Gene family  

Sub-families
ORTHO001870 (35 genes in 17 species)
ORTHO003792 (28 genes in 18 species)
ORTHO005050 (26 genes in 17 species)
View all sub-families (148)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (64 genes)
ath
Arabidopsis thaliana (60 genes)
bdi
Brachypodium distachyon (52 genes)
cpa
Carica papaya (93 genes)
cre
Chlamydomonas reinhardtii (1 gene)
fve
Fragaria vesca (59 genes)
gma
Glycine max (127 genes)
lja
Lotus japonicus (53 genes)
mdo
Malus domestica (125 genes)
mes
Manihot esculenta (82 genes)
mrcc299
Micromonas sp. RCC299 (1 gene)
mtr
Medicago truncatula (62 genes)
olu
Ostreococcus lucimarinus (1 gene)
osa
Oryza sativa ssp. japonica (55 genes)
osaindica
Oryza sativa ssp. indica (69 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (17 genes)
ptr
Populus trichocarpa (92 genes)
rco
Ricinus communis (45 genes)
sbi
Sorghum bicolor (55 genes)
smo
Selaginella moellendorffii (13 genes)
tca
Theobroma cacao (58 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (51 genes)
zma
Zea mays (81 genes)



The gene family HOM000039 has 1318 genes in 25 species (158 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 66, showing 20 records out of 1318 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G06340 aly name=fgenesh2_kg.233__4__AT5G65050.3;pid=497339;prot=eq;tid=497339 - scaffold_233 No
AL0G09570 aly name=scaffold_60400001.1;pid=920819;prot=eq;tid=952332 + scaffold_604 Yes
AL1G00780 aly name=Al_scaffold_0001_74;pid=878307;prot=eq;tid=909820 + scaffold_1 No
AL1G18220 aly name=fgenesh2_kg.1__1889__AT1G17310.1;pid=471935;prot=eq;tid=471935 - scaffold_1 No
AL1G19700 aly name=fgenesh2_kg.1__2055__AT1G18750.1;pid=472101;prot=eq;tid=472101 + scaffold_1 No
AL1G23650 aly name=Al_scaffold_0001_2320;pid=880553;prot=eq;tid=912066 - scaffold_1 No
AL1G27330 aly name=scaffold_102909.1;pid=890115;prot=eq;tid=921628 + scaffold_1 No
AL1G28370 aly name=fgenesh2_kg.1__2877__AT1G24260.1;pid=472923;prot=eq;tid=472923 + scaffold_1 No
AL1G30950 aly name=fgenesh1_pg.C_scaffold_1002660;pid=336095;prot=eq;tid=336095 + scaffold_1 No
AL1G41120 aly name=fgenesh1_pm.C_scaffold_1003002;pid=314222;prot=eq;tid=314222 + scaffold_1 No
AL1G41190 aly name=scaffold_104372.1;pid=891578;prot=eq;tid=923091 + scaffold_1 No
AL2G13540 aly name=scaffold_201367.1;pid=894293;prot=eq;tid=925806 + scaffold_2 Yes
AL2G13550 aly name=Al_scaffold_0002_1221;pid=876627;prot=eq;tid=908140 + scaffold_2 No
AL2G17400 aly name=fgenesh2_kg.2__1169__AT1G69120.1;pid=476039;prot=eq;tid=476039 - scaffold_2 No
AL2G17790 aly name=Al_scaffold_0002_1615;pid=877021;prot=eq;tid=908534 - scaffold_2 No
AL2G20360 aly name=fgenesh2_kg.2__1419__AT1G71692.1;pid=476289;prot=eq;tid=476289 - scaffold_2 No
AL2G21160 aly name=scaffold_202161.1;pid=895087;prot=eq;tid=926600 - scaffold_2 No
AL2G26040 aly name=fgenesh2_kg.2__2000__AT1G77080.2;pid=476870;prot=eq;tid=476870 + scaffold_2 No
AL2G26930 aly name=fgenesh2_kg.2__2089__AT1G77950.1;pid=476959;prot=eq;tid=476959 + scaffold_2 No
AL2G26950 aly name=fgenesh2_kg.2__2091__AT1G77980.1;pid=476961;prot=eq;tid=476961 - scaffold_2 No
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