Gene family 
- Id
- HOM000158
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO004268 (27 genes in 18 species)
ORTHO005065 (26 genes in 18 species)
ORTHO006078 (25 genes in 18 species)
View all sub-families (53)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (18 genes)
- ath
- Arabidopsis thaliana (17 genes)
- bdi
- Brachypodium distachyon (19 genes)
- cpa
- Carica papaya (15 genes)
- fve
- Fragaria vesca (17 genes)
- gma
- Glycine max (55 genes)
- lja
- Lotus japonicus (19 genes)
- mdo
- Malus domestica (55 genes)
- mes
- Manihot esculenta (24 genes)
- mtr
- Medicago truncatula (41 genes)
- osa
- Oryza sativa ssp. japonica (17 genes)
- osaindica
- Oryza sativa ssp. indica (15 genes)
- ppa
- Physcomitrella patens (21 genes)
- ptr
- Populus trichocarpa (24 genes)
- rco
- Ricinus communis (15 genes)
- sbi
- Sorghum bicolor (25 genes)
- smo
- Selaginella moellendorffii (5 genes)
- tca
- Theobroma cacao (12 genes)
- vvi
- Vitis vinifera (17 genes)
- zma
- Zea mays (28 genes)
The gene family HOM000158 has 459 genes in 20 species (42 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000158
Page 1 of 23, showing 20 records out of 459 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL1G01000 | aly | name=scaffold_100116.1;pid=887322;prot=eq;tid=918835 | + | scaffold_1 | Yes | |
| AL1G01070 | aly | name=fgenesh2_kg.1__101__AT1G01260.1;pid=470147;prot=eq;tid=470147 | - | scaffold_1 | No | |
| AL1G10620 | aly | name=fgenesh2_kg.1__1138__AT1G10610.1;pid=471184;prot=eq;tid=471184 | + | scaffold_1 | No | |
| AL1G33940 | aly | name=scaffold_103634.1;pid=890840;prot=eq;tid=922353 | - | scaffold_1 | No | |
| AL4G02170 | aly | name=fgenesh2_kg.4__196__AT2G22750.1;pid=481136;prot=eq;tid=481136 | + | scaffold_4 | No | |
| AL4G02180 | aly | name=fgenesh2_kg.4__197__AT2G22760.1;pid=481137;prot=eq;tid=481137 | + | scaffold_4 | No | |
| AL4G02190 | aly | name=fgenesh2_kg.4__198__AT2G22770.1;pid=481138;prot=eq;tid=481138 | + | scaffold_4 | No | |
| AL4G11910 | aly | name=fgenesh2_kg.4__753__AT2G28160.1;pid=481693;prot=eq;tid=481693 | - | scaffold_4 | No | |
| AL4G34640 | aly | name=fgenesh2_kg.4__2868__AT2G46510.1;pid=483808;prot=eq;tid=483808 | - | scaffold_4 | No | |
| AL6G40760 | aly | name=Al_scaffold_0006_3930;pid=864421;prot=eq;tid=895934 | + | scaffold_6 | No | |
| AL7G07240 | aly | name=scaffold_700763.1;pid=913021;prot=eq;tid=944534 | - | scaffold_7 | Yes | |
| AL7G11720 | aly | name=fgenesh2_kg.7__1196__AT4G29930.1;pid=491763;prot=eq;tid=491763 | - | scaffold_7 | No | |
| AL7G21370 | aly | name=fgenesh1_pg.C_scaffold_7001824;pid=354651;prot=eq;tid=354651 | - | scaffold_7 | No | |
| AL7G25020 | aly | name=fgenesh2_kg.7__2520__AT4G17880.1;pid=493087;prot=eq;tid=493087 | + | scaffold_7 | No | |
| AL7G26840 | aly | name=scaffold_702851.1;pid=915109;prot=eq;tid=946622 | - | scaffold_7 | No | |
| AL8G01320 | aly | name=Al_scaffold_0008_132;pid=883868;prot=eq;tid=915381 | - | scaffold_8 | No | |
| AL8G01410 | aly | name=scaffold_800152.1;pid=916752;prot=eq;tid=948265 | - | scaffold_8 | No | |
| AL8G22830 | aly | name=fgenesh2_kg.8__1627__AT5G57150.1;pid=495811;prot=eq;tid=495811 | + | scaffold_8 | No | |
| AT1G01260 | ath | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ABA-inducible BHLH-type transcription factor (TAIR:AT2G46510.1); Has 3647 Blast hits to 3273 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 174; Fungi - 93; Plants - 3336; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink).;basic helix-loop-helix (bHLH) DNA-binding superfamily protein | transcript=eq;prot=eq; | + | 1 | No |
| AT1G10610 | ath | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 1439 Blast hits to 1421 proteins in 116 species: Archae - 0; Bacteria - 21; Metazoa - 63; Fungi - 6; Plants - 1338; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).;basic helix-loop-helix (bHLH) DNA-binding superfamily protein | transcript=eq;prot=eq; | + | 1 | No |