Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_osa_4
Cluster type
GO
Species
Oryza sativa ssp. japonica
Chromosome
10
E-value
3.55818e-41
GO label
GO:0032991
GO description
macromolecular complex
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM00021136030225
HOM00021535626525
HOM00039523413125
HOM00046221020224
HOM00048220217123
HOM00057517514323
HOM00061416517224
HOM00061916413123
HOM00073914617223
HOM00077014115125
HOM0009611179123
HOM00102910917123
HOM00108110511123
HOM001436825122
HOM001724708120
HOM001874665125
HOM004406324119
HOM005581265119

Gene information

In cluster Gene id Description Gene type Gene family
V OS10G21192photosystem Q, putativeCoding geneHOM000961 ORTHO001130
X OS10G21194maturase K, putativeCoding geneHOM000961 ORTHO007737
V OS10G21196chloroplast 30S ribosomal protein S16, putativeCoding geneHOM000395 ORTHO006335
X OS10G21198photosystem II reaction center protein K precursor, putativeCoding geneHOM002716 ORTHO238278
V OS10G21202hypothetical proteinCoding genesingleton
X OS10G21210hypothetical proteinCoding genesingleton
V OS10G21212photosystem II 44 kDa reaction center protein, putativeCoding geneHOM000619 ORTHO002407
X OS10G21214photosystem II reaction center protein Z, putativeCoding geneHOM000619 ORTHO004311
X OS10G21216uncharacterized protein ycf70, putativeCoding geneHOM012162 ORTHO025061
X OS10G21218conserved hypothetical proteinCoding geneHOM008363 ORTHO017303
X OS10G21222expressed proteinCoding genesingleton
X OS10G21224hypothetical proteinCoding genesingleton
X OS10G21226hypothetical proteinCoding genesingleton
X OS10G21228hypothetical proteinCoding genesingleton
X OS10G21232hypothetical proteinCoding genesingleton
V OS10G21234chloroplast 30S ribosomal protein S2, putativeCoding geneHOM000215 ORTHO002665
V OS10G21236chloroplast ATP synthase a chain precursor, putativeCoding geneHOM000215 ORTHO005607
V OS10G21230ATP synthase C chain, putative, expressedCoding geneHOM000215 ORTHO001974
V OS10G21238ATP synthase B chain, putativeCoding geneHOM005581 ORTHO007020
V OS10G21240ATP synthase, putativeCoding geneHOM000215 ORTHO004312
V OS10G21244chloroplast 30S ribosomal protein S14, putativeCoding geneHOM000575 ORTHO005606
V OS10G21248photosystem I P700 chlorophyll a apoprotein A2, putativeCoding geneHOM000575 ORTHO001434
V OS10G21250photosystem I P700 chlorophyll a apoprotein A1, putativeCoding geneHOM000575 ORTHO002664
X OS10G21254photosystem I assembly protein ycf3, putativeCoding geneHOM002384 ORTHO006334
X OS10G21258NADPH%2Ddependent oxidoreductase, putativeCoding geneHOM000211 ORTHO002150
X OS10G21260hypothetical proteinCoding genesingleton
X OS10G21262hypothetical proteinCoding genesingleton
V OS10G21264ATP synthase epsilon chain, putativeCoding geneHOM000211 ORTHO007549
V OS10G21266ATP synthase subunit beta, putativeCoding geneHOM000211 ORTHO001337
X OS10G21268ribulose bisphosphate carboxylase large chain precursor, putative, expressedCoding geneHOM000775 ORTHO001077
X OS10G21272expressed proteinCoding geneHOM017448 ORTHO038768
X OS10G21274conserved hypothetical proteinCoding geneHOM013174 ORTHO021138
V OS10G21276hypothetical proteinCoding genesingleton
X OS10G21278hypothetical proteinCoding genesingleton
X OS10G21282hypothetical proteinCoding genesingleton
X OS10G21290apocytochrome f precursor, putativeCoding geneHOM001150 ORTHO002149
V OS10G21292hypothetical proteinCoding genesingleton
V OS10G21294hypothetical proteinCoding genesingleton
V OS10G21296hypothetical proteinCoding genesingleton
V OS10G21298cytochrome b559 subunit alpha, putativeCoding geneHOM001436 ORTHO001236
X OS10G21302hypothetical proteinCoding genesingleton
X OS10G21304hypothetical proteinCoding genesingleton
V OS10G21306hypothetical proteinCoding genesingleton
V OS10G21308chloroplast 50S ribosomal protein L33, putativeCoding geneHOM000215 ORTHO002968
V OS10G21312chloroplast 30S ribosomal protein S18, putativeCoding geneHOM004406 ORTHO004310
V OS10G21314chloroplast 50S ribosomal protein L20, putativeCoding geneHOM001874 ORTHO009220
X OS10G21300ATP%2Ddependent Clp protease proteolytic subunit, putativeCoding geneHOM000202 ORTHO222303
V OS10G21310photosystem II P680 chlorophyll A apoprotein, putative, expressedCoding geneHOM000462 ORTHO002967
V OS10G21316hypothetical proteinCoding genesingleton
V OS10G21318hypothetical proteinCoding genesingleton
V OS10G21322photosystem II reaction center protein H, putativeCoding geneHOM000462 ORTHO219842
X OS10G21324cytochrome b6, putativeCoding geneHOM000462 ORTHO004309
X OS10G21326cytochrome b6%2Df complex subunit 4, putativeCoding geneHOM000462 ORTHO002965
X OS10G21328DNA%2Ddirected RNA polymerase subunit alpha, putativeCoding geneHOM001081 ORTHO001805
V OS10G21332chloroplast 30S ribosomal protein S11, putativeCoding geneHOM001081 ORTHO014576
V OS10G21334hypothetical proteinCoding genesingleton
X OS10G21336hypothetical proteinCoding genesingleton
V OS10G21338hypothetical proteinCoding genesingleton
V OS10G21342chloroplast 50S ribosomal protein L14, putativeCoding geneHOM000614 ORTHO002148
V OS10G21344chloroplast 50S ribosomal protein L16, putativeCoding geneHOM000614 ORTHO001799
V OS10G21346chloroplast 30S ribosomal protein S3, putative, expressedCoding geneHOM000739 ORTHO001954
X OS10G21348hypothetical proteinCoding genesingleton
V OS10G21352chloroplast 30S ribosomal protein S19, putative, expressedCoding geneHOM000739 ORTHO000923
V OS10G21354chloroplast 50S ribosomal protein L2, putativeCoding geneHOM000770 ORTHO000561
X OS10G21356uncharacterized protein ycf72, putativeCoding geneHOM004786 ORTHO009010
V OS10G21358chloroplast 50S ribosomal protein L23, putativeCoding geneHOM001724 ORTHO000441
X OS10G21362hypothetical proteinCoding genesingleton
X OS10G21364hypothetical proteinCoding genesingleton
X OS10G21366uncharacterized protein ycf73, putativeCoding geneHOM007349 ORTHO015695
X OS10G21368hypothetical proteinCoding genesingleton
V OS10G21372chloroplast 30S ribosomal protein S7, putativeCoding geneHOM000482 ORTHO000656
V OS10G21374chloroplast 30S ribosomal protein S12, putativeCoding geneHOM001029 ORTHO016409