Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_osaindica_124
Cluster type
GO
Species
Oryza sativa ssp. indica
Chromosome
Chr12
E-value
0.000644422
GO label
GO:0080090
GO description
regulation of primary metabolic process
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM0000181862104220
HOM000028165297125
HOM0000531046412123
HOM00007585241420
HOM00009275035125
HOM00010562633122
HOM00031027318125
HOM00036524810125
HOM00055318213121
HOM0008051358120
HOM0011201017120
HOM001673711236
HOM0091407333
HOM0157383112
HOM0191372112
HOM0192502112
HOM0274632112

Gene information

In cluster Gene id Description Gene type Gene family
V OSINDICA_12G28000source=BGI China;type=FgeneSH;Coding geneHOM000053 ORTHO017811
V OSINDICA_12G28010source=BGI China;type=FgeneSH;Coding geneHOM001673 ORTHO039244
X OSINDICA_12G28020source=BGI;type=TE by repeatmask;Transposon
V OSINDICA_12G28030source=BGI China;type=FgeneSH;Coding geneHOM001673 ORTHO070512
V OSINDICA_12G28040source=BGI China;type=FgeneSH;Coding geneHOM019137 ORTHO039245
X OSINDICA_12G28050source=BGI;type=TE by repeatmask;Transposon
V OSINDICA_12G28060source=BGI China;type=FgeneSH;Coding geneHOM001673 ORTHO019560
X OSINDICA_12G28070source=BGI China;type=FgeneSH;Coding geneHOM001105 ORTHO070513
X OSINDICA_12G28080source=BGI China;type=FgeneSH;Coding geneHOM003476 ORTHO199983
X OSINDICA_12G28090source=BGI China;type=FgeneSH;Coding geneHOM028730 ORTHO070514
X OSINDICA_12G28100source=BGI China;type=FgeneSH;Coding geneHOM000091 ORTHO014501
X OSINDICA_12G28110source=BGI China;type=FgeneSH;Coding geneHOM015984 ORTHO070515
X OSINDICA_12G28120source=BGI China;type=FgeneSH;Coding geneHOM013631 ORTHO030218
X OSINDICA_12G28130source=BGI China;type=FgeneSH;Coding geneHOM000845 ORTHO001457
X OSINDICA_12G28140source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28150source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G28160source=BGI China;type=FgeneSH;Coding geneHOM026352 ORTHO070517
X OSINDICA_12G28170source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28180source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28190source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G28200source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28210source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28220source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28230source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28240source=BGI China;type=FgeneSH;Coding geneHOM000481 ORTHO030219
X OSINDICA_12G28250source=BGI China;type=FgeneSH;Coding geneHOM026332 ORTHO070518
X OSINDICA_12G28260source=BGI China;type=FgeneSH;Coding geneHOM003216 ORTHO003107
X OSINDICA_12G28270source=BGI China;type=FgeneSH;Coding geneHOM019769 ORTHO070519
X OSINDICA_12G28280source=BGI China;type=FgeneSH;Coding geneHOM011395 ORTHO032716
X OSINDICA_12G28290source=BGI China;type=FgeneSH;Coding geneHOM007201 ORTHO070520
X OSINDICA_12G28300source=BGI China;type=FgeneSH;Coding geneHOM007201 ORTHO030220
X OSINDICA_12G28310source=BGI China;type=FgeneSH;Coding geneHOM027818 ORTHO070521
X OSINDICA_12G28320source=BGI China;type=FgeneSH;Coding geneHOM002960 ORTHO001259
X OSINDICA_12G28330source=BGI China;type=FgeneSH;Coding geneHOM007201 ORTHO030220
X OSINDICA_12G28340source=BGI China;type=FgeneSH;Coding geneHOM007201 ORTHO032715
X OSINDICA_12G28350source=BGI China;type=FgeneSH;Coding geneHOM007201 ORTHO029722
X OSINDICA_12G28360source=BGI China;type=FgeneSH;Coding geneHOM014365 ORTHO070522
X OSINDICA_12G28370source=BGI China;type=FgeneSH;Coding geneHOM011395 ORTHO070523
X OSINDICA_12G28380source=BGI China;type=FgeneSH;Coding geneHOM014195 ORTHO070524
X OSINDICA_12G28390source=BGI China;type=FgeneSH;Coding geneHOM000035 ORTHO211848
X OSINDICA_12G28400source=BGI China;type=FgeneSH;Coding geneHOM000035 ORTHO096273
X OSINDICA_12G28410source=BGI China;type=FgeneSH;Coding geneHOM000035 ORTHO023032
X OSINDICA_12G28420source=BGI China;type=FgeneSH;Coding geneHOM008836 ORTHO070525
X OSINDICA_12G28430source=BGI China;type=FgeneSH;Coding geneHOM001004 ORTHO006700
X OSINDICA_12G28440source=BGI China;type=FgeneSH;Coding geneHOM000013 ORTHO010019
X OSINDICA_12G28450source=BGI China;type=FgeneSH;Coding geneHOM001027 ORTHO008243
X OSINDICA_12G28460source=BGI China;type=FgeneSH;Coding geneHOM000882 ORTHO026810
X OSINDICA_12G28470source=BGI China;type=FgeneSH;Coding geneHOM000833 ORTHO015292
X OSINDICA_12G28480source=BGI China;type=FgeneSH;Coding geneHOM006109 ORTHO008911
X OSINDICA_12G28490source=BGI China;type=FgeneSH;Coding geneHOM000467 ORTHO001491
X OSINDICA_12G28500source=BGI China;type=FgeneSH;Coding geneHOM002046 ORTHO001767
X OSINDICA_12G28510source=BGI China;type=FgeneSH;Coding geneHOM000095 ORTHO007537
X OSINDICA_12G28520source=BGI China;type=FgeneSH;Coding geneHOM004702 ORTHO005659
X OSINDICA_12G28530source=BGI China;type=FgeneSH;Coding geneHOM004145 ORTHO007468
X OSINDICA_12G28540source=BGI China;type=FgeneSH;Coding geneHOM000546 ORTHO082788
V OSINDICA_12G28550source=BGI China;type=FgeneSH;Coding geneHOM000028 ORTHO002736
X OSINDICA_12G28560source=BGI;type=TE by repeatmask;Transposon
V OSINDICA_12G28570source=BGI China;type=FgeneSH;Coding geneHOM000075 ORTHO070526
X OSINDICA_12G28580source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28590source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28600source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28610source=BGI;type=TE by repeatmask;Transposon
V OSINDICA_12G28620source=BGI China;type=FgeneSH;Coding geneHOM009140 ORTHO023030
X OSINDICA_12G28630source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G28640source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G28650source=BGI China;type=FgeneSH;Coding genesingleton
V OSINDICA_12G28660source=BGI China;type=FgeneSH;Coding geneHOM009140 ORTHO070527
X OSINDICA_12G28670source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28680source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28690source=BGI China;type=FgeneSH;Coding geneHOM000689 ORTHO012886
X OSINDICA_12G28700source=BGI;type=TE by repeatmask;Transposon
V OSINDICA_12G28710source=BGI China;type=FgeneSH;Coding geneHOM000075 ORTHO070529
X OSINDICA_12G28720source=BGI China;type=FgeneSH;Coding geneHOM016405 ORTHO070530
V OSINDICA_12G28730source=BGI China;type=FgeneSH;Coding geneHOM009140 ORTHO070531
X OSINDICA_12G28740source=BGI China;type=FgeneSH;Coding geneHOM009523 ORTHO018974
X OSINDICA_12G28750source=BGI China;type=FgeneSH;Coding geneHOM008672 ORTHO030221
X OSINDICA_12G28760source=BGI China;type=FgeneSH;Coding geneHOM000681 ORTHO070532
X OSINDICA_12G28770source=BGI China;type=FgeneSH;Coding geneHOM000681 ORTHO017816
X OSINDICA_12G28780source=BGI China;type=FgeneSH;Coding geneHOM000904 ORTHO026809
X OSINDICA_12G28790source=BGI China;type=FgeneSH;Coding geneHOM029572 ORTHO070533
X OSINDICA_12G28800source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28810source=BGI China;type=FgeneSH;Coding geneHOM004756 ORTHO006026
X OSINDICA_12G28820source=BGI China;type=FgeneSH;Coding geneHOM012217 ORTHO023029
X OSINDICA_12G28830source=BGI China;type=FgeneSH;Coding geneHOM002043 ORTHO003504
X OSINDICA_12G28840source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G28850source=BGI China;type=FgeneSH;Coding geneHOM002043 ORTHO006895
X OSINDICA_12G28860source=BGI China;type=FgeneSH;Coding geneHOM000131 ORTHO011294
X OSINDICA_12G28870source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28880source=BGI China;type=FgeneSH;Coding geneHOM000131 ORTHO004786
X OSINDICA_12G28890source=BGI China;type=FgeneSH;Coding geneHOM021295 ORTHO070534
V OSINDICA_12G28900source=BGI China;type=FgeneSH;Coding geneHOM001120 ORTHO023028
X OSINDICA_12G28910source=BGI China;type=FgeneSH;Coding geneHOM020264 ORTHO070535
X OSINDICA_12G28920source=BGI China;type=FgeneSH;Coding geneHOM010050 ORTHO108006
V OSINDICA_12G28930source=BGI China;type=FgeneSH;Coding geneHOM027463 ORTHO070536
X OSINDICA_12G28940source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28950source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G28960source=BGI China;type=FgeneSH;Coding geneHOM012187 ORTHO070537
X OSINDICA_12G28970source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28980source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G28990source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29000source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29010source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29020source=BGI;type=TE by repeatmask;Transposon
V OSINDICA_12G29030source=BGI China;type=FgeneSH;Coding geneHOM019250 ORTHO070538
X OSINDICA_12G29040source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29050source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29060source=BGI China;type=FgeneSH;Coding geneHOM031339 ORTHO070539
V OSINDICA_12G29070source=BGI China;type=FgeneSH;Coding geneHOM015738 ORTHO070540
X OSINDICA_12G29080source=BGI China;type=FgeneSH;Coding geneHOM031530 ORTHO070541
X OSINDICA_12G29090source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29100source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29110source=BGI China;type=FgeneSH;Coding geneHOM000044 ORTHO005704
X OSINDICA_12G29120source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29130source=BGI China;type=FgeneSH;Coding geneHOM000014 ORTHO070542
X OSINDICA_12G29140source=BGI China;type=FgeneSH;Coding geneHOM025063 ORTHO070543
X OSINDICA_12G29150source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29160source=BGI China;type=FgeneSH;Coding geneHOM000922 ORTHO070544
X OSINDICA_12G29170source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G29180source=BGI China;type=FgeneSH;Coding geneHOM000922 ORTHO277618
X OSINDICA_12G29190source=BGI China;type=FgeneSH;Coding geneHOM015133 ORTHO070545
X OSINDICA_12G29200source=BGI China;type=FgeneSH;Coding geneHOM000725 ORTHO030222
X OSINDICA_12G29210source=BGI China;type=FgeneSH;Coding geneHOM000942 ORTHO000322
X OSINDICA_12G29220source=BGI China;type=FgeneSH;Coding geneHOM000651 ORTHO000366
X OSINDICA_12G29230source=BGI China;type=FgeneSH;Coding geneHOM006209 ORTHO004784
X OSINDICA_12G29240source=BGI China;type=FgeneSH;Coding geneHOM000841 ORTHO014781
X OSINDICA_12G29250source=BGI China;type=FgeneSH;Coding geneHOM001078 ORTHO023027
V OSINDICA_12G29260source=BGI China;type=FgeneSH;Coding geneHOM000310 ORTHO003456
X OSINDICA_12G29270source=BGI China;type=FgeneSH;Coding geneHOM001078 ORTHO016753
X OSINDICA_12G29280source=BGI China;type=FgeneSH;Coding geneHOM029149 ORTHO070546
X OSINDICA_12G29290source=BGI China;type=FgeneSH;Coding geneHOM000981 ORTHO004201
X OSINDICA_12G29300source=BGI China;type=FgeneSH;Coding geneHOM000027 ORTHO070547
X OSINDICA_12G29310source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29320source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29330source=BGI China;type=FgeneSH;Coding geneHOM000041 ORTHO070548
X OSINDICA_12G29340source=BGI China;type=FgeneSH;Coding geneHOM005241 ORTHO005520
X OSINDICA_12G29350source=BGI China;type=FgeneSH;Coding geneHOM009878 ORTHO026923
X OSINDICA_12G29360source=BGI China;type=FgeneSH;Coding geneHOM019869 ORTHO070549
X OSINDICA_12G29370source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G29380source=BGI China;type=FgeneSH;Coding geneHOM000506 ORTHO070550
X OSINDICA_12G29390source=BGI China;type=FgeneSH;Coding geneHOM023606 ORTHO070551
X OSINDICA_12G29400source=BGI China;type=FgeneSH;Coding geneHOM007390 ORTHO026922
X OSINDICA_12G29410source=BGI China;type=FgeneSH;Coding geneHOM001031 ORTHO013772
X OSINDICA_12G29420source=BGI China;type=FgeneSH;Coding geneHOM001594 ORTHO006584
X OSINDICA_12G29430source=BGI China;type=FgeneSH;Coding geneHOM002998 ORTHO001636
X OSINDICA_12G29440source=BGI China;type=FgeneSH;Coding geneHOM000041 ORTHO214862
X OSINDICA_12G29450source=BGI China;type=FgeneSH;Coding geneHOM000041 ORTHO265899
X OSINDICA_12G29460source=BGI China;type=FgeneSH;Coding geneHOM000041 ORTHO070552
X OSINDICA_12G29470source=BGI China;type=FgeneSH;Coding geneHOM004283 ORTHO070553
X OSINDICA_12G29480source=BGI China;type=FgeneSH;Coding geneHOM000026 ORTHO053958
X OSINDICA_12G29490source=BGI China;type=FgeneSH;Coding geneHOM000041 ORTHO193777
X OSINDICA_12G29500source=BGI China;type=FgeneSH;Coding geneHOM000623 ORTHO232066
X OSINDICA_12G29510source=BGI China;type=FgeneSH;Coding geneHOM000623 ORTHO039246
X OSINDICA_12G29520source=BGI China;type=FgeneSH;Coding geneHOM000623 ORTHO039246
X OSINDICA_12G29530source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29540source=BGI China;type=FgeneSH;Coding geneHOM000623 ORTHO114079
X OSINDICA_12G29550source=BGI China;type=FgeneSH;Coding geneHOM000623 ORTHO070554
X OSINDICA_12G29560source=BGI China;type=FgeneSH;Coding geneHOM001719 ORTHO070555
X OSINDICA_12G29570source=BGI China;type=FgeneSH;Coding geneHOM000041 ORTHO012763
X OSINDICA_12G29580source=BGI China;type=FgeneSH;Coding geneHOM002447 ORTHO004338
X OSINDICA_12G29590source=BGI China;type=FgeneSH;Coding geneHOM000041 ORTHO141026
X OSINDICA_12G29600source=BGI China;type=FgeneSH;Coding geneHOM002447 ORTHO184376
X OSINDICA_12G29610source=BGI China;type=FgeneSH;Coding geneHOM000041 ORTHO024158
X OSINDICA_12G29620source=BGI China;type=FgeneSH;Coding geneHOM000041 ORTHO012763
X OSINDICA_12G29630source=BGI China;type=FgeneSH;Coding geneHOM003098 ORTHO006726
X OSINDICA_12G29640source=BGI China;type=FgeneSH;Coding geneHOM003951 ORTHO171612
X OSINDICA_12G29650source=BGI China;type=FgeneSH;Coding geneHOM010605 ORTHO019558
V OSINDICA_12G29660source=BGI China;type=FgeneSH;Coding geneHOM000075 ORTHO025203
X OSINDICA_12G29670source=BGI China;type=FgeneSH;Coding geneHOM003098 ORTHO117193
X OSINDICA_12G29680source=BGI China;type=FgeneSH;Coding geneHOM023971 ORTHO070556
X OSINDICA_12G29690source=BGI China;type=FgeneSH;Coding geneHOM003951 ORTHO002463
X OSINDICA_12G29700source=BGI China;type=FgeneSH;Coding geneHOM001324 ORTHO070557
X OSINDICA_12G29710source=BGI China;type=FgeneSH;Coding geneHOM025762 ORTHO062383
X OSINDICA_12G29720source=BGI China;type=FgeneSH;Coding geneHOM010605 ORTHO019558
V OSINDICA_12G29730source=BGI China;type=FgeneSH;Coding geneHOM000075 ORTHO025203
X OSINDICA_12G29740source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G29750source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29760source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29770source=BGI China;type=FgeneSH;Coding geneHOM013837 ORTHO190605
X OSINDICA_12G29780source=BGI China;type=FgeneSH;Coding geneHOM005051 ORTHO071109
V OSINDICA_12G29790source=BGI China;type=FgeneSH;Coding geneHOM000018 ORTHO176740
X OSINDICA_12G29800source=BGI China;type=FgeneSH;Coding geneHOM000510 ORTHO005320
X OSINDICA_12G29810source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G29820source=BGI China;type=FgeneSH;Coding geneHOM005051 ORTHO004827
V OSINDICA_12G29830source=BGI China;type=FgeneSH;Coding geneHOM000018 ORTHO023025
X OSINDICA_12G29840source=BGI China;type=FgeneSH;Coding geneHOM000510 ORTHO143867
X OSINDICA_12G29850source=BGI China;type=FgeneSH;Coding geneHOM000073 ORTHO019557
X OSINDICA_12G29860source=BGI China;type=FgeneSH;Coding geneHOM000036 ORTHO003418
X OSINDICA_12G29870source=BGI China;type=FgeneSH;Coding geneHOM000073 ORTHO099034
X OSINDICA_12G29880source=BGI China;type=FgeneSH;Coding geneHOM000056 ORTHO071076
X OSINDICA_12G29890source=BGI China;type=FgeneSH;Coding geneHOM000060 ORTHO025237
X OSINDICA_12G29900source=BGI China;type=FgeneSH;Coding geneHOM002377 ORTHO007230
X OSINDICA_12G29910source=BGI China;type=FgeneSH;Coding geneHOM027349 ORTHO070559
X OSINDICA_12G29920source=BGI China;type=FgeneSH;Coding geneHOM000127 ORTHO038925
X OSINDICA_12G29930source=BGI China;type=FgeneSH;Coding geneHOM009895 ORTHO070920
X OSINDICA_12G29940source=BGI China;type=FgeneSH;Coding genesingleton
X OSINDICA_12G29950source=BGI China;type=FgeneSH;Coding geneHOM001342 ORTHO009330
X OSINDICA_12G29960source=BGI China;type=FgeneSH;Coding geneHOM024373 ORTHO070560
X OSINDICA_12G29970source=BGI China;type=FgeneSH;Coding geneHOM004858 ORTHO023024
X OSINDICA_12G29980source=BGI China;type=FgeneSH;Coding geneHOM002015 ORTHO008491
X OSINDICA_12G29990source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G30000source=BGI China;type=FgeneSH;Coding geneHOM001296 ORTHO070561
X OSINDICA_12G30010source=BGI China;type=FgeneSH;Coding geneHOM029666 ORTHO070562
V OSINDICA_12G30020source=BGI China;type=FgeneSH;Coding geneHOM000805 ORTHO000117
X OSINDICA_12G30030source=BGI;type=TE by repeatmask;Transposon
X OSINDICA_12G30040source=BGI China;type=FgeneSH;Coding geneHOM031054 ORTHO071374
V OSINDICA_12G30050source=BGI China;type=FgeneSH;Coding geneHOM000553 ORTHO016751
X OSINDICA_12G30060source=BGI China;type=FgeneSH;Coding geneHOM000278 ORTHO000720
V OSINDICA_12G30070source=BGI China;type=FgeneSH;Coding geneHOM000365 ORTHO004668
V OSINDICA_12G30080source=BGI China;type=FgeneSH;Coding geneHOM000092 ORTHO000381
X OSINDICA_12G30090source=BGI China;type=FgeneSH;Coding geneHOM005428 ORTHO008947
X OSINDICA_12G30100source=BGI China;type=FgeneSH;Coding geneHOM001402 ORTHO023023
V OSINDICA_12G30110source=BGI China;type=FgeneSH;Coding geneHOM000105 ORTHO000238