Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_osa_5
Cluster type
GO
Species
Oryza sativa ssp. japonica
Chromosome
4
E-value
2.04638e-39
GO label
GO:0032991
GO description
macromolecular complex
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM00021535626125
HOM00046221020124
HOM00048220217523
HOM00057517514223
HOM00061416517324
HOM00061916413223
HOM00073914617423
HOM00077014115325
HOM00077514010123
HOM0009611179123
HOM00102910917423
HOM00108110511123
HOM001724708220
HOM002742474219
HOM005581265119

Gene information

In cluster Gene id Description Gene type Gene family
V OS04G16712chloroplast 30S ribosomal protein S7, putativeCoding geneHOM000482 ORTHO000656
V OS04G16714chloroplast 30S ribosomal protein S12, putativeCoding geneHOM001029 ORTHO016409
X OS04G16716hypothetical proteinCoding genesingleton
X OS04G16718hypothetical proteinCoding genesingleton
X OS04G16722uncharacterized protein ycf68, putative, expressedCoding geneHOM008876 ORTHO017302
X OS04G16724hypothetical proteinCoding genesingleton
X OS04G16726expressed proteinCoding geneHOM009567 ORTHO025105
V OS04G16728chloroplast 30S ribosomal protein S15, putativeCoding geneHOM000775 ORTHO029775
X OS04G16732NADPH%2Ddependent oxidoreductase, putative, expressedCoding geneHOM000491 ORTHO003254
X OS04G16734maturase K, putativeCoding geneHOM000961 ORTHO007737
X OS04G16736photosystem I assembly protein ycf3, putativeCoding geneHOM002384 ORTHO006334
V OS04G16738chloroplast 30S ribosomal protein S4, putative, expressedCoding geneHOM002742 ORTHO001806
X OS04G16742NADPH%2Ddependent oxidoreductase, putativeCoding geneHOM000482 ORTHO001792
V OS04G16744chloroplast 30S ribosomal protein S7, putativeCoding geneHOM000482 ORTHO000656
V OS04G16746chloroplast 30S ribosomal protein S12, putativeCoding geneHOM001029 ORTHO016409
V OS04G16748ATP synthase B chain, putativeCoding geneHOM005581 ORTHO007020
V OS04G16740ATP synthase subunit alpha, putative, expressedCoding geneHOM000215 ORTHO004312
V OS04G16745chloroplast 30S ribosomal protein S14, putativeCoding geneHOM000575 ORTHO005606
V OS04G16760photosystem I P700 chlorophyll a apoprotein A1, putativeCoding geneHOM000575 ORTHO002664
X OS04G16762photosystem I assembly protein ycf3, putativeCoding geneHOM002384 ORTHO081345
V OS04G16764chloroplast 30S ribosomal protein S4, putative, expressedCoding geneHOM002742 ORTHO001806
V OS04G16770photosynthetic reaction center protein, putative, expressedCoding geneHOM000961 ORTHO001130
V OS04G16772chloroplast 30S ribosomal protein S19, putativeCoding geneHOM000739 ORTHO000923
V OS04G16775conserved hypothetical proteinCoding geneHOM000770 ORTHO020744
V OS04G16776chloroplast 50S ribosomal protein L2, putativeCoding geneHOM000770 ORTHO000561
X OS04G16778uncharacterized protein ycf72, putativeCoding geneHOM004786 ORTHO009010
V OS04G16782chloroplast 50S ribosomal protein L23, putativeCoding geneHOM001724 ORTHO000441
X OS04G16784hypothetical proteinCoding genesingleton
X OS04G16786hypothetical proteinCoding genesingleton
X OS04G16788hypothetical proteinCoding genesingleton
X OS04G16792uncharacterized protein ycf76, putativeCoding geneHOM015999 ORTHO038563
X OS04G16794hypothetical proteinCoding geneHOM015970 ORTHO038564
V OS04G16796hypothetical proteinCoding genesingleton
V OS04G16798chloroplast 30S ribosomal protein S7, putative, expressedCoding geneHOM000482 ORTHO000656
X OS04G16802hypothetical proteinCoding genesingleton
X OS04G16804uncharacterized protein ycf73, putative, expressedCoding geneHOM007349 ORTHO015695
X OS04G16806hypothetical proteinCoding genesingleton
X OS04G16808hypothetical proteinCoding genesingleton
V OS04G16812chloroplast 50S ribosomal protein L23, putativeCoding geneHOM001724 ORTHO000441
V OS04G16814chloroplast 50S ribosomal protein L2, putativeCoding geneHOM000770 ORTHO000561
X OS04G16816uncharacterized protein ycf72, putativeCoding geneHOM004786 ORTHO009010
V OS04G16818chloroplast 30S ribosomal protein S19, putativeCoding geneHOM000739 ORTHO000923
V OS04G16822chloroplast 50S ribosomal protein L22, putativeCoding geneHOM000739 ORTHO004308
V OS04G16824chloroplast 30S ribosomal protein S3, putativeCoding geneHOM000739 ORTHO001954
V OS04G16826chloroplast 50S ribosomal protein L16, putativeCoding geneHOM000614 ORTHO001799
V OS04G16828chloroplast 50S ribosomal protein L14, putativeCoding geneHOM000614 ORTHO002148
V OS04G16832chloroplast 30S ribosomal protein S8, putativeCoding geneHOM000614 ORTHO003780
X OS04G16834translation initiation factor IF%2D1, chloroplast, putativeCoding geneHOM004268 ORTHO002804
V OS04G16836hypothetical proteinCoding genesingleton
V OS04G16838chloroplast 30S ribosomal protein S11, putativeCoding geneHOM001081 ORTHO014576
X OS04G16842DNA%2Ddirected RNA polymerase subunit alpha, putativeCoding geneHOM001081 ORTHO001805
X OS04G16844cytochrome b6%2Df complex subunit 4, putativeCoding geneHOM000462 ORTHO002965
X OS04G16846cytochrome b6, putativeCoding geneHOM000462 ORTHO004309
V OS04G16848photosystem II reaction center protein H, putativeCoding geneHOM000462 ORTHO002966
V OS04G16852hypothetical proteinCoding genesingleton
X OS04G16854NADPH%2Ddependent oxidoreductase, putativeCoding geneHOM000482 ORTHO001792
V OS04G16856chloroplast 30S ribosomal protein S7, putativeCoding geneHOM000482 ORTHO000656
V OS04G16858chloroplast 30S ribosomal protein S12, putativeCoding geneHOM001029 ORTHO016409
X OS04G16862hypothetical proteinCoding genesingleton
X OS04G16864hypothetical proteinCoding genesingleton
X OS04G16866photosystem II reaction center protein K precursor, putative, expressedCoding geneHOM002716 ORTHO005608
V OS04G16868hypothetical proteinCoding genesingleton
V OS04G16872photosystem II D2 protein, putativeCoding geneHOM000619 ORTHO002969
V OS04G16874photosystem II 44 kDa reaction center protein, putative, expressedCoding geneHOM000619 ORTHO002407
X OS04G16876photosystem II reaction center protein Z, putativeCoding geneHOM000619 ORTHO004311
X OS04G16878uncharacterized protein ycf70, putativeCoding geneHOM012162 ORTHO025061
X OS04G16882conserved hypothetical proteinCoding geneHOM008363 ORTHO017303
X OS04G16884hypothetical proteinCoding genesingleton
X OS04G16820DNA%2Ddirected RNA polymerase subunit beta, putative, expressedCoding geneHOM000550 ORTHO001338
X OS04G16830DNA%2Ddirected RNA polymerase subunit beta, putativeCoding geneHOM001193 ORTHO032934
V OS04G16886chloroplast 30S ribosomal protein S7, putativeCoding geneHOM000482 ORTHO000656
V OS04G16888chloroplast 30S ribosomal protein S12, putativeCoding geneHOM001029 ORTHO016409