Gene family  

Sub-families
ORTHO000177 (86 genes in 23 species)
ORTHO000232 (78 genes in 24 species)
ORTHO000257 (75 genes in 20 species)
View all sub-families (91)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (69 genes)
ath
Arabidopsis thaliana (62 genes)
bdi
Brachypodium distachyon (54 genes)
cpa
Carica papaya (79 genes)
cre
Chlamydomonas reinhardtii (31 genes)
fve
Fragaria vesca (57 genes)
gma
Glycine max (135 genes)
lja
Lotus japonicus (80 genes)
mdo
Malus domestica (146 genes)
mes
Manihot esculenta (75 genes)
mrcc299
Micromonas sp. RCC299 (36 genes)
mtr
Medicago truncatula (63 genes)
olu
Ostreococcus lucimarinus (16 genes)
osa
Oryza sativa ssp. japonica (55 genes)
osaindica
Oryza sativa ssp. indica (57 genes)
ota
Ostreococcus tauri (16 genes)
ppa
Physcomitrella patens (77 genes)
ptr
Populus trichocarpa (94 genes)
rco
Ricinus communis (52 genes)
sbi
Sorghum bicolor (59 genes)
smo
Selaginella moellendorffii (60 genes)
tca
Theobroma cacao (58 genes)
vca
Volvox carteri (40 genes)
vvi
Vitis vinifera (73 genes)
zma
Zea mays (83 genes)



The gene family HOM000030 has 1627 genes in 25 species (260 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 82, showing 20 records out of 1627 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G03770 aly name=scaffold_7400001.1;pid=920942;prot=eq;tid=952455 + scaffold_74 No
AL0G10700 aly name=scaffold_81000004.1;pid=920994;prot=eq;tid=952507 + scaffold_810 Yes
AL1G00350 aly name=fgenesh2_kg.1__33__AT1G01950.1;pid=470079;prot=eq;tid=470079 - scaffold_1 No
AL1G08800 aly name=fgenesh1_pm.C_scaffold_1000741;pid=311961;prot=eq;tid=311961 - scaffold_1 No
AL1G12800 aly name=fgenesh2_kg.1__1347__AT1G12430.1;pid=471393;prot=eq;tid=471393 - scaffold_1 No
AL1G19300 aly name=fgenesh2_kg.1__2011__AT1G18370.1;pid=472057;prot=eq;tid=472057 - scaffold_1 No
AL1G19320 aly name=fgenesh1_pg.C_scaffold_1001665;pid=335100;prot=eq;tid=335100 - scaffold_1 No
AL1G19470 aly name=fgenesh1_pg.C_scaffold_1001676;pid=335111;prot=eq;tid=335111 - scaffold_1 No
AL1G22990 aly name=fgenesh2_kg.1__2366__AT1G21730.1;pid=472412;prot=eq;tid=472412 + scaffold_1 No
AL1G50170 aly name=fgenesh2_kg.1__4570__AT1G55550.1;pid=474616;prot=eq;tid=474616 + scaffold_1 No
AL2G01510 aly name=fgenesh2_kg.2__121__AT1G63640.1;pid=474991;prot=eq;tid=474991 + scaffold_2 No
AL2G06870 aly name=scaffold_200699.1;pid=893625;prot=eq;tid=925138 - scaffold_2 No
AL2G21030 aly name=fgenesh1_pm.C_scaffold_2001227;pid=316194;prot=eq;tid=316194 + scaffold_2 No
AL3G10430 aly name=fgenesh2_kg.3__1044__AT3G10180.1;pid=478343;prot=eq;tid=478343 - scaffold_3 No
AL3G10560 aly name=Al_scaffold_0003_1037;pid=872396;prot=eq;tid=903909 + scaffold_3 No
AL3G12470 aly name=fgenesh2_kg.3__1255__AT3G12020.1;pid=478554;prot=eq;tid=478554 + scaffold_3 No
AL3G12530 aly name=Al_scaffold_0003_1225;pid=872584;prot=eq;tid=904097 + scaffold_3 Yes
AL3G17050 aly name=scaffold_301876.1;pid=897906;prot=eq;tid=929419 + scaffold_3 No
AL3G17820 aly name=fgenesh2_kg.3__1829__AT3G16630.2;pid=479128;prot=eq;tid=479128 - scaffold_3 No
AL3G18700 aly name=scaffold_302045.1;pid=898075;prot=eq;tid=929588 + scaffold_3 No
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species
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chr
outlier