Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_osa_107
Cluster type
GO
Species
Oryza sativa ssp. japonica
Chromosome
3
E-value
0.0000612641
GO label
GO:0005488
GO description
binding
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM0000017142293325
HOM0000034618203125
HOM0000151969158220
HOM000036135953125
HOM000038132272119
HOM0000411279116124
HOM000051109474123
HOM000057102044125
HOM00006989955124
HOM00007287740124
HOM00008281436125
HOM00009967230125
HOM00010364538125
HOM00011957029125
HOM00013852627525
HOM00014151520125
HOM00015247219123
HOM00017941418125
HOM00039223512225
HOM00042122211125
HOM0004432175120
HOM00046021111225
HOM0005991687125
HOM0009831146121
HOM002015612119
HOM003111422125
HOM003321392124
HOM003458382116
HOM003565372123
HOM003687362120
HOM003837351123
HOM003949342124
HOM004108343117
HOM004116331124
HOM00448131114
HOM004742301121
HOM004879291119
HOM005662251123
HOM006215221121
HOM006545201114
HOM0087038522
HOM0097866214

Gene information

In cluster Gene id Description Gene type Gene family
V OS03G60380cinnamoyl CoA reductase, putative, expressedCoding geneHOM000069 ORTHO006794
V OS03G60390PHD finger protein, putative, expressedCoding geneHOM000421 ORTHO021319
X OS03G6040040S ribosomal protein S23, putative, expressedCoding geneHOM001386 ORTHO000960
X OS03G60410hypothetical proteinCoding geneHOM012600 ORTHO063827
X OS03G60419expressed proteinCoding genesingleton
V OS03G60430AP2 domain containing protein, expressedCoding geneHOM000119 ORTHO021318
X OS03G60440hypothetical proteinCoding geneHOM020143 ORTHO063828
X OS03G60449hypothetical proteinCoding geneHOM000735 ORTHO063829
V OS03G60460aminopeptidase, putative, expressedCoding geneHOM004742 ORTHO006620
X OS03G60470glycine%2Drich protein A3, putative, expressedCoding geneHOM016399 ORTHO038526
V OS03G60480heavy metal%2Dassociated domain containing protein, expressedCoding geneHOM000983 ORTHO005083
X OS03G60500conserved hypothetical proteinCoding geneHOM007562 ORTHO131566
X OS03G60509expressed proteinCoding geneHOM001962 ORTHO007275
X OS03G60520expressed proteinCoding geneHOM009886 ORTHO018931
X OS03G60524transposon protein, putative, unclassifiedTransposon
X OS03G60530ras%2Drelated protein, putative, expressedCoding geneHOM000032 ORTHO126861
X OS03G60540ZOS3%2D20 %2D C2H2 zinc finger proteinCoding geneHOM000155 ORTHO021317
V OS03G60550ThiF family domain containing protein, putative, expressedCoding geneHOM003837 ORTHO002898
X OS03G60560ZOS3%2D21 %2D C2H2 zinc finger protein, expressedCoding geneHOM000155 ORTHO018930
X OS03G60570ZOS3%2D22 %2D C2H2 zinc finger protein, expressedCoding geneHOM000155 ORTHO029753
V OS03G60580actin%2Ddepolymerizing factor, putative, expressedCoding geneHOM000392 ORTHO026065
V OS03G60590actin%2Ddepolymerizing factor, putative, expressedCoding geneHOM000392 ORTHO026064
V OS03G60600zinc knuckle domain containing protein, expressedCoding geneHOM003458 ORTHO026063
X OS03G60610SEC14 cytosolic factor family protein, putative, expressedCoding geneHOM004384 ORTHO004485
X OS03G60620DnaK family protein, putative, expressedCoding geneHOM000083 ORTHO000015
V OS03G60630dof zinc finger domain containing protein, putative, expressedCoding geneHOM000099 ORTHO007917
X OS03G60639expressed proteinCoding genesingleton
X OS03G60650protein phosphatase 2C, putative, expressedCoding geneHOM000712 ORTHO001402
X OS03G60660hypothetical proteinCoding geneHOM028828 ORTHO063830
X OS03G60670retrotransposon protein, putative, unclassifiedTransposon
X OS03G60690pentatricopeptide, putative, expressedCoding geneHOM000001 ORTHO012705
X OS03G60700dolichyl%2Dphosphate beta%2Dglycosyltransferase, putative, expressedCoding geneHOM004570 ORTHO005092
X OS03G60710protein kinase domain containing protein, expressedCoding geneHOM000004 ORTHO007628
X OS03G60720expansin precursor, putative, expressedCoding geneHOM000065 ORTHO002732
X OS03G60730transposon protein, putative, unclassified, expressedTransposon
V OS03G60740expressed proteinCoding geneHOM003687 ORTHO003894
V OS03G60750ribosomal RNA large subunit methyltransferase J, putative, expressedCoding geneHOM006215 ORTHO008033
X OS03G60760hypothetical proteinCoding geneHOM003718 ORTHO038527
V OS03G60780armadillo%2Fbeta%2Dcatenin%2Dlike repeat containing protein, expressedCoding geneHOM003111 ORTHO001821
V OS03G60790heat shock protein DnaJ, putative, expressedCoding geneHOM009786 ORTHO004133
X OS03G60800transposon protein, putative, unclassified, expressedTransposon
V OS03G60810lectin%2Dlike receptor kinase, putative, expressedCoding geneHOM000041 ORTHO017575
X OS03G60820transporter, major facilitator superfamily domain containing protein, expressedCoding geneHOM000040 ORTHO005382
X OS03G60830transposon protein, putative, unclassifiedTransposon
X OS03G60840BBTI13 %2D Bowman%2DBirk type bran trypsin inhibitor precursor, expressedCoding geneHOM006127 ORTHO018929
X OS03G60850peptide transporter PTR2, putative, expressedCoding geneHOM000031 ORTHO001095
X OS03G60870ras%2Drelated protein, putative, expressedCoding geneHOM000032 ORTHO000345
X OS03G60880nucleobase%2Dascorbate transporter, putative, expressedCoding geneHOM000282 ORTHO000209
X OS03G60890calmodulin binding protein, putative, expressedCoding geneHOM000417 ORTHO063831
X OS03G60900expressed proteinCoding geneHOM003112 ORTHO034220
V OS03G60910PPR repeat domain containing protein, putative, expressedCoding geneHOM000003 ORTHO009248
V OS03G60920Methyltransferase small domain containing protein, expressedCoding geneHOM000001 ORTHO004995
V OS03G60930RNA recognition motif containing protein, putativeCoding geneHOM003321 ORTHO003439
X OS03G60939dolichyl%2Dphosphate beta%2Dglycosyltransferase, putative, expressedCoding geneHOM004569 ORTHO003733
X OS03G60950expressed proteinCoding geneHOM002793 ORTHO015225
X OS03G60960cytokinin%2DN%2Dglucosyltransferase 1, putative, expressedCoding geneHOM000023 ORTHO002769
X OS03G60976conserved hypothetical proteinCoding geneHOM003719 ORTHO038528
X OS03G60992conserved hypothetical proteinCoding geneHOM003719 ORTHO038528
V OS03G61010protein kinase family protein, putative, expressedCoding geneHOM000443 ORTHO000066
V OS03G61019mitochondrial import inner membrane translocase subunit Tim, putative, expressedCoding geneHOM003565 ORTHO003884
X OS03G61030transcription termination factor nusG family protein, expressedCoding geneHOM006093 ORTHO009276
X OS03G61040GIL1, putative, expressedCoding geneHOM000582 ORTHO009674
X OS03G61050FG%2DGAP repeat%2Dcontaining protein, putative, expressedCoding geneHOM003622 ORTHO002434
X OS03G61060protein kinase domain containing protein, expressedCoding geneHOM000017 ORTHO021315
X OS03G61070expressed proteinCoding geneHOM021331 ORTHO063832
X OS03G61080expressed proteinCoding geneHOM008793 ORTHO017827
X OS03G61090expressed proteinCoding geneHOM011602 ORTHO029754
X OS03G61100GDP%2Dmannose transporter, putativeCoding geneHOM001499 ORTHO002180
V OS03G61110RNA%2Dbinding motif protein, putative, expressedCoding geneHOM006545 ORTHO005835
X OS03G61120anthranilate synthase component I%2D1, chloroplast precursor, putative, expressedCoding geneHOM001117 ORTHO000676
X OS03G61130phosphoesterase family protein, putative, expressedCoding geneHOM001075 ORTHO009126
X OS03G61140expressed proteinCoding geneHOM006119 ORTHO007300
X OS03G61150expressed proteinCoding genesingleton
X OS03G61160expressed proteinCoding geneHOM015274 ORTHO029755
V OS03G61170retrotransposon protein, putative, unclassifiedTransposon
V OS03G61180retrotransposon protein, putative, unclassifiedTransposon
V OS03G61190retrotransposon protein, putative, unclassifiedTransposon
X OS03G61200expressed proteinCoding geneHOM000814 ORTHO008769
X OS03G61210domain of unknown function domain containing protein, expressedCoding geneHOM000637 ORTHO001678
V OS03G61220DEAD%2Dbox ATP%2Ddependent RNA helicase 3, putative, expressedCoding geneHOM000036 ORTHO002798
X OS03G61230hypothetical proteinCoding geneHOM028399 ORTHO063833
X OS03G61240expressed proteinCoding geneHOM014439 ORTHO026062
V OS03G61249RD26, putativeCoding geneHOM008703 ORTHO038529
X OS03G61260ribosomal L18p%2FL5e family protein, putative, expressedCoding geneHOM004149 ORTHO004274
V OS03G61270OsMan04 %2D Endo%2DBeta%2DMannanase, expressedCoding geneHOM000001 ORTHO063834
V OS03G61280OsMan05 %2D Endo%2DBeta%2DMannanase, expressedCoding geneHOM000001 ORTHO021314
X OS03G61290ATCHX, putative, expressedCoding geneHOM000133 ORTHO000084
V OS03G61310receptor%2Dlike protein kinase, putative, expressedCoding geneHOM000015 ORTHO000574
V OS03G61319RD26, putativeCoding geneHOM008703 ORTHO038529
X OS03G61330fumarylacetoacetase, putative, expressedCoding geneHOM002920 ORTHO005328
X OS03G61340hydrolase, alpha%2Fbeta fold family domain containing protein, expressedCoding geneHOM000361 ORTHO016642
X OS03G61360hydrolase, alpha%2Fbeta fold family domain containing protein, expressedCoding geneHOM000361 ORTHO022975
X OS03G61370retrotransposon protein, putative, unclassifiedTransposon
X OS03G61380retrotransposon protein, putative, unclassifiedTransposon
X OS03G61390retrotransposon protein, putative, unclassifiedTransposon
X OS03G61400retrotransposon protein, putative, unclassifiedTransposon
X OS03G61410expressed proteinCoding geneHOM011559 ORTHO021313
X OS03G61419hypothetical proteinCoding genesingleton
X OS03G61430uncharacterized Cys%2Drich domain containing protein, putativeCoding geneHOM000387 ORTHO104051
X OS03G61440uncharacterized Cys%2Drich domain containing protein, putativeCoding geneHOM000387 ORTHO063835
X OS03G61450transposon protein, putative, unclassifiedTransposon
X OS03G61460hypothetical proteinCoding geneHOM002556 ORTHO013755
X OS03G61470uncharacterized Cys%2Drich domain containing protein, putative, expressedCoding geneHOM000387 ORTHO028113
X OS03G61480uncharacterized Cys%2Drich domain containing protein, putativeCoding geneHOM000387 ORTHO063836
X OS03G61490expressed proteinCoding genesingleton
X OS03G61500uncharacterized Cys%2Drich domain containing protein, putativeCoding geneHOM000387 ORTHO063837
X OS03G61510pectinesterase inhibitor domain containing protein, expressedCoding geneHOM007270 ORTHO021312
X OS03G61530invertase%2Fpectin methylesterase inhibitor family protein, putative, expressedCoding geneHOM012794 ORTHO029756
X OS03G61540lipase class 3 family protein, putative, expressedCoding geneHOM001002 ORTHO021311
V OS03G61550heat shock protein DnaJ, putative, expressedCoding geneHOM000138 ORTHO005444
V OS03G61560expressed proteinCoding geneHOM004116 ORTHO003409
X OS03G61570expressed proteinCoding genesingleton
X OS03G61580expressed proteinCoding geneHOM000665 ORTHO003186
X OS03G61590expressed proteinCoding geneHOM000519 ORTHO063838
X OS03G61600phosphoribosylformylglycinamidine synthase, putative, expressedCoding geneHOM002989 ORTHO003946
X OS03G61610hypothetical proteinCoding genesingleton
X OS03G61620expressed proteinCoding geneHOM002325 ORTHO018927
X OS03G61630WD domain, G%2Dbeta repeat domain containing protein, expressedCoding geneHOM002112 ORTHO032031
V OS03G61640ZOS3%2D23 %2D C2H2 zinc finger protein, expressedCoding geneHOM005662 ORTHO005662
V OS03G61650hypothetical proteinCoding geneHOM004481 ORTHO063839
X OS03G61660retrotransposon protein, putative, unclassifiedTransposon
X OS03G61670calreticulin precursor, putative, expressedCoding geneHOM000409 ORTHO063840
X OS03G61680huntingtin%2Dinteracting protein HYPK, putative, expressedCoding geneHOM005625 ORTHO009269
X OS03G61690protein phosphatase 2C, putative, expressedCoding geneHOM000435 ORTHO009297
X OS03G61700expressed proteinCoding geneHOM003953 ORTHO008538
X OS03G61710GHMP kinases ATP%2Dbinding protein, putative, expressedCoding geneHOM004127 ORTHO003379
X OS03G61720glycerol%2D3%2Dphosphate acyltransferase, putative, expressedCoding geneHOM000384 ORTHO003696
V OS03G61730heat shock protein DnaJ, putative, expressedCoding geneHOM002015 ORTHO009718
V OS03G61740sex determination protein tasselseed%2D2, putative, expressedCoding geneHOM000051 ORTHO009406
X OS03G61750expressed proteinCoding geneHOM005586 ORTHO005948
V OS03G61760OsSPL6 %2D SBP%2Dbox gene family member, expressedCoding geneHOM000152 ORTHO000953
X OS03G61770hypothetical proteinCoding geneHOM029897 ORTHO063841
X OS03G61780glucan endo%2D1,3%2Dbeta%2Dglucosidase%2Drelated, putative, expressedCoding geneHOM000021 ORTHO021310
X OS03G61790RNA 3%2Dterminal phosphate cyclase, putative, expressedCoding geneHOM002592 ORTHO005246
X OS03G61800polygalacturonase, putative, expressedCoding geneHOM000297 ORTHO001866
X OS03G61810tRNA%2Dspecific adenosine deaminase, putative, expressedCoding geneHOM002167 ORTHO005256
V OS03G61820FEN1B %2D Putative flap endonuclease protein, expressedCoding geneHOM003949 ORTHO002533
X OS03G61829haloacid dehalogenase%2Dlike hydrolase family protein, putative, expressedCoding geneHOM000866 ORTHO005403
X OS03G61840hypothetical proteinCoding geneHOM010371 ORTHO038530
X OS03G61850transposon protein, putative, unclassifiedTransposon
X OS03G61860hypothetical proteinCoding geneHOM007096 ORTHO128737
X OS03G61870transposon protein, putative, Mariner sub%2DclassTransposon
X OS03G61890chloroplast protein import component Toc159, putative, expressedCoding geneHOM000636 ORTHO018925
X OS03G61900hypothetical proteinCoding geneHOM011722 ORTHO025098
X OS03G61910retrotransposon protein, putative, unclassified, expressedTransposon
X OS03G61920electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressedCoding geneHOM005141 ORTHO007709
V OS03G61930ACBP4, putative, expressedCoding geneHOM000141 ORTHO002157
X OS03G61940small heat shock protein, chloroplast precursor, putativeCoding geneHOM020986 ORTHO063842
V OS03G61950kelch motif family protein, putative, expressedCoding geneHOM004879 ORTHO006494
V OS03G619602Fe%2D2S iron%2Dsulfur cluster binding domain containing protein, expressedCoding geneHOM000599 ORTHO002469
V OS03G61970actin, putative, expressedCoding geneHOM000179 ORTHO000050
V OS03G61980cytochrome P450, putative, expressedCoding geneHOM000072 ORTHO012704
V OS03G61990glycine%2Drich RNA%2Dbinding protein 7, putative, expressedCoding geneHOM000057 ORTHO007955
X OS03G62000retrotransposon protein, putative, unclassifiedTransposon
X OS03G62010harpin%2Dinduced protein 1 domain containing protein, expressedCoding geneHOM004019 ORTHO021309
X OS03G62020harpin%2Dinduced protein 1 domain containing protein, expressedCoding geneHOM004019 ORTHO029757
X OS03G62030expressed proteinCoding geneHOM000018 ORTHO038531
X OS03G62040retrotransposon protein, putative, unclassified, expressedTransposon
V OS03G62050conserved hypothetical proteinCoding geneHOM000038 ORTHO063843
V OS03G62060hydrolase, putative, expressedCoding geneHOM000460 ORTHO063844
V OS03G62070hydrolase, putative, expressedCoding geneHOM000460 ORTHO021308
X OS03G62080mRNA%2Ddecapping enzyme, putative, expressedCoding geneHOM001396 ORTHO063845
V OS03G62090CESA5 %2D cellulose synthase, expressedCoding geneHOM000082 ORTHO000003
V OS03G62100MYB family transcription factor, putativeCoding geneHOM000103 ORTHO063846
X OS03G62110nicotinate phosphoribosyltransferase family domain containing protein, expressedCoding geneHOM003060 ORTHO002003
V OS03G62120heat shock protein DnaJ, putativeCoding geneHOM000138 ORTHO063847
V OS03G62130heat shock protein DnaJ, putativeCoding geneHOM000138 ORTHO063848
V OS03G62140heat shock protein DnaJ, putativeCoding geneHOM000138 ORTHO038532
V OS03G62150heat shock protein DnaJ, putativeCoding geneHOM000138 ORTHO063849
X OS03G62160expressed proteinCoding geneHOM005232 ORTHO010078
X OS03G62170cyclase%2Fdehydrase family protein, expressedCoding geneHOM002540 ORTHO005209
V OS03G62180lectin protein kinase family protein, putative, expressedCoding geneHOM000015 ORTHO002384
X OS03G62190transposon protein, putative, unclassifiedTransposon
X OS03G62200ammonium transporter protein, putative, expressedCoding geneHOM000764 ORTHO000595
V OS03G62210subtilisin N%2Dterminal Region family protein, expressedCoding geneHOM004108 ORTHO021307