Gene family  

Sub-families
ORTHO004164 (28 genes in 13 species)
ORTHO004351 (27 genes in 18 species)
ORTHO005337 (26 genes in 16 species)
View all sub-families (295)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (109 genes)
ath
Arabidopsis thaliana (111 genes)
bdi
Brachypodium distachyon (129 genes)
cpa
Carica papaya (63 genes)
cre
Chlamydomonas reinhardtii (2 genes)
fve
Fragaria vesca (73 genes)
gma
Glycine max (198 genes)
lja
Lotus japonicus (76 genes)
mdo
Malus domestica (168 genes)
mes
Manihot esculenta (115 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (98 genes)
olu
Ostreococcus lucimarinus (5 genes)
osa
Oryza sativa ssp. japonica (148 genes)
osaindica
Oryza sativa ssp. indica (131 genes)
ota
Ostreococcus tauri (3 genes)
ppa
Physcomitrella patens (28 genes)
ptr
Populus trichocarpa (113 genes)
rco
Ricinus communis (75 genes)
sbi
Sorghum bicolor (158 genes)
smo
Selaginella moellendorffii (39 genes)
tca
Theobroma cacao (95 genes)
vca
Volvox carteri (1 gene)
vvi
Vitis vinifera (40 genes)
zma
Zea mays (170 genes)



The gene family HOM000013 has 2150 genes in 25 species (156 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 108, showing 20 records out of 2150 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G02200 aly name=fgenesh2_kg.25__1__AT5G42200.1;pid=497165;prot=eq;tid=497165 + scaffold_25 No
AL1G03680 aly name=scaffold_100392.1;pid=887598;prot=eq;tid=919111 - scaffold_1 No
AL1G22020 aly name=fgenesh2_kg.1__2272__AT1G20823.1;pid=472318;prot=eq;tid=472318 + scaffold_1 No
AL1G24100 aly name=fgenesh2_kg.1__2444__AT1G22500.1;pid=472490;prot=eq;tid=472490 + scaffold_1 No
AL1G25750 aly name=fgenesh2_kg.1__2615__AT1G23980.1;pid=472661;prot=eq;tid=472661 - scaffold_1 No
AL1G28040 aly name=scaffold_103007.1;pid=890213;prot=eq;tid=921726 - scaffold_1 No
AL1G29180 aly name=fgenesh1_pm.C_scaffold_1002289;pid=313509;prot=eq;tid=313509 - scaffold_1 No
AL1G33680 aly name=fgenesh2_kg.1__3379__AT1G32361.1;pid=473425;prot=eq;tid=473425 + scaffold_1 No
AL1G37010 aly name=Al_scaffold_0001_3639;pid=881872;prot=eq;tid=913385 + scaffold_1 No
AL1G43080 aly name=fgenesh2_kg.1__4016__AT1G49200.1;pid=474062;prot=eq;tid=474062 + scaffold_1 No
AL1G43090 aly name=fgenesh2_kg.1__4017__AT1G49210.1;pid=474063;prot=eq;tid=474063 + scaffold_1 No
AL1G43100 aly name=fgenesh2_kg.1__4018__AT1G49220.1;pid=474064;prot=eq;tid=474064 + scaffold_1 No
AL1G43110 aly name=scaffold_104562.1;pid=891768;prot=eq;tid=923281 + scaffold_1 Yes
AL1G46770 aly name=scaffold_104976.1;pid=892182;prot=eq;tid=923695 - scaffold_1 No
AL1G48050 aly name=fgenesh2_kg.1__4375__AT1G53010.1;pid=474421;prot=eq;tid=474421 + scaffold_1 No
AL1G49000 aly name=scaffold_105224.1;pid=892430;prot=eq;tid=923943 + scaffold_1 No
AL2G01250 aly name=fgenesh2_kg.2__102__AT1G63840.1;pid=474972;prot=eq;tid=474972 + scaffold_2 No
AL2G15920 aly name=fgenesh2_kg.2__1024__AT1G67856.1;pid=475894;prot=eq;tid=475894 + scaffold_2 No
AL2G19540 aly name=scaffold_201988.1;pid=894914;prot=eq;tid=926427 + scaffold_2 No
AL2G20980 aly name=fgenesh2_kg.2__1483__AT1G72200.1;pid=476353;prot=eq;tid=476353 - scaffold_2 No
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outlier