Gene family  

Sub-families
ORTHO001871 (35 genes in 17 species)
ORTHO002397 (32 genes in 15 species)
ORTHO009056 (21 genes in 8 species)
View all sub-families (59)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (14 genes)
ath
Arabidopsis thaliana (14 genes)
bdi
Brachypodium distachyon (34 genes)
cpa
Carica papaya (13 genes)
fve
Fragaria vesca (27 genes)
gma
Glycine max (38 genes)
lja
Lotus japonicus (20 genes)
mdo
Malus domestica (31 genes)
mes
Manihot esculenta (15 genes)
mtr
Medicago truncatula (18 genes)
osa
Oryza sativa ssp. japonica (29 genes)
osaindica
Oryza sativa ssp. indica (30 genes)
ppa
Physcomitrella patens (2 genes)
ptr
Populus trichocarpa (22 genes)
rco
Ricinus communis (13 genes)
sbi
Sorghum bicolor (28 genes)
smo
Selaginella moellendorffii (21 genes)
tca
Theobroma cacao (25 genes)
vvi
Vitis vinifera (12 genes)
zma
Zea mays (19 genes)



The gene family HOM000170 has 425 genes in 20 species (14 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 22, showing 20 records out of 425 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G24530 aly name=Al_scaffold_0001_2400;pid=880633;prot=eq;tid=912146 - scaffold_1 No
AL1G49800 aly name=fgenesh2_kg.1__4532__AT1G55210.1;pid=474578;prot=eq;tid=474578 - scaffold_1 No
AL2G07490 aly name=fgenesh2_kg.2__555__AT1G58170.1;pid=475425;prot=eq;tid=475425 + scaffold_2 No
AL3G14180 aly name=scaffold_301568.1;pid=897598;prot=eq;tid=929111 + scaffold_3 No
AL3G14190 aly name=fgenesh2_kg.3__1458__AT3G13660.1;pid=478757;prot=eq;tid=478757 + scaffold_3 No
AL3G14200 aly name=fgenesh1_pm.C_scaffold_3001159;pid=318143;prot=eq;tid=318143 + scaffold_3 No
AL4G00200 aly name=fgenesh2_kg.4__19__AT2G21100.1;pid=480959;prot=eq;tid=480959 - scaffold_4 No
AL4G00210 aly name=fgenesh2_kg.4__20__AT2G21110.1;pid=480960;prot=eq;tid=480960 - scaffold_4 No
AL5G28610 aly name=fgenesh1_pm.C_scaffold_5001840;pid=324296;prot=eq;tid=324296 - scaffold_5 No
AL5G28620 aly name=fgenesh1_pg.C_scaffold_5002267;pid=348875;prot=eq;tid=348875 - scaffold_5 No
AL7G00570 aly name=scaffold_700062.1;pid=912320;prot=eq;tid=943833 - scaffold_7 No
AL8G08740 aly name=fgenesh2_kg.8__600__AT5G42500.1;pid=494784;prot=eq;tid=494784 + scaffold_8 No
AL8G08770 aly name=scaffold_800904.1;pid=917504;prot=eq;tid=949017 + scaffold_8 No
AL8G12400 aly name=scaffold_801254.1;pid=917854;prot=eq;tid=949367 - scaffold_8 No
AT1G22900 ath Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G42500.1); Has 955 Blast hits to 954 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 955; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Disease resistance-responsive (dirigent-like protein) family protein transcript=eq;prot=eq; - 1 No
AT1G55210 ath Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1); Has 829 Blast hits to 827 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 829; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Disease resistance-responsive (dirigent-like protein) family protein transcript=eq;prot=eq; - 1 No
AT1G58170 ath Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT5G49040.1); Has 838 Blast hits to 837 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 838; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Disease resistance-responsive (dirigent-like protein) family protein transcript=eq;prot=eq; + 1 No
AT1G65870 ath Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G22900.1); Has 912 Blast hits to 910 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 912; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Disease resistance-responsive (dirigent-like protein) family protein transcript=eq;prot=eq; + 1 No
AT2G21100 ath Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 857 Blast hits to 856 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 857; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Disease resistance-responsive (dirigent-like protein) family protein transcript=eq;prot=eq; - 2 No
AT2G21110 ath Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: central cell; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G38700.1); Has 849 Blast hits to 848 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 849; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Disease resistance-responsive (dirigent-like protein) family protein transcript=eq;prot=eq; - 2 No
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