Gene family  

Sub-families
ORTHO000111 (106 genes in 20 species)
ORTHO000141 (95 genes in 20 species)
ORTHO000248 (76 genes in 19 species)
View all sub-families (325)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (192 genes)
ath
Arabidopsis thaliana (179 genes)
bdi
Brachypodium distachyon (175 genes)
cpa
Carica papaya (147 genes)
cre
Chlamydomonas reinhardtii (4 genes)
fve
Fragaria vesca (166 genes)
gma
Glycine max (409 genes)
lja
Lotus japonicus (197 genes)
mdo
Malus domestica (346 genes)
mes
Manihot esculenta (335 genes)
mrcc299
Micromonas sp. RCC299 (2 genes)
mtr
Medicago truncatula (191 genes)
osa
Oryza sativa ssp. japonica (184 genes)
osaindica
Oryza sativa ssp. indica (199 genes)
ota
Ostreococcus tauri (1 gene)
ppa
Physcomitrella patens (96 genes)
ptr
Populus trichocarpa (295 genes)
rco
Ricinus communis (180 genes)
sbi
Sorghum bicolor (181 genes)
smo
Selaginella moellendorffii (83 genes)
tca
Theobroma cacao (165 genes)
vca
Volvox carteri (2 genes)
vvi
Vitis vinifera (160 genes)
zma
Zea mays (248 genes)



The gene family HOM000004 has 4137 genes in 24 species (213 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 207, showing 20 records out of 4137 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G00710 aly name=fgenesh1_pm.C_scaffold_9000038;pid=333010;prot=eq;tid=333010 + scaffold_9 No
AL0G03450 aly name=scaffold_6400002.1;pid=920855;prot=eq;tid=952368 - scaffold_64 No
AL0G03690 aly name=fgenesh2_kg.71__3__AT5G60080.1;pid=497233;prot=eq;tid=497233 - scaffold_71 No
AL0G03700 aly name=Al_scaffold_0071_4;pid=887149;prot=eq;tid=918662 - scaffold_71 No
AL0G04220 aly name=scaffold_9200009.1;pid=921086;prot=eq;tid=952599 + scaffold_92 No
AL0G07510 aly name=Al_scaffold_0310_2;pid=887124;prot=eq;tid=918637 + scaffold_310 No
AL0G10780 aly name=Al_scaffold_0823_1;pid=855843;prot=eq;tid=887356 + scaffold_823 No
AL0G10790 aly name=fgenesh1_pg.C_scaffold_823000002;pid=359733;prot=eq;tid=359733 + scaffold_823 No
AL1G00750 aly name=fgenesh2_kg.1__79__AT1G01540.2;pid=470125;prot=eq;tid=470125 - scaffold_1 No
AL1G06250 aly name=scaffold_100666.1;pid=887872;prot=eq;tid=919385 - scaffold_1 No
AL1G07160 aly name=fgenesh2_kg.1__738__AT1G07570.2;pid=470784;prot=eq;tid=470784 - scaffold_1 No
AL1G07480 aly name=fgenesh2_kg.1__775__AT1G07870.1;pid=470821;prot=eq;tid=470821 - scaffold_1 No
AL1G09130 aly name=fgenesh1_pm.C_scaffold_1000767;pid=311987;prot=eq;tid=311987 - scaffold_1 No
AL1G10630 aly name=scaffold_101132.1;pid=888338;prot=eq;tid=919851 - scaffold_1 No
AL1G11270 aly name=scaffold_101201.1;pid=888407;prot=eq;tid=919920 + scaffold_1 No
AL1G15110 aly name=fgenesh2_kg.1__1562__AT1G14370.1;pid=471608;prot=eq;tid=471608 + scaffold_1 No
AL1G21790 aly name=fgenesh2_kg.1__2253__AT1G20650.1;pid=472299;prot=eq;tid=472299 - scaffold_1 No
AL1G22810 aly name=fgenesh2_kg.1__2349__AT1G21590.1;pid=472395;prot=eq;tid=472395 - scaffold_1 No
AL1G25340 aly name=fgenesh2_kg.1__2571__AT1G23540.1;pid=472617;prot=eq;tid=472617 - scaffold_1 No
AL1G25790 aly name=fgenesh2_kg.1__2617__AT1G24030.2;pid=472663;prot=eq;tid=472663 + scaffold_1 No
<< previous
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier