Associated InterPro data

Gene family
ORTHO002402

The indicated percentages are obtained by comparing them against the corresponding number of genes in the indicated gene family.
motif_id num_genes ath osa ptr vvi ppa cre olu sbi cpa vca smo aly gma lja mes mtr rco zma bdi ota mrcc299 osaindica mdo fve tca description
IPR002121 27
84.4%
2
100.0%
1
100.0%
2
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
2
100.0%
3
75.0%
1
50.0%
1
50.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
Helicase/RNase D C-terminal, HRDC domain
IPR002562 27
84.4%
2
100.0%
1
100.0%
1
50.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
2
100.0%
3
75.0%
1
50.0%
1
50.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
3'-5' exonuclease
IPR012337 27
84.4%
2
100.0%
1
100.0%
1
50.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
2
100.0%
3
75.0%
1
50.0%
1
50.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
Polynucleotidyl transferase, ribonuclease H fold
IPR012588 7
21.9%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
25.0%
1
50.0%
1
50.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
1
100.0%
Exosome-associated factor Rrp6, N-terminal

Associated GO term data

Gene family
ORTHO002402

The indicated percentages are obtained by comparing them against the corresponding number of genes in the indicated gene family.
GO term type num_genes ath osa ptr vvi ppa cre olu sbi cpa vca smo aly gma lja mes mtr rco zma bdi ota mrcc299 osaindica mdo fve tca description
GO:0003676 MF 32
100.0%
2
100.0%
1
100.0%
2
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
2
100.0%
4
100.0%
2
100.0%
2
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
nucleic acid binding
GO:0008408 MF 26
81.3%
2
100.0%
1
100.0%
1
50.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
2
100.0%
3
75.0%
1
50.0%
1
50.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
3'-5' exonuclease activity
GO:0005622 CC 25
78.1%
2
100.0%
1
100.0%
2
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
2
100.0%
3
75.0%
1
50.0%
1
50.0%
0
0.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
intracellular
GO:0006139 BP 20
62.5%
2
100.0%
1
100.0%
1
50.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
1
100.0%
1
100.0%
2
100.0%
2
50.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
cellular nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GO:0000176 CC 7
21.9%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
25.0%
1
50.0%
1
50.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
1
100.0%
nuclear exosome (RNase complex)
GO:0006396 BP 7
21.9%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
25.0%
1
50.0%
1
50.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
1
100.0%
RNA processing
GO:0009536 CC 5
15.6%
0
0.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
1
100.0%
0
0.0%
0
0.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
plastid
GO:0000175 MF 1
3.1%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
3'-5'-exoribonuclease activity
GO:0004534 MF 1
3.1%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
1
100.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
0
0.0%
5'-3' exoribonuclease activity

Note : these statistics do not include parent-child relationships between GO terms! Click on the GO term to retrieve all genes annotated with a specific term.