Gene family 
- Id
- HOM000012
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO000871 (45 genes in 13 species)
ORTHO001189 (41 genes in 17 species)
ORTHO001479 (38 genes in 19 species)
View all sub-families (246)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (74 genes)
- ath
- Arabidopsis thaliana (74 genes)
- bdi
- Brachypodium distachyon (142 genes)
- cpa
- Carica papaya (57 genes)
- fve
- Fragaria vesca (67 genes)
- gma
- Glycine max (185 genes)
- lja
- Lotus japonicus (99 genes)
- mdo
- Malus domestica (168 genes)
- mes
- Manihot esculenta (104 genes)
- mtr
- Medicago truncatula (105 genes)
- osa
- Oryza sativa ssp. japonica (149 genes)
- osaindica
- Oryza sativa ssp. indica (171 genes)
- ppa
- Physcomitrella patens (57 genes)
- ptr
- Populus trichocarpa (117 genes)
- rco
- Ricinus communis (75 genes)
- sbi
- Sorghum bicolor (148 genes)
- smo
- Selaginella moellendorffii (82 genes)
- tca
- Theobroma cacao (80 genes)
- vvi
- Vitis vinifera (76 genes)
- zma
- Zea mays (144 genes)
The gene family HOM000012 has 2174 genes in 20 species (66 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000012
Page 1 of 109, showing 20 records out of 2174 total, starting on record 1, ending on 20
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AL0G09300 | aly | name=scaffold_53500001.1;pid=920775;prot=eq;tid=952288 | - | scaffold_535 | No | |
| AL1G04720 | aly | name=Al_scaffold_0001_457;pid=878690;prot=eq;tid=910203 | + | scaffold_1 | No | |
| AL1G04730 | aly | name=fgenesh2_kg.1__476__AT1G05240.1;pid=470522;prot=eq;tid=470522 | - | scaffold_1 | No | |
| AL1G04740 | aly | name=scaffold_100501.1;pid=887707;prot=eq;tid=919220 | - | scaffold_1 | No | |
| AL1G04750 | aly | name=fgenesh2_kg.1__477__AT1G05260.1;pid=470523;prot=eq;tid=470523 | + | scaffold_1 | No | |
| AL1G15350 | aly | name=scaffold_101631.1;pid=888837;prot=eq;tid=920350 | - | scaffold_1 | No | |
| AL1G15360 | aly | name=fgenesh1_pm.C_scaffold_1001233;pid=312453;prot=eq;tid=312453 | + | scaffold_1 | No | |
| AL1G25900 | aly | name=scaffold_102750.1;pid=889956;prot=eq;tid=921469 | + | scaffold_1 | No | |
| AL1G32240 | aly | name=fgenesh2_kg.1__3283__AT1G30870.1;pid=473329;prot=eq;tid=473329 | + | scaffold_1 | No | |
| AL1G39700 | aly | name=scaffold_104220.1;pid=891426;prot=eq;tid=922939 | + | scaffold_1 | No | |
| AL1G43810 | aly | name=Al_scaffold_0001_4306;pid=882539;prot=eq;tid=914052 | + | scaffold_1 | No | |
| AL2G17110 | aly | name=fgenesh2_kg.2__1142__AT1G68850.1;pid=476012;prot=eq;tid=476012 | - | scaffold_2 | No | |
| AL2G20380 | aly | name=scaffold_202081.1;pid=895007;prot=eq;tid=926520 | + | scaffold_2 | No | |
| AL2G26010 | aly | name=fgenesh1_pm.C_scaffold_2001655;pid=316622;prot=eq;tid=316622 | + | scaffold_2 | No | |
| AL2G26060 | aly | name=fgenesh1_pm.C_scaffold_2001658;pid=316625;prot=eq;tid=316625 | - | scaffold_2 | No | |
| AL3G00910 | aly | name=scaffold_300112.1;pid=896142;prot=eq;tid=927655 | + | scaffold_3 | No | |
| AL3G03110 | aly | name=scaffold_300350.1;pid=896380;prot=eq;tid=927893 | - | scaffold_3 | No | |
| AL3G03120 | aly | name=fgenesh2_kg.3__313__AT3G03670.1;pid=477612;prot=eq;tid=477612 | - | scaffold_3 | No | |
| AL3G18340 | aly | name=scaffold_302005.1;pid=898035;prot=eq;tid=929548 | + | scaffold_3 | No | |
| AL3G23920 | aly | name=scaffold_302598.1;pid=898628;prot=eq;tid=930141 | + | scaffold_3 | No |