Gene family  

Sub-families
ORTHO000612 (52 genes in 20 species)
ORTHO000915 (44 genes in 19 species)
ORTHO001365 (39 genes in 23 species)
View all sub-families (99)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (41 genes)
ath
Arabidopsis thaliana (37 genes)
bdi
Brachypodium distachyon (49 genes)
cpa
Carica papaya (46 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (56 genes)
gma
Glycine max (112 genes)
lja
Lotus japonicus (52 genes)
mdo
Malus domestica (119 genes)
mes
Manihot esculenta (77 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (66 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (58 genes)
osaindica
Oryza sativa ssp. indica (63 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (38 genes)
ptr
Populus trichocarpa (94 genes)
rco
Ricinus communis (49 genes)
sbi
Sorghum bicolor (78 genes)
smo
Selaginella moellendorffii (48 genes)
tca
Theobroma cacao (44 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (42 genes)
zma
Zea mays (88 genes)



The gene family HOM000042 has 1262 genes in 25 species (151 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 64, showing 20 records out of 1262 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G05970 aly name=fgenesh2_kg.205__1__AT5G52510.1;pid=497317;prot=eq;tid=497317 + scaffold_205 No
AL0G06090 aly name=scaffold_21300003.1;pid=920340;prot=eq;tid=951853 + scaffold_213 Yes
AL1G07130 aly name=Al_scaffold_0001_697;pid=878930;prot=eq;tid=910443 - scaffold_1 No
AL1G15760 aly name=fgenesh2_kg.1__1634__AT1G14920.1;pid=471680;prot=eq;tid=471680 + scaffold_1 No
AL1G22360 aly name=Al_scaffold_0001_2206;pid=880439;prot=eq;tid=911952 - scaffold_1 No
AL1G22650 aly name=fgenesh2_kg.1__2335__AT1G21450.1;pid=472381;prot=eq;tid=472381 + scaffold_1 No
AL1G44890 aly name=fgenesh2_kg.1__4122__AT1G50420.1;pid=474168;prot=eq;tid=474168 - scaffold_1 No
AL1G45080 aly name=fgenesh2_kg.1__4145__AT1G50600.1;pid=474191;prot=eq;tid=474191 - scaffold_1 No
AL1G50200 aly name=scaffold_105352.1;pid=892558;prot=eq;tid=924071 + scaffold_1 No
AL2G02210 aly name=fgenesh1_pg.C_scaffold_2000170;pid=338071;prot=eq;tid=338071 + scaffold_2 No
AL2G13340 aly name=fgenesh2_kg.2__868__AT1G66350.1;pid=475738;prot=eq;tid=475738 + scaffold_2 No
AL3G02810 aly name=fgenesh2_kg.3__292__AT3G03450.1;pid=477591;prot=eq;tid=477591 - scaffold_3 No
AL3G14530 aly name=fgenesh2_kg.3__1487__AT3G13840.1;pid=478786;prot=eq;tid=478786 - scaffold_3 No
AL3G24470 aly name=fgenesh2_kg.3__2437__AT3G22230.1;pid=479736;prot=eq;tid=479736 - scaffold_3 Yes
AL3G24490 aly name=scaffold_302657.1;pid=898687;prot=eq;tid=930200 - scaffold_3 Yes
AL3G30630 aly name=scaffold_303269.1;pid=899299;prot=eq;tid=930812 - scaffold_3 No
AL4G13570 aly name=scaffold_401365.1;pid=901864;prot=eq;tid=933377 + scaffold_4 No
AL4G17250 aly name=scaffold_401771.1;pid=902270;prot=eq;tid=933783 + scaffold_4 Yes
AL4G23470 aly name=fgenesh1_pg.C_scaffold_4001848;pid=345506;prot=eq;tid=345506 + scaffold_4 No
AL4G23510 aly name=fgenesh1_pg.C_scaffold_4001851;pid=345509;prot=eq;tid=345509 + scaffold_4 No
<< previous
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier