Gene family  

Sub-families
ORTHO000155 (91 genes in 6 species)
ORTHO000244 (77 genes in 10 species)
ORTHO000338 (67 genes in 10 species)
View all sub-families (101)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (31 genes)
ath
Arabidopsis thaliana (26 genes)
bdi
Brachypodium distachyon (7 genes)
cpa
Carica papaya (12 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (65 genes)
gma
Glycine max (49 genes)
lja
Lotus japonicus (14 genes)
mdo
Malus domestica (124 genes)
mes
Manihot esculenta (99 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (84 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (19 genes)
osaindica
Oryza sativa ssp. indica (23 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (3 genes)
ptr
Populus trichocarpa (193 genes)
rco
Ricinus communis (40 genes)
sbi
Sorghum bicolor (7 genes)
tca
Theobroma cacao (137 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (110 genes)
zma
Zea mays (5 genes)



The gene family HOM000052 has 1053 genes in 24 species (168 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 53, showing 20 records out of 1053 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G02590 aly name=fgenesh2_kg.37__3__AT5G43730.1;pid=497178;prot=eq;tid=497178 - scaffold_37 No
AL1G12580 aly name=scaffold_101336.1;pid=888542;prot=eq;tid=920055 + scaffold_1 No
AL1G12650 aly name=fgenesh1_pm.C_scaffold_1001035;pid=312255;prot=eq;tid=312255 - scaffold_1 No
AL1G12660 aly name=scaffold_101347.1;pid=888553;prot=eq;tid=920066 - scaffold_1 Yes
AL1G16630 aly name=fgenesh1_pg.C_scaffold_1001426;pid=334861;prot=eq;tid=334861 - scaffold_1 No
AL1G16780 aly name=scaffold_101777.1;pid=888983;prot=eq;tid=920496 + scaffold_1 No
AL1G16790 aly name=scaffold_101778.1;pid=888984;prot=eq;tid=920497 + scaffold_1 No
AL1G47620 aly name=fgenesh1_pg.C_scaffold_1003985;pid=337420;prot=eq;tid=337420 + scaffold_1 No
AL2G02810 aly name=scaffold_200289.1;pid=893215;prot=eq;tid=924728 + scaffold_2 Yes
AL2G02860 aly name=fgenesh1_pg.C_scaffold_2000218;pid=338119;prot=eq;tid=338119 - scaffold_2 No
AL2G03560 aly name=Al_scaffold_0002_321;pid=875727;prot=eq;tid=907240 + scaffold_2 No
AL2G04660 aly name=scaffold_200473.1;pid=893399;prot=eq;tid=924912 - scaffold_2 Yes
AL2G04670 aly name=fgenesh1_pg.C_scaffold_2000349;pid=338250;prot=eq;tid=338250 - scaffold_2 No
AL2G04680 aly name=scaffold_200475.1;pid=893401;prot=eq;tid=924914 - scaffold_2 Yes
AL2G08260 aly name=fgenesh1_pg.C_scaffold_2000628;pid=338529;prot=eq;tid=338529 + scaffold_2 Yes
AL3G16700 aly name=Al_scaffold_0003_1642;pid=873001;prot=eq;tid=904514 - scaffold_3 No
AL4G00740 aly name=fgenesh2_kg.4__79__AT2G21530.1;pid=481019;prot=eq;tid=481019 + scaffold_4 Yes
AL4G12900 aly name=fgenesh1_pm.C_scaffold_4000698;pid=320641;prot=eq;tid=320641 + scaffold_4 No
AL6G30060 aly name=fgenesh1_pg.C_scaffold_6002495;pid=351902;prot=eq;tid=351902 - scaffold_6 No
AL7G14800 aly name=fgenesh1_pg.C_scaffold_7001252;pid=354079;prot=eq;tid=354079 - scaffold_7 No
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species
description
comment
strand
chr
outlier