Gene family  

Sub-families
ORTHO000158 (90 genes in 9 species)
ORTHO001055 (43 genes in 5 species)
ORTHO002359 (32 genes in 18 species)
View all sub-families (314)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (214 genes)
ath
Arabidopsis thaliana (219 genes)
bdi
Brachypodium distachyon (192 genes)
cpa
Carica papaya (197 genes)
cre
Chlamydomonas reinhardtii (7 genes)
fve
Fragaria vesca (247 genes)
gma
Glycine max (369 genes)
lja
Lotus japonicus (234 genes)
mdo
Malus domestica (471 genes)
mes
Manihot esculenta (207 genes)
mrcc299
Micromonas sp. RCC299 (11 genes)
mtr
Medicago truncatula (257 genes)
olu
Ostreococcus lucimarinus (14 genes)
osa
Oryza sativa ssp. japonica (203 genes)
osaindica
Oryza sativa ssp. indica (206 genes)
ota
Ostreococcus tauri (10 genes)
ppa
Physcomitrella patens (64 genes)
ptr
Populus trichocarpa (280 genes)
rco
Ricinus communis (206 genes)
sbi
Sorghum bicolor (233 genes)
smo
Selaginella moellendorffii (156 genes)
tca
Theobroma cacao (212 genes)
vca
Volvox carteri (6 genes)
vvi
Vitis vinifera (165 genes)
zma
Zea mays (238 genes)



The gene family HOM000003 has 4618 genes in 25 species (438 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
This page uses the Flash plugin.




Index of genes with 1 constraints:

Page 1 of 231, showing 20 records out of 4618 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G03050 aly name=fgenesh2_kg.53__1__AT2G36240.1;pid=497209;prot=eq;tid=497209 - scaffold_53 No
AL0G03180 aly name=fgenesh2_kg.57__1__AT3G23020.1;pid=497210;prot=eq;tid=497210 + scaffold_57 No
AL0G03190 aly name=scaffold_5700002.1;pid=920796;prot=eq;tid=952309 + scaffold_57 Yes
AL0G05320 aly name=fgenesh1_pg.C_scaffold_159000001;pid=359368;prot=eq;tid=359368 - scaffold_159 No
AL0G10200 aly name=fgenesh2_kg.711__1__AT2G43210.2;pid=497521;prot=eq;tid=497521 + scaffold_711 Yes
AL1G00250 aly name=fgenesh1_pm.C_scaffold_1000020;pid=311240;prot=eq;tid=311240 + scaffold_1 No
AL1G00330 aly name=fgenesh2_kg.1__31__AT1G01970.1;pid=470077;prot=eq;tid=470077 - scaffold_1 No
AL1G01640 aly name=fgenesh2_kg.1__156__AT1G02420.1;pid=470202;prot=eq;tid=470202 + scaffold_1 No
AL1G02870 aly name=fgenesh1_pm.C_scaffold_1000233;pid=311453;prot=eq;tid=311453 - scaffold_1 No
AL1G05150 aly name=fgenesh2_kg.1__516__AT1G05600.1;pid=470562;prot=eq;tid=470562 + scaffold_1 No
AL1G05220 aly name=fgenesh2_kg.1__525__AT1G05670.1;pid=470571;prot=eq;tid=470571 - scaffold_1 No
AL1G06160 aly name=fgenesh2_kg.1__633__AT1G06580.1;pid=470679;prot=eq;tid=470679 - scaffold_1 No
AL1G06260 aly name=fgenesh1_pm.C_scaffold_1000521;pid=311741;prot=eq;tid=311741 - scaffold_1 No
AL1G07320 aly name=fgenesh2_kg.1__758__AT1G07740.1;pid=470804;prot=eq;tid=470804 - scaffold_1 No
AL1G08270 aly name=fgenesh2_kg.1__879__AT1G08610.1;pid=470925;prot=eq;tid=470925 - scaffold_1 No
AL1G09390 aly name=scaffold_101007.1;pid=888213;prot=eq;tid=919726 - scaffold_1 No
AL1G09580 aly name=fgenesh2_kg.1__1040__AT1G09820.1;pid=471086;prot=eq;tid=471086 - scaffold_1 No
AL1G09660 aly name=fgenesh2_kg.1__1055__AT1G09900.1;pid=471101;prot=eq;tid=471101 + scaffold_1 No
AL1G10120 aly name=fgenesh2_kg.1__1092__AT1G10270.1;pid=471138;prot=eq;tid=471138 + scaffold_1 No
AL1G11070 aly name=scaffold_101182.1;pid=888388;prot=eq;tid=919901 + scaffold_1 No
<< previous
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier