Gene family  

Sub-families
ORTHO002417 (32 genes in 19 species)
ORTHO004348 (27 genes in 18 species)
ORTHO005122 (26 genes in 20 species)
View all sub-families (90)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (42 genes)
ath
Arabidopsis thaliana (34 genes)
bdi
Brachypodium distachyon (41 genes)
cpa
Carica papaya (29 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (31 genes)
gma
Glycine max (79 genes)
lja
Lotus japonicus (27 genes)
mdo
Malus domestica (68 genes)
mes
Manihot esculenta (53 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (30 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (41 genes)
osaindica
Oryza sativa ssp. indica (37 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (44 genes)
ptr
Populus trichocarpa (63 genes)
rco
Ricinus communis (36 genes)
sbi
Sorghum bicolor (38 genes)
smo
Selaginella moellendorffii (12 genes)
tca
Theobroma cacao (38 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (38 genes)
zma
Zea mays (53 genes)



The gene family HOM000080 has 839 genes in 25 species (101 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 42, showing 20 records out of 839 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G05000 aly name=Al_scaffold_0133_2;pid=856487;prot=eq;tid=888000 + scaffold_133 Yes
AL1G13970 aly name=scaffold_101490.1;pid=888696;prot=eq;tid=920209 + scaffold_1 No
AL1G15400 aly name=fgenesh2_kg.1__1592__AT1G14600.1;pid=471638;prot=eq;tid=471638 - scaffold_1 No
AL1G27620 aly name=Al_scaffold_0001_2706;pid=880939;prot=eq;tid=912452 - scaffold_1 No
AL1G33500 aly name=fgenesh2_kg.1__3368__AT1G32240.1;pid=473414;prot=eq;tid=473414 - scaffold_1 No
AL1G43800 aly name=fgenesh2_kg.1__4045__AT1G49560.1;pid=474091;prot=eq;tid=474091 + scaffold_1 No
AL1G50800 aly name=Al_scaffold_0001_4989;pid=883222;prot=eq;tid=914735 + scaffold_1 No
AL2G16880 aly name=fgenesh2_kg.2__1124__AT1G68670.1;pid=475994;prot=eq;tid=475994 + scaffold_2 No
AL2G17830 aly name=fgenesh2_kg.2__1223__AT1G69580.2;pid=476093;prot=eq;tid=476093 + scaffold_2 No
AL2G28440 aly name=fgenesh2_kg.2__2239__AT1G79430.2;pid=477109;prot=eq;tid=477109 - scaffold_2 No
AL3G03580 aly name=Al_scaffold_0003_352;pid=871711;prot=eq;tid=903224 - scaffold_3 No
AL3G04010 aly name=fgenesh1_pm.C_scaffold_3000324;pid=317308;prot=eq;tid=317308 + scaffold_3 No
AL3G13170 aly name=scaffold_301453.1;pid=897483;prot=eq;tid=928996 - scaffold_3 No
AL3G13480 aly name=fgenesh2_kg.3__1373__AT3G13040.1;pid=478672;prot=eq;tid=478672 - scaffold_3 No
AL3G27100 aly name=fgenesh1_pm.C_scaffold_3002126;pid=319110;prot=eq;tid=319110 + scaffold_3 No
AL3G27600 aly name=scaffold_302970.1;pid=899000;prot=eq;tid=930513 + scaffold_3 No
AL3G31550 aly name=fgenesh1_pm.C_scaffold_3002359;pid=319343;prot=eq;tid=319343 + scaffold_3 No
AL3G31580 aly name=scaffold_303375.1;pid=899405;prot=eq;tid=930918 + scaffold_3 No
AL3G40550 aly name=scaffold_304291.1;pid=900321;prot=eq;tid=931834 + scaffold_3 Yes
AL3G41230 aly name=scaffold_304362.1;pid=900392;prot=eq;tid=931905 + scaffold_3 No
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species
description
comment
strand
chr
outlier