Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_tca_57
Cluster type
GO
Species
Theobroma cacao
Chromosome
Tc04
E-value
0.0000078795
GO label
GO:0009987
GO description
cellular process
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM0000025123282125
HOM0000044137165124
HOM0000063414165120
HOM0000092595123221
HOM0000171906109122
HOM000027165945125
HOM000043125657125
HOM00007188539125
HOM00007685128125
HOM00012056522122
HOM00013353127121
HOM00017941414125
HOM00019737516125
HOM00020236710125
HOM00033526313120
HOM0003902358125
HOM0004012325119
HOM0004822029123
HOM00051719114125
HOM0005501826124
HOM0005551806125
HOM0005621786125
HOM0005751755123
HOM0005951685125
HOM0006071677125
HOM0006121655121
HOM0006141657124
HOM0006191646123
HOM0007391466123
HOM0007701415125
HOM0007751404123
HOM0008121347125
HOM0008361314125
HOM0009141228125
HOM0009611173123
HOM0010161116123
HOM0010291094123
HOM0010341092124
HOM0010811054123
HOM001150993123
HOM001155984125
HOM001193962124
HOM001197964121
HOM001311885125
HOM001342873120
HOM001436823122
HOM001893652124
HOM002078602124
HOM002149583123
HOM002286564119
HOM002299552124
HOM002692471123
HOM002716473119
HOM002742473119
HOM002887452121
HOM003026431120
HOM003137412122
HOM003172411125
HOM003593371123
HOM004238331124
HOM004406322119
HOM004407322123
HOM004553311124
HOM004611311125
HOM004664301122
HOM005963241119

Gene information

In cluster Gene id Description Gene type Gene family
V TC04G001320Coding geneHOM004238 ORTHO003992
X TC04G001330Coding geneHOM000690 ORTHO011783
X TC04G001340Coding geneHOM001139 ORTHO016561
X TC04G001350Coding geneHOM000149 ORTHO009635
X TC04G001360Coding geneHOM001174 ORTHO000289
V TC04G001370Coding geneHOM002078 ORTHO005901
V TC04G001380Coding geneHOM000006 ORTHO012095
X TC04G001390Coding geneHOM000878 ORTHO006545
X TC04G001400Coding geneHOM000400 ORTHO018678
X TC04G001410Coding genesingleton
X TC04G001420Coding geneHOM000776 ORTHO006242
X TC04G001430Coding geneHOM000001 ORTHO013233
V TC04G001440Coding geneHOM000812 ORTHO015240
X TC04G001450Coding geneHOM008179 ORTHO015316
V TC04G001460Coding geneHOM002299 ORTHO012840
V TC04G001470Coding geneHOM003593 ORTHO004279
X TC04G001480Coding geneHOM000186 ORTHO005228
X TC04G001490Coding geneHOM000501 ORTHO002307
X TC04G001500Coding geneHOM000003 ORTHO008474
X TC04G001510Coding geneHOM002916 ORTHO005227
X TC04G001520Coding geneHOM005898 ORTHO007958
X TC04G001530Coding geneHOM000003 ORTHO011518
X TC04G001540Coding geneHOM004375 ORTHO005132
X TC04G001550Coding geneHOM001316 ORTHO004549
X TC04G001560Coding geneHOM000793 ORTHO011288
X TC04G001570Coding geneHOM000098 ORTHO011393
V TC04G001580Coding geneHOM000043 ORTHO004659
X TC04G001590Coding geneHOM003540 ORTHO003093
X TC04G001600Coding geneHOM000005 ORTHO000744
V TC04G001610Coding geneHOM003172 ORTHO003136
X TC04G001620Coding geneHOM000313 ORTHO001509
V TC04G001630Coding geneHOM000607 ORTHO000848
X TC04G001640Coding geneHOM011776 ORTHO047785
X TC04G001650Coding geneHOM003573 ORTHO013171
X TC04G001660Coding geneHOM006070 ORTHO009634
X TC04G001670Coding geneHOM004782 ORTHO005919
V TC04G001680Coding geneHOM000071 ORTHO004928
X TC04G001690Coding genesingleton
X TC04G001700Coding geneHOM003333 ORTHO003345
X TC04G001710Coding geneHOM000057 ORTHO110471
X TC04G001720Coding geneHOM000057 ORTHO013170
X TC04G001730Coding geneHOM005761 ORTHO007456
V TC04G001740Coding geneHOM000076 ORTHO000171
X TC04G001750Coding geneHOM001567 ORTHO014694
X TC04G001760Coding geneHOM000047 ORTHO014134
X TC04G001770Coding geneHOM003155 ORTHO027712
X TC04G001780Coding geneHOM000093 ORTHO012319
X TC04G001790Coding geneHOM000093 ORTHO076000
X TC04G001800Coding geneHOM000093 ORTHO206323
X TC04G001810Coding geneHOM000597 ORTHO025541
X TC04G001811Transposon
X TC04G001820Coding geneHOM000157 ORTHO000001
X TC04G001830Coding geneHOM000093 ORTHO076000
X TC04G001840Coding geneHOM000093 ORTHO012319
X TC04G001841Transposon
X TC04G001850Coding genesingleton
X TC04G001851Transposon
X TC04G001860Transposon
V TC04G001870Coding geneHOM002149 ORTHO023647
V TC04G001880Coding geneHOM000555 ORTHO012981
X TC04G001890Coding geneHOM000093 ORTHO090696
X TC04G001900Coding geneHOM005173 ORTHO006748
V TC04G001910Coding geneHOM000027 ORTHO010119
X TC04G001920Coding geneHOM000659 ORTHO010677
X TC04G001930Coding geneHOM000495 ORTHO007957
V TC04G001940Coding geneHOM001342 ORTHO000406
X TC04G001950Coding geneHOM002190 ORTHO005820
X TC04G001960Coding geneHOM002190 ORTHO005645
V TC04G001970Coding geneHOM004664 ORTHO008037
X TC04G001980Coding geneHOM000434 ORTHO015224
X TC04G001990Coding geneHOM004872 ORTHO005819
X TC04G002000Coding geneHOM000086 ORTHO012592
X TC04G002010Coding geneHOM000086 ORTHO126130
X TC04G002020Coding geneHOM000086 ORTHO075829
V TC04G002030Coding geneHOM004611 ORTHO003266
X TC04G002040Coding geneHOM006465 ORTHO010202
X TC04G002050Transposon
X TC04G002060Transposon
X TC04G002061Transposon
X TC04G002062Transposon
X TC04G002063Transposon
X TC04G002070Coding geneHOM000914 ORTHO000201
X TC04G002080Coding geneHOM000110 ORTHO000457
V TC04G002090Coding geneHOM000612 ORTHO008495
X TC04G002100Coding geneHOM002120 ORTHO007396
X TC04G002110Coding geneHOM002120 ORTHO005862
V TC04G002120Coding geneHOM000009 ORTHO000181
X TC04G002130Coding geneHOM000032 ORTHO000758
V TC04G002140Coding geneHOM002692 ORTHO001861
X TC04G002150Coding geneHOM000072 ORTHO243407
X TC04G002160Coding geneHOM000151 ORTHO021191
X TC04G002170Coding geneHOM002051 ORTHO004954
X TC04G002171Transposon
X TC04G002180Coding geneHOM006685 ORTHO013169
X TC04G002181Transposon
X TC04G002190Coding geneHOM000790 ORTHO000461
X TC04G002200Coding geneHOM000790 ORTHO000461
X TC04G002210Coding genesingleton
X TC04G002220Coding geneHOM000424 ORTHO008765
V TC04G002230Coding geneHOM003026 ORTHO005336
X TC04G002240Coding geneHOM003423 ORTHO002423
X TC04G002250Coding genesingleton
V TC04G002260Coding geneHOM000120 ORTHO002355
X TC04G002270Coding geneHOM004775 ORTHO003160
V TC04G002280Coding geneHOM002286 ORTHO009618
V TC04G002290Coding geneHOM001155 ORTHO003062
X TC04G002300Transposon
X TC04G002310Coding geneHOM000060 ORTHO038037
X TC04G002311Transposon
X TC04G002320Coding geneHOM000163 ORTHO000442
X TC04G002330Coding geneHOM000809 ORTHO012590
X TC04G002340Transposon
X TC04G002341Transposon
X TC04G002350Coding geneHOM000139 ORTHO020128
X TC04G002360Coding geneHOM000650 ORTHO008036
X TC04G002370Coding geneHOM000003 ORTHO008035
X TC04G002380Coding geneHOM001354 ORTHO003922
X TC04G002390Coding geneHOM000018 ORTHO040772
X TC04G002400Coding geneHOM003798 ORTHO000370
X TC04G002410Coding geneHOM001328 ORTHO261368
X TC04G002420Coding geneHOM001328 ORTHO009418
X TC04G002430Coding geneHOM000007 ORTHO012697
X TC04G002440Coding geneHOM000007 ORTHO008675
X TC04G002450Coding geneHOM001303 ORTHO076001
X TC04G002460Transposon
X TC04G002470Coding geneHOM025927 ORTHO076002
V TC04G002480Coding geneHOM000517 ORTHO075830
X TC04G002490Coding geneHOM001871 ORTHO007928
X TC04G002500Coding geneHOM002480 ORTHO001575
X TC04G002510Coding geneHOM003089 ORTHO012653
X TC04G002520Coding geneHOM003473 ORTHO005644
X TC04G002530Coding geneHOM001977 ORTHO016892
X TC04G002540Transposon
X TC04G002550Coding geneHOM001476 ORTHO008163
X TC04G002560Coding geneHOM001476 ORTHO008163
X TC04G002570Coding geneHOM001476 ORTHO004658
V TC04G002580Coding geneHOM004407 ORTHO006030
V TC04G002590Coding geneHOM001893 ORTHO001178
X TC04G002600Coding geneHOM000396 ORTHO209785
X TC04G002610Coding geneHOM001328 ORTHO009754
X TC04G002620Coding geneHOM000018 ORTHO040772
X TC04G002630Coding geneHOM000074 ORTHO000370
X TC04G002640Coding geneHOM000243 ORTHO000185
X TC04G002650Coding geneHOM000243 ORTHO003624
X TC04G002660Coding geneHOM000140 ORTHO007252
V TC04G002670Coding geneHOM000836 ORTHO003092
X TC04G002680Coding geneHOM002245 ORTHO018000
X TC04G002690Coding geneHOM000390 ORTHO003205
V TC04G002700Coding geneHOM000390 ORTHO000196
V TC04G002710Coding geneHOM001034 ORTHO001470
X TC04G002720Coding genesingleton
V TC04G002730Coding geneHOM000770 ORTHO008646
X TC04G002740Coding geneHOM005217 ORTHO004953
X TC04G002750Coding geneHOM002074 ORTHO001122
X TC04G002760Coding geneHOM000311 ORTHO000654
X TC04G002770Coding geneHOM000311 ORTHO000654
X TC04G002780Coding geneHOM000227 ORTHO006625
X TC04G002790Coding geneHOM000227 ORTHO011392
X TC04G002800Coding geneHOM002103 ORTHO008674
X TC04G002810Coding geneHOM002103 ORTHO008674
X TC04G002811Transposon
X TC04G002820Coding geneHOM002927 ORTHO001469
X TC04G002830Coding geneHOM003029 ORTHO024420
X TC04G002840Coding geneHOM005118 ORTHO006624
X TC04G002850Coding geneHOM000212 ORTHO018359
X TC04G002860Coding geneHOM004282 ORTHO003370
V TC04G002870Coding geneHOM004553 ORTHO005226
X TC04G002880Coding geneHOM005613 ORTHO005225
X TC04G002890Coding geneHOM000006 ORTHO210462
X TC04G002900Coding geneHOM000056 ORTHO229949
X TC04G002901Transposon
X TC04G002902Transposon
X TC04G002910Coding geneHOM000006 ORTHO137617
V TC04G002920Coding geneHOM000197 ORTHO003811
X TC04G002930Coding geneHOM000520 ORTHO018349
X TC04G002940Coding geneHOM002204 ORTHO002787
V TC04G002950Coding geneHOM005963 ORTHO008034
X TC04G002960Coding geneHOM002969 ORTHO004972
X TC04G002961Transposon
V TC04G002970Coding geneHOM000017 ORTHO001378
X TC04G002980Coding geneHOM001360 ORTHO013543
V TC04G002990Coding geneHOM001311 ORTHO010676
X TC04G003000Coding geneHOM000081 ORTHO016994
X TC04G003010Transposon
X TC04G003020Coding geneHOM000095 ORTHO010524
X TC04G003030Transposon
X TC04G003040Coding geneHOM001904 ORTHO076003
X TC04G003041Transposon
X TC04G003050Transposon
V TC04G003060Coding geneHOM000002 ORTHO231923
X TC04G003070Coding geneHOM000894 ORTHO025558
X TC04G003080Transposon
X TC04G003081Transposon
X TC04G003090Coding geneHOM000081 ORTHO025562
X TC04G003100Transposon
X TC04G003101Transposon
X TC04G003110Coding geneHOM002520 ORTHO009086
V TC04G003120Coding geneHOM000009 ORTHO030932
X TC04G003130Coding geneHOM001904 ORTHO076004
X TC04G003140Coding geneHOM000081 ORTHO025562
X TC04G003150Coding geneHOM001904 ORTHO076004
X TC04G003151Transposon
X TC04G003152Transposon
X TC04G003160Coding geneHOM000081 ORTHO025562
X TC04G003170Coding geneHOM000081 ORTHO025562
X TC04G003180Coding geneHOM001904 ORTHO076003
X TC04G003190Coding geneHOM000039 ORTHO091439
X TC04G003200Coding geneHOM000413 ORTHO028178
X TC04G003210Coding geneHOM000206 ORTHO018898
X TC04G003220Coding geneHOM002476 ORTHO024238
X TC04G003230Coding geneHOM003484 ORTHO014904
X TC04G003240Coding geneHOM005750 ORTHO007070
X TC04G003250Coding geneHOM002493 ORTHO001000
X TC04G003260Coding geneHOM000477 ORTHO007251
X TC04G003270Coding geneHOM005283 ORTHO006544
X TC04G003280Coding geneHOM004158 ORTHO010118
X TC04G003290Coding geneHOM000318 ORTHO017515
X TC04G003291Transposon
X TC04G003292Transposon
X TC04G003293Transposon
X TC04G003294Transposon
X TC04G003295Transposon
X TC04G003300Coding geneHOM000208 ORTHO007071
X TC04G003310Coding geneHOM000093 ORTHO013542
X TC04G003320Coding geneHOM000025 ORTHO000509
X TC04G003330Coding geneHOM002042 ORTHO000509
X TC04G003340Coding geneHOM000762 ORTHO010792
V TC04G003350Coding geneHOM002887 ORTHO001265
X TC04G003360Coding geneHOM000493 ORTHO190889
X TC04G003370Transposon
V TC04G003380Coding geneHOM000595 ORTHO000159
X TC04G003390Coding geneHOM003848 ORTHO007956
X TC04G003400Transposon
X TC04G003410Coding geneHOM000022 ORTHO249385
X TC04G003420Transposon
X TC04G003430Coding geneHOM000022 ORTHO000349
X TC04G003440Coding geneHOM000022 ORTHO000349
X TC04G003450Coding geneHOM008917 ORTHO025563
X TC04G003460Coding geneHOM000002 ORTHO127361
V TC04G003470Coding geneHOM000914 ORTHO000201
X TC04G003480Coding geneHOM000055 ORTHO013597
X TC04G003490Coding geneHOM000627 ORTHO006623
X TC04G003500Coding geneHOM003107 ORTHO012695
X TC04G003510Coding geneHOM001829 ORTHO004906
V TC04G003520Coding geneHOM000004 ORTHO012454
X TC04G003530Coding geneHOM000014 ORTHO008984
X TC04G003531Transposon
X TC04G003540Coding geneHOM000081 ORTHO025562
X TC04G003550Coding geneHOM000056 ORTHO012844
X TC04G003551Transposon
X TC04G003560Transposon
X TC04G003561Transposon
X TC04G003570Coding geneHOM002234 ORTHO000625
X TC04G003580Coding geneHOM000157 ORTHO000001
X TC04G003590Coding geneHOM001438 ORTHO199842
X TC04G003600Coding geneHOM000200 ORTHO075928
X TC04G003610Coding geneHOM012485 ORTHO025537
X TC04G003620Coding geneHOM012485 ORTHO025537
V TC04G003630Coding geneHOM001193 ORTHO001668
X TC04G003640Coding geneHOM000215 ORTHO004312
V TC04G003650Coding geneHOM002716 ORTHO012703
V TC04G003660Coding geneHOM000961 ORTHO001130
X TC04G003670Coding geneHOM000666 ORTHO001129
V TC04G003680Coding geneHOM001029 ORTHO018320
X TC04G003690Coding geneHOM007595 ORTHO014551
X TC04G003700Coding geneHOM001370 ORTHO008905
V TC04G003710Coding geneHOM001197 ORTHO010535
V TC04G003720Coding geneHOM001016 ORTHO003686
X TC04G003730Coding geneHOM002820 ORTHO011654
X TC04G003740Coding geneHOM007710 ORTHO016123
X TC04G003750Coding genesingleton
V TC04G003760Coding geneHOM000482 ORTHO013477
X TC04G003770Coding geneHOM007653 ORTHO015132
X TC04G003780Coding geneHOM000666 ORTHO001129
V TC04G003790Coding geneHOM000614 ORTHO003780
V TC04G003800Coding geneHOM001081 ORTHO001805
X TC04G003810Coding geneHOM000462 ORTHO002967
V TC04G003820Coding geneHOM000202 ORTHO024091
V TC04G003830Coding geneHOM001436 ORTHO001236
V TC04G003840Coding geneHOM001150 ORTHO002149
V TC04G003850Coding geneHOM000775 ORTHO001077
X TC04G003860Coding geneHOM000211 ORTHO001337
X TC04G003870Coding geneHOM002384 ORTHO173147
V TC04G003880Coding geneHOM000550 ORTHO001338
X TC04G003890Coding geneHOM012102 ORTHO025791
V TC04G003900Coding geneHOM000619 ORTHO002407
V TC04G003910Coding geneHOM000575 ORTHO001434
V TC04G003920Coding geneHOM002742 ORTHO001806
X TC04G003930Coding geneHOM000211 ORTHO162059
V TC04G003940Coding geneHOM003137 ORTHO002663
X TC04G003950Coding geneHOM000215 ORTHO002968
V TC04G003960Coding geneHOM004406 ORTHO004310
X TC04G003970Coding geneHOM000462 ORTHO004309
V TC04G003980Coding geneHOM000739 ORTHO001954
X TC04G003621Transposon
X TC04G003990Coding geneHOM000149 ORTHO001344
X TC04G004000Coding genesingleton
X TC04G004010Coding geneHOM000042 ORTHO008279
X TC04G004020Coding genesingleton
X TC04G004030Coding geneHOM003350 ORTHO009633
X TC04G004040Coding geneHOM000062 ORTHO001614
V TC04G004050Coding geneHOM000179 ORTHO008672
V TC04G004060Coding geneHOM000562 ORTHO000681
X TC04G004070Coding geneHOM003382 ORTHO001649
V TC04G004080Coding geneHOM000133 ORTHO028769
X TC04G004090Coding geneHOM000003 ORTHO009501
X TC04G004100Coding geneHOM000463 ORTHO009982
V TC04G004110Coding geneHOM000335 ORTHO008673
V TC04G004120Coding geneHOM000401 ORTHO000051