Gene family  

Sub-families
ORTHO000332 (67 genes in 17 species)
ORTHO000380 (63 genes in 20 species)
ORTHO000459 (58 genes in 17 species)
View all sub-families (97)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (52 genes)
ath
Arabidopsis thaliana (51 genes)
bdi
Brachypodium distachyon (55 genes)
cpa
Carica papaya (58 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (60 genes)
gma
Glycine max (99 genes)
lja
Lotus japonicus (66 genes)
mdo
Malus domestica (153 genes)
mes
Manihot esculenta (63 genes)
mrcc299
Micromonas sp. RCC299 (7 genes)
mtr
Medicago truncatula (66 genes)
olu
Ostreococcus lucimarinus (7 genes)
osa
Oryza sativa ssp. japonica (65 genes)
osaindica
Oryza sativa ssp. indica (78 genes)
ota
Ostreococcus tauri (5 genes)
ppa
Physcomitrella patens (17 genes)
ptr
Populus trichocarpa (74 genes)
rco
Ricinus communis (60 genes)
sbi
Sorghum bicolor (79 genes)
smo
Selaginella moellendorffii (25 genes)
tca
Theobroma cacao (52 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (47 genes)
zma
Zea mays (66 genes)



The gene family HOM000040 has 1309 genes in 25 species (86 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 66, showing 20 records out of 1309 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G06130 aly name=fgenesh2_kg.219__1__AT3G20460.1;pid=497320;prot=eq;tid=497320 - scaffold_219 No
AL1G04500 aly name=fgenesh2_kg.1__448__AT1G05030.1;pid=470494;prot=eq;tid=470494 - scaffold_1 No
AL1G06930 aly name=fgenesh1_pg.C_scaffold_1000595;pid=334030;prot=eq;tid=334030 + scaffold_1 No
AL1G08520 aly name=fgenesh2_kg.1__915__AT1G08890.1;pid=470961;prot=eq;tid=470961 + scaffold_1 No
AL1G08530 aly name=fgenesh2_kg.1__918__AT1G08900.2;pid=470964;prot=eq;tid=470964 + scaffold_1 No
AL1G08550 aly name=fgenesh2_kg.1__920__AT1G08920.2;pid=470966;prot=eq;tid=470966 + scaffold_1 No
AL1G08560 aly name=scaffold_100921.1;pid=888127;prot=eq;tid=919640 + scaffold_1 No
AL1G11440 aly name=scaffold_101218.1;pid=888424;prot=eq;tid=919937 + scaffold_1 No
AL1G20520 aly name=fgenesh2_kg.1__2128__AT1G19450.1;pid=472174;prot=eq;tid=472174 - scaffold_1 No
AL1G31260 aly name=fgenesh2_kg.1__3197__AT1G30220.1;pid=473243;prot=eq;tid=473243 - scaffold_1 No
AL1G35990 aly name=fgenesh2_kg.1__3559__AT1G34580.1;pid=473605;prot=eq;tid=473605 + scaffold_1 No
AL1G44750 aly name=fgenesh1_pm.C_scaffold_1003210;pid=314430;prot=eq;tid=314430 + scaffold_1 No
AL1G51740 aly name=fgenesh2_kg.1__4702__AT1G54730.2;pid=474748;prot=eq;tid=474748 - scaffold_1 No
AL2G15150 aly name=fgenesh2_kg.2__956__AT1G67300.1;pid=475826;prot=eq;tid=475826 - scaffold_2 No
AL2G24090 aly name=scaffold_202463.1;pid=895389;prot=eq;tid=926902 - scaffold_2 No
AL2G26160 aly name=scaffold_202680.1;pid=895606;prot=eq;tid=927119 - scaffold_2 No
AL2G29960 aly name=fgenesh2_kg.2__2416__AT1G79820.2;pid=477286;prot=eq;tid=477286 + scaffold_2 No
AL3G02390 aly name=fgenesh2_kg.3__256__AT3G03090.1;pid=477555;prot=eq;tid=477555 - scaffold_3 No
AL3G04960 aly name=fgenesh2_kg.3__499__AT3G05150.1;pid=477798;prot=eq;tid=477798 + scaffold_3 No
AL3G04970 aly name=fgenesh1_pg.C_scaffold_3000446;pid=340683;prot=eq;tid=340683 + scaffold_3 No
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