Gene family 
- Id
- HOM000007
- Method
- BLASTP E_value=1e-05 MCL_I=2
- Sequences
- Sub-families
-
ORTHO000944 (44 genes in 18 species)
ORTHO001283 (40 genes in 23 species)
ORTHO001329 (39 genes in 16 species)
View all sub-families (347)
- Keywords
-
Overview of gene family content
- aly
- Arabidopsis lyrata (151 genes)
- ath
- Arabidopsis thaliana (143 genes)
- bdi
- Brachypodium distachyon (107 genes)
- cpa
- Carica papaya (102 genes)
- cre
- Chlamydomonas reinhardtii (14 genes)
- fve
- Fragaria vesca (119 genes)
- gma
- Glycine max (312 genes)
- lja
- Lotus japonicus (105 genes)
- mdo
- Malus domestica (293 genes)
- mes
- Manihot esculenta (197 genes)
- mrcc299
- Micromonas sp. RCC299 (9 genes)
- mtr
- Medicago truncatula (109 genes)
- olu
- Ostreococcus lucimarinus (9 genes)
- osa
- Oryza sativa ssp. japonica (127 genes)
- osaindica
- Oryza sativa ssp. indica (148 genes)
- ota
- Ostreococcus tauri (5 genes)
- ppa
- Physcomitrella patens (56 genes)
- ptr
- Populus trichocarpa (211 genes)
- rco
- Ricinus communis (132 genes)
- sbi
- Sorghum bicolor (122 genes)
- smo
- Selaginella moellendorffii (36 genes)
- tca
- Theobroma cacao (138 genes)
- vca
- Volvox carteri (17 genes)
- vvi
- Vitis vinifera (153 genes)
- zma
- Zea mays (185 genes)
The gene family HOM000007 has 3000 genes in 25 species (202 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:
- gene family : HOM000007
Page 1 of 150, showing 20 records out of 3000 total, starting on record 1, ending on 20
gene_id | species | description | comment | strand | chr | outlier |
---|---|---|---|---|---|---|
AL0G00040 | aly | name=fgenesh2_kg.9__1__AT4G13480.1;pid=497036;prot=eq;tid=497036 | - | scaffold_9 | No | |
AL0G05080 | aly | name=Al_scaffold_0136_3;pid=856498;prot=eq;tid=888011 | - | scaffold_136 | Yes | |
AL0G06930 | aly | name=fgenesh2_kg.277__1__AT5G58850.1;pid=497373;prot=eq;tid=497373 | + | scaffold_277 | No | |
AL0G08240 | aly | name=fgenesh2_kg.397__1__AT3G24310.1;pid=497421;prot=eq;tid=497421 | + | scaffold_397 | No | |
AL0G09590 | aly | name=Al_scaffold_0612_1;pid=856156;prot=eq;tid=887669 | + | scaffold_612 | No | |
AL1G00940 | aly | name=Al_scaffold_0001_92;pid=878325;prot=eq;tid=909838 | - | scaffold_1 | Yes | |
AL1G05700 | aly | name=fgenesh2_kg.1__590__AT1G06180.1;pid=470636;prot=eq;tid=470636 | + | scaffold_1 | No | |
AL1G08460 | aly | name=scaffold_100910.1;pid=888116;prot=eq;tid=919629 | - | scaffold_1 | No | |
AL1G09230 | aly | name=scaffold_100991.1;pid=888197;prot=eq;tid=919710 | + | scaffold_1 | No | |
AL1G15090 | aly | name=fgenesh2_kg.1__1561__AT1G14350.1;pid=471607;prot=eq;tid=471607 | + | scaffold_1 | No | |
AL1G17360 | aly | name=fgenesh1_pg.C_scaffold_1001492;pid=334927;prot=eq;tid=334927 | - | scaffold_1 | No | |
AL1G18880 | aly | name=scaffold_102001.1;pid=889207;prot=eq;tid=920720 | + | scaffold_1 | No | |
AL1G19480 | aly | name=fgenesh2_kg.1__2031__AT1G18570.1;pid=472077;prot=eq;tid=472077 | + | scaffold_1 | No | |
AL1G19620 | aly | name=fgenesh1_pg.C_scaffold_1001691;pid=335126;prot=eq;tid=335126 | + | scaffold_1 | No | |
AL1G19650 | aly | name=fgenesh1_pg.C_scaffold_1001692;pid=335127;prot=eq;tid=335127 | + | scaffold_1 | No | |
AL1G19900 | aly | name=fgenesh2_kg.1__2073__AT1G18960.1;pid=472119;prot=eq;tid=472119 | + | scaffold_1 | No | |
AL1G24230 | aly | name=fgenesh2_kg.1__2457__AT1G22640.1;pid=472503;prot=eq;tid=472503 | + | scaffold_1 | No | |
AL1G26820 | aly | name=fgenesh1_pg.C_scaffold_1002287;pid=335722;prot=eq;tid=335722 | - | scaffold_1 | No | |
AL1G35610 | aly | name=fgenesh1_pg.C_scaffold_1003053;pid=336488;prot=eq;tid=336488 | - | scaffold_1 | No | |
AL1G36020 | aly | name=fgenesh2_kg.1__3562__AT1G34670.1;pid=473608;prot=eq;tid=473608 | + | scaffold_1 | No |