Gene family  

Sub-families
ORTHO001266 (40 genes in 16 species)
ORTHO002055 (34 genes in 18 species)
ORTHO002450 (32 genes in 18 species)
View all sub-families (114)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (52 genes)
ath
Arabidopsis thaliana (39 genes)
bdi
Brachypodium distachyon (62 genes)
cpa
Carica papaya (33 genes)
fve
Fragaria vesca (66 genes)
gma
Glycine max (79 genes)
lja
Lotus japonicus (37 genes)
mdo
Malus domestica (106 genes)
mes
Manihot esculenta (52 genes)
mtr
Medicago truncatula (58 genes)
osa
Oryza sativa ssp. japonica (56 genes)
osaindica
Oryza sativa ssp. indica (56 genes)
ppa
Physcomitrella patens (14 genes)
ptr
Populus trichocarpa (67 genes)
rco
Ricinus communis (38 genes)
sbi
Sorghum bicolor (60 genes)
smo
Selaginella moellendorffii (14 genes)
tca
Theobroma cacao (54 genes)
vvi
Vitis vinifera (32 genes)
zma
Zea mays (56 genes)



The gene family HOM000055 has 1031 genes in 20 species (80 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 52, showing 20 records out of 1031 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G01320 aly name=fgenesh1_pm.C_scaffold_9000072;pid=333044;prot=eq;tid=333044 + scaffold_9 No
AL0G09160 aly name=scaffold_49600001.1;pid=920749;prot=eq;tid=952262 - scaffold_496 No
AL0G09170 aly name=scaffold_49600002.1;pid=920750;prot=eq;tid=952263 - scaffold_496 No
AL1G18750 aly name=fgenesh2_kg.1__1947__AT1G17800.1;pid=471993;prot=eq;tid=471993 + scaffold_1 No
AL1G24060 aly name=fgenesh2_kg.1__2442__AT1G22480.1;pid=472488;prot=eq;tid=472488 - scaffold_1 No
AL1G42760 aly name=fgenesh2_kg.1__3993__AT1G48940.1;pid=474039;prot=eq;tid=474039 - scaffold_1 No
AL2G00110 aly name=fgenesh2_kg.2__8__AT1G64640.1;pid=474878;prot=eq;tid=474878 + scaffold_2 No
AL2G21010 aly name=fgenesh2_kg.2__1484__AT1G72230.1;pid=476354;prot=eq;tid=476354 + scaffold_2 No
AL2G23800 aly name=scaffold_202434.1;pid=895360;prot=eq;tid=926873 + scaffold_2 No
AL2G29980 aly name=Al_scaffold_0002_2817;pid=878223;prot=eq;tid=909736 - scaffold_2 No
AL3G01040 aly name=fgenesh1_pm.C_scaffold_3000099;pid=317083;prot=eq;tid=317083 - scaffold_3 No
AL3G04380 aly name=scaffold_300482.1;pid=896512;prot=eq;tid=928025 + scaffold_3 Yes
AL3G19080 aly name=Al_scaffold_0003_1860;pid=873219;prot=eq;tid=904732 - scaffold_3 No
AL3G20140 aly name=fgenesh2_kg.3__2065__AT3G18590.1;pid=479364;prot=eq;tid=479364 + scaffold_3 No
AL3G22520 aly name=fgenesh2_kg.3__2284__AT3G20570.1;pid=479583;prot=eq;tid=479583 - scaffold_3 No
AL3G29590 aly name=scaffold_303167.1;pid=899197;prot=eq;tid=930710 - scaffold_3 Yes
AL3G38200 aly name=fgenesh1_pg.C_scaffold_3003128;pid=343365;prot=eq;tid=343365 + scaffold_3 No
AL4G03780 aly name=fgenesh1_pg.C_scaffold_4000293;pid=343951;prot=eq;tid=343951 - scaffold_4 No
AL4G06010 aly name=fgenesh2_kg.4__420__AT2G25060.1;pid=481360;prot=eq;tid=481360 + scaffold_4 No
AL4G10420 aly name=fgenesh2_kg.4__643__AT2G27035.1;pid=481583;prot=eq;tid=481583 + scaffold_4 No
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species
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chr
outlier