Gene family 
- Id
- HOM000093
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO000363 (64 genes in 18 species)
ORTHO000754 (48 genes in 18 species)
ORTHO000830 (46 genes in 19 species)
View all sub-families (48)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (43 genes)
- ath
- Arabidopsis thaliana (35 genes)
- bdi
- Brachypodium distachyon (36 genes)
- cpa
- Carica papaya (20 genes)
- cre
- Chlamydomonas reinhardtii (3 genes)
- fve
- Fragaria vesca (38 genes)
- gma
- Glycine max (42 genes)
- lja
- Lotus japonicus (26 genes)
- mdo
- Malus domestica (69 genes)
- mes
- Manihot esculenta (30 genes)
- mrcc299
- Micromonas sp. RCC299 (3 genes)
- mtr
- Medicago truncatula (50 genes)
- olu
- Ostreococcus lucimarinus (1 gene)
- osa
- Oryza sativa ssp. japonica (50 genes)
- osaindica
- Oryza sativa ssp. indica (54 genes)
- ota
- Ostreococcus tauri (2 genes)
- ppa
- Physcomitrella patens (7 genes)
- ptr
- Populus trichocarpa (44 genes)
- rco
- Ricinus communis (25 genes)
- sbi
- Sorghum bicolor (42 genes)
- smo
- Selaginella moellendorffii (17 genes)
- tca
- Theobroma cacao (42 genes)
- vca
- Volvox carteri (2 genes)
- vvi
- Vitis vinifera (27 genes)
- zma
- Zea mays (39 genes)
The gene family HOM000093 has 747 genes in 25 species (28 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of this gene family.
- ...the expansion/depletion of species in this gene family.
View
- ...the multiple sequence alignment of the homologous gene family.
- ...the similarity heatmap of this gene family.
- ...the genome wide organization of this gene family.
- ...the functional annotation associated with this gene family.
Index of genes with 1 constraints:
- gene family : HOM000093
Page 1 of 38, showing 20 records out of 747 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL0G06940 | aly | name=fgenesh2_kg.277__2__AT5G58860.1;pid=497374;prot=eq;tid=497374 | - | scaffold_277 | No | |
| AL0G07520 | aly | name=scaffold_31100001.1;pid=920522;prot=eq;tid=952035 | + | scaffold_311 | No | |
| AL0G07710 | aly | name=fgenesh2_kg.345__1__AT2G27690.1;pid=497398;prot=eq;tid=497398 | - | scaffold_345 | No | |
| AL1G00680 | aly | name=scaffold_100080.1;pid=887286;prot=eq;tid=918799 | - | scaffold_1 | No | |
| AL1G13760 | aly | name=fgenesh2_kg.1__1421__AT1G13140.1;pid=471467;prot=eq;tid=471467 | - | scaffold_1 | No | |
| AL1G13770 | aly | name=fgenesh2_kg.1__1422__AT1G13150.1;pid=471468;prot=eq;tid=471468 | - | scaffold_1 | No | |
| AL1G28100 | aly | name=fgenesh2_kg.1__2847__AT1G24540.1;pid=472893;prot=eq;tid=472893 | - | scaffold_1 | No | |
| AL1G35930 | aly | name=fgenesh1_pm.C_scaffold_1002730;pid=313950;prot=eq;tid=313950 | - | scaffold_1 | No | |
| AL1G40970 | aly | name=scaffold_104351.1;pid=891557;prot=eq;tid=923070 | - | scaffold_1 | No | |
| AL1G40980 | aly | name=scaffold_104352.1;pid=891558;prot=eq;tid=923071 | - | scaffold_1 | No | |
| AL1G53630 | aly | name=Al_scaffold_0001_5272;pid=883505;prot=eq;tid=915018 | - | scaffold_1 | No | |
| AL1G53700 | aly | name=fgenesh2_kg.1__4813__AT1G57750.1;pid=474859;prot=eq;tid=474859 | - | scaffold_1 | No | |
| AL2G01440 | aly | name=Al_scaffold_0002_123;pid=875529;prot=eq;tid=907042 | + | scaffold_2 | No | |
| AL2G10510 | aly | name=Al_scaffold_0002_987;pid=876393;prot=eq;tid=907906 | - | scaffold_2 | No | |
| AL2G10530 | aly | name=scaffold_201078.1;pid=894004;prot=eq;tid=925517 | - | scaffold_2 | No | |
| AL2G10550 | aly | name=fgenesh1_pg.C_scaffold_2000780;pid=338681;prot=eq;tid=338681 | - | scaffold_2 | No | |
| AL2G10580 | aly | name=fgenesh2_kg.2__721__AT1G65340.1;pid=475591;prot=eq;tid=475591 | - | scaffold_2 | No | |
| AL2G17750 | aly | name=fgenesh2_kg.2__1207__AT1G69500.1;pid=476077;prot=eq;tid=476077 | + | scaffold_2 | No | |
| AL3G00220 | aly | name=scaffold_300023.1;pid=896053;prot=eq;tid=927566 | + | scaffold_3 | No | |
| AL3G28250 | aly | name=scaffold_303037.1;pid=899067;prot=eq;tid=930580 | + | scaffold_3 | No |