Gene family  

Sub-families
ORTHO000008 (327 genes in 18 species)
ORTHO000048 (166 genes in 20 species)
ORTHO000062 (144 genes in 17 species)
View all sub-families (369)
 
Keywords


Overview of gene family content




aly
Arabidopsis lyrata (156 genes)
ath
Arabidopsis thaliana (122 genes)
bdi
Brachypodium distachyon (202 genes)
cpa
Carica papaya (123 genes)
cre
Chlamydomonas reinhardtii (17 genes)
fve
Fragaria vesca (230 genes)
gma
Glycine max (317 genes)
lja
Lotus japonicus (167 genes)
mdo
Malus domestica (760 genes)
mes
Manihot esculenta (232 genes)
mrcc299
Micromonas sp. RCC299 (50 genes)
mtr
Medicago truncatula (300 genes)
olu
Ostreococcus lucimarinus (5 genes)
osa
Oryza sativa ssp. japonica (307 genes)
osaindica
Oryza sativa ssp. indica (351 genes)
ota
Ostreococcus tauri (6 genes)
ppa
Physcomitrella patens (120 genes)
ptr
Populus trichocarpa (359 genes)
rco
Ricinus communis (187 genes)
sbi
Sorghum bicolor (256 genes)
smo
Selaginella moellendorffii (164 genes)
tca
Theobroma cacao (282 genes)
vca
Volvox carteri (10 genes)
vvi
Vitis vinifera (209 genes)
zma
Zea mays (191 genes)



The gene family HOM000002 has 5123 genes in 25 species (345 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
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Index of genes with 1 constraints:

Page 1 of 257, showing 20 records out of 5123 total, starting on record 1, ending on 20

gene_id species description comment strand chr outlier
AL0G06260 aly name=scaffold_23000001.1;pid=920368;prot=eq;tid=951881 - scaffold_230 Yes
AL0G10050 aly name=scaffold_68500002.1;pid=920889;prot=eq;tid=952402 - scaffold_685 Yes
AL1G02740 aly name=fgenesh2_kg.1__272__AT1G03440.1;pid=470318;prot=eq;tid=470318 + scaffold_1 No
AL1G06750 aly name=fgenesh1_pg.C_scaffold_1000580;pid=334015;prot=eq;tid=334015 + scaffold_1 Yes
AL1G06760 aly name=Al_scaffold_0001_660;pid=878893;prot=eq;tid=910406 - scaffold_1 No
AL1G08250 aly name=fgenesh2_kg.1__877__AT1G08590.1;pid=470923;prot=eq;tid=470923 + scaffold_1 No
AL1G09760 aly name=scaffold_101044.1;pid=888250;prot=eq;tid=919763 + scaffold_1 No
AL1G09820 aly name=scaffold_101050.1;pid=888256;prot=eq;tid=919769 + scaffold_1 No
AL1G12830 aly name=scaffold_101365.1;pid=888571;prot=eq;tid=920084 + scaffold_1 No
AL1G13860 aly name=fgenesh2_kg.1__1433__AT1G13230.1;pid=471479;prot=eq;tid=471479 + scaffold_1 No
AL1G14640 aly name=fgenesh2_kg.1__1505__AT1G13910.1;pid=471551;prot=eq;tid=471551 + scaffold_1 No
AL1G18110 aly name=scaffold_101915.1;pid=889121;prot=eq;tid=920634 + scaffold_1 No
AL1G18130 aly name=scaffold_101917.1;pid=889123;prot=eq;tid=920636 - scaffold_1 No
AL1G18710 aly name=fgenesh2_kg.1__1941__AT1G17750.1;pid=471987;prot=eq;tid=471987 + scaffold_1 No
AL1G26220 aly name=scaffold_102786.1;pid=889992;prot=eq;tid=921505 + scaffold_1 No
AL1G29680 aly name=fgenesh2_kg.1__3017__AT1G28440.1;pid=473063;prot=eq;tid=473063 + scaffold_1 No
AL1G34870 aly name=scaffold_103732.1;pid=890938;prot=eq;tid=922451 + scaffold_1 No
AL1G34880 aly name=Al_scaffold_0001_3431;pid=881664;prot=eq;tid=913177 + scaffold_1 No
AL1G34890 aly name=scaffold_103741.1;pid=890947;prot=eq;tid=922460 + scaffold_1 No
AL1G34900 aly name=scaffold_103742.1;pid=890948;prot=eq;tid=922461 + scaffold_1 No
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