
AL4G10670 aly name=fgenesh2_kg.4__652__AT2G27090.1;pid=481592;prot=eq;tid=481592 - scaffold_4 No
AL4G19930 aly name=Al_scaffold_0004_1948;pid=869785;prot=eq;tid=901298 - scaffold_4 No
AL4G32670 aly name=Al_scaffold_0004_3164;pid=871001;prot=eq;tid=902514 - scaffold_4 No
AL5G20920 aly name=fgenesh2_kg.5__1472__AT3G51290.1;pid=485480;prot=eq;tid=485480 + scaffold_5 No
AL5G30950 aly name=fgenesh2_kg.5__2496__AT3G60320.1;pid=486504;prot=eq;tid=486504 - scaffold_5 No
AL6G25830 aly name=scaffold_602678.1;pid=910621;prot=eq;tid=942134 - scaffold_6 No
AL7G01990 aly name=Al_scaffold_0007_186;pid=856687;prot=eq;tid=888200 - scaffold_7 No
AL7G03960 aly name=Al_scaffold_0007_368;pid=856869;prot=eq;tid=888382 - scaffold_7 Yes
AL7G05680 aly name=Al_scaffold_0007_532;pid=857033;prot=eq;tid=888546 + scaffold_7 No
AL7G11480 aly name=fgenesh2_kg.7__1173__AT4G30130.1;pid=491740;prot=eq;tid=491740 - scaffold_7 No
AL8G19740 aly name=scaffold_801977.1;pid=918577;prot=eq;tid=950090 + scaffold_8 No
AT1G02110 ath Protein of unknown function (DUF630 and DUF632); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT3G60320.1); Has 861 Blast hits to 735 proteins in 117 species: Archae - 0; Bacteria - 21; Metazoa - 78; Fungi - 83; Plants - 611; Viruses - 12; Other Eukaryotes - 56 (source: NCBI BLink).;Protein of unknown function (DUF630 and DUF632) transcript=eq;prot=eq; + 1 No
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