Gene family  

Sub-families
ORTHO000321 (68 genes in 25 species)
ORTHO003459 (29 genes in 18 species)
ORTHO005849 (25 genes in 18 species)
View all sub-families (25)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (26 genes)
ath
Arabidopsis thaliana (22 genes)
bdi
Brachypodium distachyon (19 genes)
cpa
Carica papaya (12 genes)
cre
Chlamydomonas reinhardtii (6 genes)
fve
Fragaria vesca (16 genes)
gma
Glycine max (32 genes)
lja
Lotus japonicus (21 genes)
mdo
Malus domestica (36 genes)
mes
Manihot esculenta (19 genes)
mrcc299
Micromonas sp. RCC299 (6 genes)
mtr
Medicago truncatula (14 genes)
olu
Ostreococcus lucimarinus (7 genes)
osa
Oryza sativa ssp. japonica (20 genes)
osaindica
Oryza sativa ssp. indica (23 genes)
ota
Ostreococcus tauri (3 genes)
ppa
Physcomitrella patens (10 genes)
ptr
Populus trichocarpa (24 genes)
rco
Ricinus communis (15 genes)
sbi
Sorghum bicolor (18 genes)
smo
Selaginella moellendorffii (7 genes)
tca
Theobroma cacao (21 genes)
vca
Volvox carteri (3 genes)
vvi
Vitis vinifera (20 genes)
zma
Zea mays (23 genes)



The gene family HOM000172 has 423 genes in 25 species (26 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 22, showing 20 records out of 423 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G01290 aly name=Al_scaffold_0001_125;pid=878358;prot=eq;tid=909871 + scaffold_1 No
AL1G24370 aly name=fgenesh1_pg.C_scaffold_1002079;pid=335514;prot=eq;tid=335514 + scaffold_1 No
AL1G35510 aly name=fgenesh1_pm.C_scaffold_1002707;pid=313927;prot=eq;tid=313927 - scaffold_1 No
AL1G44100 aly name=scaffold_104684.1;pid=891890;prot=eq;tid=923403 + scaffold_1 No
AL2G06070 aly name=fgenesh2_kg.2__440__AT1G60000.1;pid=475310;prot=eq;tid=475310 + scaffold_2 No
AL2G20470 aly name=fgenesh1_pg.C_scaffold_2001495;pid=339396;prot=eq;tid=339396 - scaffold_2 No
AL3G16620 aly name=scaffold_301831.1;pid=897861;prot=eq;tid=929374 + scaffold_3 No
AL3G17490 aly name=Al_scaffold_0003_1714;pid=873073;prot=eq;tid=904586 - scaffold_3 No
AL3G20880 aly name=scaffold_302280.1;pid=898310;prot=eq;tid=929823 + scaffold_3 No
AL3G20910 aly name=Al_scaffold_0003_2041;pid=873400;prot=eq;tid=904913 + scaffold_3 No
AL3G34070 aly name=Al_scaffold_0003_3307;pid=874666;prot=eq;tid=906179 + scaffold_3 No
AL3G35120 aly name=scaffold_303734.1;pid=899764;prot=eq;tid=931277 + scaffold_3 No
AL3G39640 aly name=fgenesh2_kg.3__3460__AT2G18510.1;pid=480759;prot=eq;tid=480759 - scaffold_3 No
AL4G00890 aly name=fgenesh2_kg.4__95__AT2G21690.1;pid=481035;prot=eq;tid=481035 - scaffold_4 Yes
AL4G03030 aly name=scaffold_400317.1;pid=900816;prot=eq;tid=932329 + scaffold_4 No
AL4G20770 aly name=fgenesh2_kg.4__1566__AT2G35410.1;pid=482506;prot=eq;tid=482506 + scaffold_4 No
AL4G22130 aly name=fgenesh2_kg.4__1704__AT2G36660.1;pid=482644;prot=eq;tid=482644 - scaffold_4 No
AL4G22880 aly name=fgenesh2_kg.4__1774__AT2G37220.1;pid=482714;prot=eq;tid=482714 - scaffold_4 No
AL5G22180 aly name=scaffold_502310.1;pid=906606;prot=eq;tid=938119 + scaffold_5 No
AL5G23440 aly name=fgenesh1_pg.C_scaffold_5001832;pid=348440;prot=eq;tid=348440 - scaffold_5 No
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species
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chr
outlier