Gene family 
- Id
- HOM000078
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO000080 (132 genes in 18 species)
ORTHO000651 (51 genes in 14 species)
ORTHO001672 (36 genes in 18 species)
View all sub-families (62)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (17 genes)
- ath
- Arabidopsis thaliana (21 genes)
- bdi
- Brachypodium distachyon (42 genes)
- cpa
- Carica papaya (22 genes)
- cre
- Chlamydomonas reinhardtii (13 genes)
- fve
- Fragaria vesca (54 genes)
- gma
- Glycine max (54 genes)
- lja
- Lotus japonicus (22 genes)
- mdo
- Malus domestica (81 genes)
- mes
- Manihot esculenta (54 genes)
- mrcc299
- Micromonas sp. RCC299 (6 genes)
- mtr
- Medicago truncatula (23 genes)
- olu
- Ostreococcus lucimarinus (7 genes)
- osa
- Oryza sativa ssp. japonica (48 genes)
- osaindica
- Oryza sativa ssp. indica (58 genes)
- ota
- Ostreococcus tauri (4 genes)
- ppa
- Physcomitrella patens (7 genes)
- ptr
- Populus trichocarpa (59 genes)
- rco
- Ricinus communis (26 genes)
- sbi
- Sorghum bicolor (50 genes)
- smo
- Selaginella moellendorffii (38 genes)
- tca
- Theobroma cacao (38 genes)
- vca
- Volvox carteri (6 genes)
- vvi
- Vitis vinifera (54 genes)
- zma
- Zea mays (42 genes)
The gene family HOM000078 has 846 genes in 25 species (55 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000078
Page 1 of 43, showing 20 records out of 846 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL0G10970 | aly | name=scaffold_85500001.1;pid=921020;prot=eq;tid=952533 | - | scaffold_855 | No | |
| AL1G17920 | aly | name=fgenesh2_kg.1__1858__AT1G17060.1;pid=471904;prot=eq;tid=471904 | - | scaffold_1 | No | |
| AL1G32980 | aly | name=fgenesh2_kg.1__3320__AT1G31800.1;pid=473366;prot=eq;tid=473366 | + | scaffold_1 | No | |
| AL2G14940 | aly | name=fgenesh2_kg.2__938__AT1G67110.1;pid=475808;prot=eq;tid=475808 | - | scaffold_2 | No | |
| AL2G23990 | aly | name=fgenesh2_kg.2__1782__AT1G75130.1;pid=476652;prot=eq;tid=476652 | - | scaffold_2 | No | |
| AL3G15450 | aly | name=fgenesh2_kg.3__1581__AT3G14610.1;pid=478880;prot=eq;tid=478880 | + | scaffold_3 | No | |
| AL3G15460 | aly | name=scaffold_301702.1;pid=897732;prot=eq;tid=929245 | - | scaffold_3 | No | |
| AL3G15470 | aly | name=fgenesh2_kg.3__1583__AT3G14660.1;pid=478882;prot=eq;tid=478882 | + | scaffold_3 | No | |
| AL4G09550 | aly | name=scaffold_400958.1;pid=901457;prot=eq;tid=932970 | + | scaffold_4 | No | |
| AL4G35120 | aly | name=Al_scaffold_0004_3399;pid=871236;prot=eq;tid=902749 | - | scaffold_4 | No | |
| AL4G35130 | aly | name=fgenesh1_pg.C_scaffold_4002847;pid=346505;prot=eq;tid=346505 | - | scaffold_4 | No | |
| AL4G35140 | aly | name=scaffold_403669.1;pid=904168;prot=eq;tid=935681 | - | scaffold_4 | No | |
| AL7G14170 | aly | name=fgenesh1_pm.C_scaffold_7001148;pid=328921;prot=eq;tid=328921 | - | scaffold_7 | No | |
| AL7G28770 | aly | name=fgenesh2_kg.7__2810__AT4G15110.1;pid=493377;prot=eq;tid=493377 | + | scaffold_7 | No | |
| AL7G39030 | aly | name=fgenesh2_kg.7__3483__AT1G17060.1;pid=494050;prot=eq;tid=494050 | - | scaffold_7 | No | |
| AL7G40090 | aly | name=fgenesh2_kg.7__3565__AT5G38450.1;pid=494132;prot=eq;tid=494132 | + | scaffold_7 | No | |
| AL8G16730 | aly | name=fgenesh1_pm.C_scaffold_8000951;pid=331608;prot=eq;tid=331608 | + | scaffold_8 | No | |
| AT1G17060 | ath | Encodes a protein with similarity to other cytochrome P450's and is a homolog of BAS1. Over expression causes a dwarf phenotype resembling brassinolide resistant mutants. Double mutant analysis of sob7/bas1 loss of function mutants suggests these genes have redundant functions in light responsiveness. SOB7 may function in metabolizing brassinolides. Expressed in leaf, root, stem and silique but expression highest in flower and cauline leaves. Dominant overexpressing plants have dwarf phenotype, short siliques/seeds, rounded dark green leaves and short hypocotyls in light and dark. Loss of function alleles result in plants with long hypocotyls.;cytochrome p450 72c1 | transcript=eq;prot=eq; | - | 1 | No |
| AT1G31800 | ath | Encodes a protein with β-ring carotenoid hydroxylase activity.;cytochrome P450, family 97, subfamily A, polypeptide 3 | transcript=eq;prot=eq; | + | 1 | No |
| AT1G67110 | ath | member of CYP709A;cytochrome P450, family 735, subfamily A, polypeptide 2 | transcript=eq;prot=eq; | - | 1 | No |