Gene family  

Sub-families
ORTHO001286 (40 genes in 20 species)
ORTHO002028 (34 genes in 14 species)
ORTHO003476 (29 genes in 18 species)
View all sub-families (117)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (19 genes)
ath
Arabidopsis thaliana (20 genes)
bdi
Brachypodium distachyon (53 genes)
cpa
Carica papaya (28 genes)
fve
Fragaria vesca (36 genes)
gma
Glycine max (62 genes)
lja
Lotus japonicus (32 genes)
mdo
Malus domestica (84 genes)
mes
Manihot esculenta (41 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (33 genes)
osa
Oryza sativa ssp. japonica (68 genes)
osaindica
Oryza sativa ssp. indica (70 genes)
ppa
Physcomitrella patens (8 genes)
ptr
Populus trichocarpa (67 genes)
rco
Ricinus communis (36 genes)
sbi
Sorghum bicolor (53 genes)
smo
Selaginella moellendorffii (18 genes)
tca
Theobroma cacao (32 genes)
vvi
Vitis vinifera (38 genes)
zma
Zea mays (61 genes)



The gene family HOM000074 has 861 genes in 21 species (58 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 44, showing 20 records out of 861 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL1G20140 aly name=scaffold_102142.1;pid=889348;prot=eq;tid=920861 + scaffold_1 No
AL1G40750 aly name=fgenesh2_kg.1__3844__AT1G47480.1;pid=473890;prot=eq;tid=473890 + scaffold_1 No
AL1G43930 aly name=scaffold_104666.1;pid=891872;prot=eq;tid=923385 - scaffold_1 No
AL1G43940 aly name=scaffold_104667.1;pid=891873;prot=eq;tid=923386 - scaffold_1 No
AL1G43980 aly name=fgenesh2_kg.1__4053__AT1G49660.1;pid=474099;prot=eq;tid=474099 - scaffold_1 No
AL2G16830 aly name=fgenesh2_kg.2__1118__AT1G68620.1;pid=475988;prot=eq;tid=475988 + scaffold_2 No
AL3G04930 aly name=fgenesh2_kg.3__496__AT3G05120.1;pid=477795;prot=eq;tid=477795 + scaffold_3 No
AL4G33510 aly name=scaffold_403506.1;pid=904005;prot=eq;tid=935518 + scaffold_4 No
AL4G33520 aly name=fgenesh2_kg.4__2757__AT2G45610.1;pid=483697;prot=eq;tid=483697 + scaffold_4 No
AL5G03180 aly name=fgenesh2_kg.5__256__AT2G03550.1;pid=484264;prot=eq;tid=484264 + scaffold_5 No
AL5G06260 aly name=fgenesh2_kg.5__509__AT3G27320.1;pid=484517;prot=eq;tid=484517 + scaffold_5 No
AL5G17570 aly name=fgenesh2_kg.5__1216__AT3G48690.1;pid=485224;prot=eq;tid=485224 - scaffold_5 No
AL5G34100 aly name=fgenesh2_kg.5__2797__AT3G63010.1;pid=486805;prot=eq;tid=486805 + scaffold_5 No
AL6G06230 aly name=fgenesh2_kg.6__601__AT5G06570.1;pid=487467;prot=eq;tid=487467 - scaffold_6 No
AL6G14100 aly name=fgenesh2_kg.6__1402__AT5G14310.1;pid=488268;prot=eq;tid=488268 + scaffold_6 No
AL6G15930 aly name=fgenesh2_kg.6__1592__AT5G16080.1;pid=488458;prot=eq;tid=488458 - scaffold_6 No
AL6G23330 aly name=fgenesh2_kg.6__2348__AT5G23530.1;pid=489214;prot=eq;tid=489214 - scaffold_6 No
AL6G27990 aly name=fgenesh1_pg.C_scaffold_6002349;pid=351756;prot=eq;tid=351756 - scaffold_6 No
AL8G28490 aly name=fgenesh2_kg.8__2211__AT5G62180.1;pid=496395;prot=eq;tid=496395 - scaffold_8 No
AT1G19190 ath alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink).;alpha/beta-Hydrolases superfamily protein transcript=eq;prot=eq; + 1 No
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