Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_mtr_64
Cluster type
GO
Species
Medicago truncatula
Chromosome
3
E-value
0.00000000533271
GO label
GO:0006915
GO description
apoptosis
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM00000925952822121
HOM000052105384124
HOM000126545385125

Gene information

In cluster Gene id Description Gene type Gene family
V MT3G031750Cc-nbs-lrr resistance protein (AHRD V1 *-*- B9NBV9_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000052 ORTHO013438
X MT3G031760Unknown Protein (AHRD V1)Coding geneHOM000672 ORTHO100211
X MT3G031770Glucan endo-1,3-beta-glucosidase 9 (AHRD V1 ***- Q9FGH4); contains Interpro domain(s) IPR013781 Glycoside hydrolase, subgroup, catalytic coreCoding geneHOM000021 ORTHO010374
X MT3G031780Lipid phosphate phosphatase 3 (AHRD V1 **** B4FH50_MAIZE); contains Interpro domain(s) IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidaseCoding geneHOM000968 ORTHO035051
X MT3G031790Gamma-interferon-inducible lysosomal thiol reductase (AHRD V1 ***- P13284); contains Interpro domain(s) IPR004911 Gamma interferon inducible lysosomal thiol reductase GILTCoding geneHOM001387 ORTHO010558
X MT3G031800Gamma-interferon-inducible lysosomal thiol reductase (AHRD V1 ***- P13284); contains Interpro domain(s) IPR004911 Gamma interferon inducible lysosomal thiol reductase GILTCoding geneHOM001387 ORTHO010558
X MT3G031805rna_type=pre-trna;ID=Mt3.5Chr3.tRNA.9;Name=Mt3.5Chr3.tRNA.9_Ser_CGA;Ontology_term=SO:0001272;RNA gene
X MT3G031810Unknown Protein (AHRD V1)Coding geneHOM028695 ORTHO059130
X MT3G031820Unknown Protein (AHRD V1)Coding geneHOM000755 ORTHO102336
X MT3G031830Unknown Protein (AHRD V1); contains Interpro domain(s) IPR006936 Protein of unknown function DUF640Coding geneHOM000394 ORTHO031191
X MT3G031840Unknown Protein (AHRD V1)Coding genesingleton
X MT3G031850Unknown Protein (AHRD V1)Coding geneHOM003755 ORTHO003218
X MT3G031860Cc-nbs-lrr resistance protein (AHRD V1 ***- B9HGQ9_POPTR); contains Interpro domain(s) IPR008615 FNIPCoding geneHOM000009 ORTHO037921
X MT3TE031870rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE031880rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 **-- P10978); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G031890Unknown Protein (AHRD V1)Coding geneHOM000970 ORTHO000088
X MT3G031900Unknown Protein (AHRD V1)Coding geneHOM000970 ORTHO000088
X MT3TE031910rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE031920rna_type=pre-trna;Polyprotein (AHRD V1 **-- Q0ZLH4_9ORYZ); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3TE031930rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
V MT3G031940NBS-LRR type disease resistance protein (Fragment) (AHRD V1 *-*- Q1A7F2_VICFA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE031950rna_type=pre-trna;ATP-dependent DNA helicase PIF1 (AHRD V1 ***- Q0R4F1)Transposon
X MT3TE031960rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G031970Unknown Protein (AHRD V1)Coding geneHOM007259 ORTHO013436
X MT3G031980Unknown Protein (AHRD V1)Coding genesingleton
X MT3G031990Unknown Protein (AHRD V1)Coding geneHOM000559 ORTHO000041
X MT3G032000Unknown Protein (AHRD V1)Coding genesingleton
X MT3TE032010rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978); contains Interpro domain(s) IPR001878 Zinc finger, CCHC-typeTransposon
X MT3TE032020rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978); contains Interpro domain(s) IPR001878 Zinc finger, CCHC-typeTransposon
X MT3TE032030rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978); contains Interpro domain(s) IPR001878 Zinc finger, CCHC-typeTransposon
X MT3TE032040rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978); contains Interpro domain(s) IPR001878 Zinc finger, CCHC-typeTransposon
X MT3TE032050rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978); contains Interpro domain(s) IPR001878 Zinc finger, CCHC-typeTransposon
X MT3G032060Unknown Protein (AHRD V1)Coding genesingleton
X MT3G032070Tyrosine-sulfated glycopeptide receptor 1 (AHRD V1 *-*- Q9C7S5); contains Interpro domain(s) IPR017442 Serine/threonine protein kinase-relatedCoding geneHOM000015 ORTHO137407
X MT3G032080Unknown Protein (AHRD V1)Coding genesingleton
X MT3TE032090rna_type=pre-trna;LINE-type retrotransposon LIb DNA complete sequence Insertion at the S14 site (AHRD V1 ***- Q2HX37_IPOBA); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3G032100Unknown Protein (AHRD V1); contains Interpro domain(s) IPR005134 Uncharacterised protein family UPF0114Coding geneHOM001437 ORTHO161968
V MT3G032110Cc-nbs resistance protein (Fragment) (AHRD V1 *-*- B9NH38_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE032120rna_type=pre-trna;Gag-pol polyprotein (AHRD V1 ***- Q84VI2_SOYBN)Transposon
X MT3G032130Unknown Protein (AHRD V1)Coding geneHOM017091 ORTHO037903
X MT3G032140Cc-nbs-lrr resistance protein (Fragment) (AHRD V1 *-*- B9GLY8_POPTR)Coding geneHOM000009 ORTHO059193
V MT3G032150NBS-LRR resistance-like protein 1N (Fragment) (AHRD V1 *-*- B9UNN3_LACSA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE032160rna_type=pre-trna;Polyprotein (Fragment) (AHRD V1 *--- Q153Y7_CYNSC); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G032170Genomic DNA chromosome 5 P1 clone MSH12 (AHRD V1 **-- Q9FNA1_ARATH)Coding geneHOM001437 ORTHO059194
X MT3G032175rna_type=pre-trna;ID=Mt3.5Chr3.tRNA.107;Name=Mt3.5Chr3.tRNA.107_Trp_CCA;Ontology_term=SO:0001272;RNA gene
X MT3TE032180rna_type=pre-trna;ATP-dependent DNA helicase PIF1 (AHRD V1 *-*- Q0R4F1)Transposon
X MT3G032190Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012340 Nucleic acid-binding, OB-foldCoding geneHOM000801 ORTHO000728
V MT3G032200NBS-LRR type disease resistance protein (Fragment) (AHRD V1 *-*- Q1A7F2_VICFA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G032210Genomic DNA chromosome 5 P1 clone MSH12 (AHRD V1 *--- Q9FNA1_ARATH); contains Interpro domain(s) IPR005134 Uncharacterised protein family UPF0114Coding geneHOM001437 ORTHO130826
X MT3TE032220rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE032230rna_type=pre-trna;Retrotransposon gag protein (AHRD V1 ***- Q2AA09_ASPOF); contains Interpro domain(s) IPR005162 Retrotransposon gag proteinTransposon
X MT3TE032240rna_type=pre-trna;Retrotransposon gag protein (AHRD V1 ***- Q2AA50_ASPOF); contains Interpro domain(s) IPR005162 Retrotransposon gag proteinTransposon
X MT3TE032250rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004312 Arabidopsis retrotransposon ORF-1 proteinTransposon
X MT3G032260Unknown Protein (AHRD V1)Coding geneHOM005143 ORTHO058421
X MT3TE032270rna_type=pre-trna;Transposon Ty3-G Gag-Pol polyprotein (AHRD V1 *--- Q99315); contains Interpro domain(s) IPR005162 Retrotransposon gag proteinTransposon
X MT3TE032280rna_type=pre-trna;Integrase (Fragment) (AHRD V1 *--- Q9LL17_9ORYZ); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3G032290Unknown Protein (AHRD V1)Coding geneHOM006726 ORTHO012335
X MT3TE032300rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004312 Arabidopsis retrotransposon ORF-1 proteinTransposon
X MT3TE032310rna_type=pre-trna;Retrotransposon gag protein (AHRD V1 *-*- Q2AA09_ASPOF); contains Interpro domain(s) IPR005162 Retrotransposon gag proteinTransposon
X MT3TE032320rna_type=pre-trna;Aminotransferase-like protein (AHRD V1 *-*- Q5SNB2_ORYSJ); contains Interpro domain(s) IPR019557 Aminotransferase-like, plant mobile domainTransposon
X MT3G032330Unknown Protein (AHRD V1); contains Interpro domain(s) IPR012340 Nucleic acid-binding, OB-foldCoding geneHOM000947 ORTHO037930
X MT3G032335rna_type=pre-trna;ID=Mt3.5Chr3.tRNA.106;Name=Mt3.5Chr3.tRNA.106_Pseudo_ATT;Ontology_term=SO:0001272;RNA gene
V MT3G032340NBS-LRR type disease resistance protein (Fragment) (AHRD V1 *-*- Q1A7C6_VICFA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE032350rna_type=pre-trna;Gag-pol polyprotein (AHRD V1 ***- Q84VI2_SOYBN)Transposon
X MT3G032360Disease resistance protein R3a-like protein (Fragment) (AHRD V1 --*- B3F575_SOLDE)Coding geneHOM000009 ORTHO059193
V MT3G032370Cc-nbs-lrr resistance protein (Fragment) (AHRD V1 *-*- B9NDE0_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE032380rna_type=pre-trna;Polyprotein (Fragment) (AHRD V1 *--- Q153Y7_CYNSC); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G032390Genomic DNA chromosome 5 P1 clone MSH12 (AHRD V1 ***- Q9FNA1_ARATH)Coding geneHOM001437 ORTHO059194
X MT3G032395rna_type=pre-trna;ID=Mt3.5Chr3.tRNA.105;Name=Mt3.5Chr3.tRNA.105_Trp_CCA;Ontology_term=SO:0001272;RNA gene
X MT3G032400Unknown Protein (AHRD V1); contains Interpro domain(s) IPR001045 Spermine synthaseCoding geneHOM002327 ORTHO000088
X MT3TE032410rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G032420Unknown Protein (AHRD V1)Coding geneHOM004578 ORTHO002871
X MT3G032430ATP-dependent DNA helicase PIF1 (AHRD V1 ***- Q1HG60)Coding geneHOM000060 ORTHO059195
X MT3G032440Unknown Protein (AHRD V1)Coding geneHOM004764 ORTHO003682
X MT3G032450Unknown Protein (AHRD V1)Coding geneHOM000060 ORTHO259050
X MT3TE032460rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE032470rna_type=pre-trna;Helicase-like protein (AHRD V1 ***- Q84QR0_ORYSJ)Transposon
X MT3TE032480rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE032490rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
V MT3G032500NBS-LRR type disease resistance protein (Fragment) (AHRD V1 *-*- Q1A7C9_VICFA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G032510Unknown Protein (AHRD V1)Coding genesingleton
X MT3G032520Unknown Protein (AHRD V1)Coding geneHOM006621 ORTHO013300
X MT3G032530Cycloartenol-C-24-methyltransferase (AHRD V1 **** Q9LM02); contains Interpro domain(s) IPR013705 Sterol methyltransferase C-terminalCoding geneHOM001119 ORTHO004548
X MT3G032540Unknown Protein (AHRD V1)Coding genesingleton
X MT3G032550Unknown Protein (AHRD V1); contains Interpro domain(s) IPR003323 Ovarian tumour, otubainCoding geneHOM000006 ORTHO000192
X MT3G032560Unknown Protein (AHRD V1)Coding geneHOM000195 ORTHO000072
X MT3G032570Defensin (AHRD V1 ***- C1K3M7_VIGUN); contains Interpro domain(s) IPR008177 Gamma PurothioninCoding geneHOM000379 ORTHO143070
X MT3TE032580rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G032590A subunit of NADH dehydrogenase (Fragment) (AHRD V1 *-*- B3IT66_9FABA); contains Interpro domain(s) IPR015655 Protein phosphatase 2CCoding geneHOM000435 ORTHO020684
X MT3G032600Unknown Protein (AHRD V1)Coding geneHOM000195 ORTHO000072
X MT3G032610Movement protein (AHRD V1 ***- P15631); contains Interpro domain(s) IPR001022 Tobamoviral movement proteinCoding geneHOM004930 ORTHO005426
X MT3G032620Unknown Protein (AHRD V1)Coding geneHOM004930 ORTHO005426
X MT3G032630Unknown Protein (AHRD V1)Coding genesingleton
X MT3G032640Movement protein (AHRD V1 ***- P15631); contains Interpro domain(s) IPR001022 Tobamoviral movement proteinCoding geneHOM004930 ORTHO005426
X MT3G032650Unknown Protein (AHRD V1)Coding genesingleton
X MT3G032660Unknown Protein (AHRD V1); contains Interpro domain(s) IPR015655 Protein phosphatase 2CCoding geneHOM000435 ORTHO020684
X MT3TE032670rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3TE032680rna_type=pre-trna;Transposase (Fragment) (AHRD V1 ***- Q49KC7_PEA)Transposon
X MT3G032690Unknown Protein (AHRD V1); contains Interpro domain(s) IPR008176 Gamma thioninCoding geneHOM008985 ORTHO024971
X MT3G032700Catalytic/ protein phosphatase type 2C (AHRD V1 *-*- B6TAL6_MAIZE); contains Interpro domain(s) IPR015655 Protein phosphatase 2CCoding geneHOM000435 ORTHO020684
X MT3G032710Unknown Protein (AHRD V1)Coding genesingleton
X MT3G032720Unknown Protein (AHRD V1)Coding genesingleton
X MT3G032730Unknown Protein (AHRD V1)Coding geneHOM000126 ORTHO000024
X MT3G032740Unknown Protein (AHRD V1)Coding geneHOM003086 ORTHO003949
X MT3G032750Unknown Protein (AHRD V1)Coding geneHOM015005 ORTHO059196
V MT3G032760NBS-LRR type disease resistance protein (Fragment) (AHRD V1 *-*- Q1A7C6_VICFA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G032770Unknown Protein (AHRD V1); contains Interpro domain(s) IPR005134 Uncharacterised protein family UPF0114Coding geneHOM001437 ORTHO059197
X MT3G032780F-box/kelch-repeat protein At5g42350 (AHRD V1 *-*- Q9FII2); contains Interpro domain(s) IPR015915 Kelch-type beta propellerCoding geneHOM005459 ORTHO059198
X MT3G032790Pentatricopeptide repeat-containing protein At3g53170 (AHRD V1 ***- Q9SCP4)Coding geneHOM000003 ORTHO161565
V MT3G032800Cc-nbs-lrr resistance protein (Fragment) (AHRD V1 *-*- B9NDE0_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G032810Genomic DNA chromosome 5 P1 clone MSH12 (AHRD V1 **-- Q9FNA1_ARATH)Coding geneHOM001437 ORTHO227798
X MT3G032820Unknown Protein (AHRD V1); contains Interpro domain(s) IPR005134 Uncharacterised protein family UPF0114Coding geneHOM001437 ORTHO008032
X MT3G032830F-box/kelch-repeat protein At5g42350 (AHRD V1 ***- Q9FII2); contains Interpro domain(s) IPR001810 Cyclin-like F-boxCoding geneHOM005459 ORTHO059198
X MT3TE032840rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon 297 (AHRD V1 ***- P20825); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3G032850Unknown Protein (AHRD V1)Coding geneHOM000373 ORTHO037841
X MT3TE032860rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR019557 Aminotransferase-like, plant mobile domainTransposon
X MT3TE032870rna_type=pre-trna;Gag/pol polyprotein (AHRD V1 ***- Q6WAY3_PEA); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3G032880Unknown Protein (AHRD V1)Coding geneHOM000820 ORTHO000085
X MT3TE032890rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE032900rna_type=pre-trna;Reverse transcriptase (Fragment) (AHRD V1 *-*- Q6B4F3_9FABA); contains Interpro domain(s) IPR013242 Retroviral aspartyl proteaseTransposon
X MT3G032910Unknown Protein (AHRD V1)Coding geneHOM016785 ORTHO037931
X MT3TE032920rna_type=pre-trna;Polyprotein (AHRD V1 **-- Q0ZLH4_9ORYZ); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3TE032930rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G032940Unknown Protein (AHRD V1)Coding geneHOM000755 ORTHO197953
X MT3G032950Unknown Protein (AHRD V1)Coding geneHOM000056 ORTHO145334
V MT3G032960NBS-LRR type disease resistance protein (Fragment) (AHRD V1 *-*- Q1A7C9_VICFA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE032970rna_type=pre-trna;Genomic DNA chromosome 5 P1 clone MSH12 (AHRD V1 *--- Q9FNA1_ARATH); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3G032980Alpha-N-acetylglucosaminidase (AHRD V1 **** Q9FNA3_ARATH); contains Interpro domain(s) IPR007781 Alpha-N-acetylglucosaminidaseCoding geneHOM002398 ORTHO002257
X MT3TE032990rna_type=pre-trna;Integrase (AHRD V1 *-*- B6REL8_9BRAS); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G033000Polyamine oxidase (AHRD V1 **** Q4H439_TOBAC); contains Interpro domain(s) IPR002937 Amine oxidaseCoding geneHOM002600 ORTHO012160
X MT3G033010Unknown Protein (AHRD V1)Coding geneHOM000203 ORTHO014499
X MT3G033020Unknown Protein (AHRD V1)Coding genesingleton
X MT3TE033030rna_type=pre-trna;Potato DNA for copia-like transposable element (AHRD V1 ***- Q04356_SOLTU)Transposon
X MT3G033040Pentatricopeptide repeat-containing protein At3g53170 (AHRD V1 ***- Q9SCP4); contains Interpro domain(s) IPR002885 Pentatricopeptide repeatCoding geneHOM000003 ORTHO007980
X MT3G033050Unknown Protein (AHRD V1)Coding geneHOM001026 ORTHO000110
X MT3TE033060rna_type=pre-trna;Ac transposase-like protein (AHRD V1 ***- Q9LH75_ARATH); contains Interpro domain(s) IPR008906 HAT dimerisationTransposon
X MT3TE033070rna_type=pre-trna;Transposon TX1 uncharacterized 149 kDa protein (AHRD V1 ***- P14381); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
V MT3G033080Cc-nbs-lrr resistance protein (AHRD V1 ***- B9HGQ9_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G033090Unknown Protein (AHRD V1)Coding geneHOM006439 ORTHO008317
X MT3G033100Nodule-specific cysteine-rich peptide 284 (AHRD V1 ***- A7KHD2_MEDTR); contains Interpro domain(s) IPR009810 Late nodulinCoding geneHOM016787 ORTHO037932
V MT3G033110NBS-LRR type disease resistance protein (Fragment) (AHRD V1 *-*- Q1A7C9_VICFA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G033120Unknown Protein (AHRD V1)Coding genesingleton
V MT3G033130NBS-LRR type disease resistance protein (Fragment) (AHRD V1 *-*- Q1A7F2_VICFA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE033140rna_type=pre-trna;Reverse transcriptase (Fragment) (AHRD V1 *--- Q2EIR3_PHEHR); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G033150RNA polymerase sigma factor rpoD (AHRD V1 ***- P74565); contains Interpro domain(s) IPR013324 RNA polymerase sigma factor, region 3/4Coding geneHOM001089 ORTHO162971
X MT3G033160Cc-nbs resistance protein (AHRD V1 *-*- B9NAK0_POPTR)Coding geneHOM000009 ORTHO213569
X MT3TE033170rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 **-- P10978); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3TE033180rna_type=pre-trna;Reverse transcriptase-like protein (Fragment) (AHRD V1 *--- O22103_VICFA); contains Interpro domain(s) IPR000477 RNA-directed DNA polymerase (reverse transcriptase)Transposon
X MT3TE033190rna_type=pre-trna;Retroelement pol polyprotein-like (AHRD V1 *-*- Q9FZN9_ARATH)Transposon
X MT3TE033200rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE033210rna_type=pre-trna;Retrovirus-related like polyprotein (AHRD V1 *-*- O23302_ARATH)Transposon
X MT3TE033220rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE033230rna_type=pre-trna;Polyprotein (AHRD V1 *-*- O23864_9ORYZ)Transposon
V MT3G033240Cc-nbs-lrr resistance protein (AHRD V1 ***- B9GWM3_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE033250rna_type=pre-trna;Reverse transcriptase (Fragment) (AHRD V1 *-*- Q6B3R9_9FABA); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G033260Nodule-specific cysteine-rich peptide 263 (AHRD V1 ***- A7KHC8_MEDTR); contains Interpro domain(s) IPR009810 Late nodulinCoding geneHOM016787 ORTHO037932
X MT3TE033270rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978)Transposon
X MT3G033280Unknown Protein (AHRD V1)Coding geneHOM001339 ORTHO001628
X MT3TE033290rna_type=pre-trna;Reverse transcriptase (Fragment) (AHRD V1 *--- Q4JQ45_CYCRE); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G033300Unknown Protein (AHRD V1)Coding geneHOM004764 ORTHO003682
X MT3TE033310rna_type=pre-trna;Transposon TX1 uncharacterized 149 kDa protein (AHRD V1 *-*- P14381); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3TE033320rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3TE033330rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 *--- P10978); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3TE033340rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE033350rna_type=pre-trna;Gag/pol polyprotein (AHRD V1 ***- Q6WAY3_PEA); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3G033360Unknown Protein (AHRD V1)Coding geneHOM000820 ORTHO000085
X MT3TE033370rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
V MT3G033380NBS-LRR type disease resistance protein (Fragment) (AHRD V1 *-*- Q1A7F2_VICFA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
V MT3G033390NBS-LRR resistance-like protein 1O (Fragment) (AHRD V1 *-*- B9UNP0_LACSA); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO175360
X MT3TE033400rna_type=pre-trna;Reverse transcriptase (Fragment) (AHRD V1 *--- Q8W2H7_9POAL); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G033410Unknown Protein (AHRD V1)Coding genesingleton
X MT3G033420RNA polymerase sigma factor rpoD (AHRD V1 *-*- P74565); contains Interpro domain(s) IPR013325 RNA polymerase sigma factor, region 2Coding geneHOM001089 ORTHO013634
X MT3G033430Structural maintenance of chromosomes protein 5 (AHRD V1 ***- Q8CG46); contains Interpro domain(s) IPR003395 RecF/RecN/SMC protein, N-terminalCoding geneHOM000026 ORTHO003139
X MT3G033440Unknown Protein (AHRD V1)Coding geneHOM025485 ORTHO059199
X MT3G033450Unknown Protein (AHRD V1)Coding geneHOM000026 ORTHO110098
X MT3TE033460rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon 17.6 (AHRD V1 ***- P04323)Transposon
X MT3G033470Structural maintenance of chromosomes protein 5 (AHRD V1 ***- Q805A1)Coding geneHOM000026 ORTHO003139
X MT3G033480Unknown Protein (AHRD V1)Coding geneHOM007675 ORTHO015066
X MT3G033490Unknown Protein (AHRD V1)Coding geneHOM008140 ORTHO015667
X MT3TE033500rna_type=pre-trna;Gag/pol polyprotein (AHRD V1 *-*- Q6WAY3_PEA)Transposon
X MT3G033510Unknown Protein (AHRD V1)Coding genesingleton
X MT3G033520Protein PNS1 (AHRD V1 *--- Q4PIP8); contains Interpro domain(s) IPR007603 Protein of unknown function DUF580Coding geneHOM001450 ORTHO003543
X MT3G033530Unknown Protein (AHRD V1)Coding geneHOM006116 ORTHO007093
X MT3TE033540rna_type=pre-trna;LINE-1 reverse transcriptase homolog (AHRD V1 *-*- P08548); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3G033550Unknown Protein (AHRD V1)Coding genesingleton
X MT3G033560Unknown Protein (AHRD V1)Coding geneHOM001339 ORTHO020670
X MT3G033570Unknown Protein (AHRD V1)Coding geneHOM009256 ORTHO024906
X MT3G033580Unknown Protein (AHRD V1)Coding geneHOM001017 ORTHO115954
X MT3TE033590rna_type=pre-trna;Integrase (Fragment) (AHRD V1 *-*- Q9LL13_9ORYZ); contains Interpro domain(s) IPR002156 Ribonuclease HTransposon
X MT3G033600Unknown Protein (AHRD V1)Coding geneHOM006726 ORTHO012335
X MT3TE033610rna_type=pre-trna;Aminotransferase-like (AHRD V1 *-*- Q5Z6H6_ORYSJ); contains Interpro domain(s) IPR019557 Aminotransferase-like, plant mobile domainTransposon
X MT3TE033620rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR019557 Aminotransferase-like, plant mobile domainTransposon
X MT3TE033630rna_type=pre-trna;Retrovirus-related Pol polyprotein LINE-1 (AHRD V1 *-*- P11369); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3TE033640rna_type=pre-trna;Non-LTR retroelement reverse transcriptase-like (AHRD V1 *-*- Q9FG26_ARATH); contains Interpro domain(s) IPR002156 Ribonuclease HTransposon
X MT3G033650Unknown Protein (AHRD V1)Coding geneHOM004338 ORTHO015684
X MT3TE033660rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G033670Unknown Protein (AHRD V1)Coding genesingleton
X MT3G033680Unknown Protein (AHRD V1)Coding genesingleton
X MT3G033690Pectinesterase (AHRD V1 ***- B9ICT2_POPTR); contains Interpro domain(s) IPR000070 Pectinesterase, catalyticCoding geneHOM000034 ORTHO005147
X MT3G033700Unknown Protein (AHRD V1)Coding geneHOM004338 ORTHO263081
X MT3G033710Unknown Protein (AHRD V1)Coding geneHOM005143 ORTHO149043
X MT3G033720Unknown Protein (AHRD V1)Coding genesingleton
X MT3G033730Vacuolar amino acid transporter 1 (AHRD V1 ***- P47082); contains Interpro domain(s) IPR013057 Amino acid transporter, transmembraneCoding geneHOM000358 ORTHO007254
X MT3TE033740rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G033750Unknown Protein (AHRD V1)Coding geneHOM029853 ORTHO059200
X MT3TE033760rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE033770rna_type=pre-trna;Gag-pol polyprotein (AHRD V1 *-*- Q69F85_PHAVU); contains Interpro domain(s) IPR005162 Retrotransposon gag proteinTransposon
X MT3G033780Unknown Protein (AHRD V1)Coding genesingleton
X MT3G033790Beta-glucosidase G4 (AHRD V1 ***- A8TVR1_MEDTR); contains Interpro domain(s) IPR001360 Glycoside hydrolase, family 1Coding geneHOM000064 ORTHO006025
X MT3TE033800rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3G033810Beta-glucosidase G4 (AHRD V1 ***- A8TVR1_MEDTR); contains Interpro domain(s) IPR013781 Glycoside hydrolase, subgroup, catalytic coreCoding geneHOM000064 ORTHO006025
X MT3G033820Unknown Protein (AHRD V1)Coding geneHOM000400 ORTHO000375
X MT3G033830Unknown Protein (AHRD V1)Coding genesingleton
X MT3G033840Unknown Protein (AHRD V1)Coding geneHOM002738 ORTHO000811
X MT3G033850Unknown Protein (AHRD V1)Coding geneHOM000195 ORTHO018514
V MT3G033860Cc-nbs-lrr resistance protein (AHRD V1 ***- B9NCF9_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G033870Unknown Protein (AHRD V1)Coding geneHOM012076 ORTHO024986
X MT3G033880Unknown Protein (AHRD V1)Coding geneHOM012076 ORTHO024986
X MT3TE033890rna_type=pre-trna;Reverse transcriptase (Fragment) (AHRD V1 *--- Q4JQ47_PTEAQ); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3TE033900rna_type=pre-trna;Pol polyprotein (AHRD V1 *-*- P10272); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3TE033910rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR005162 Retrotransposon gag proteinTransposon
X MT3TE033920rna_type=pre-trna;Gag-pol polyprotein (AHRD V1 *-*- Q69F85_PHAVU); contains Interpro domain(s) IPR009810 Late nodulinTransposon
X MT3G033930Nodule-specific cysteine-rich peptide 93 (AHRD V1 ***- A7KH85_MEDTR); contains Interpro domain(s) IPR009810 Late nodulinCoding geneHOM000140 ORTHO018501
X MT3TE033940rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G033950Unknown Protein (AHRD V1)Coding geneHOM000375 ORTHO058656
X MT3G033960Unknown Protein (AHRD V1)Coding genesingleton
X MT3G033970Unknown Protein (AHRD V1)Coding geneHOM000140 ORTHO009794
X MT3G033980Unknown Protein (AHRD V1)Coding geneHOM000009 ORTHO110257
X MT3TE033990rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978)Transposon
X MT3G034000Unknown Protein (AHRD V1)Coding geneHOM002738 ORTHO000811
X MT3G034010NB-LRR type disease resistance protein Rps1-k-2 (AHRD V1 ***- Q2YE87_SOYBN)Coding geneHOM000009 ORTHO193007
X MT3TE034020rna_type=pre-trna;ATP-dependent DNA helicase PIF1 (AHRD V1 ***- Q0R4F1)Transposon
X MT3G034030Disease resistance response protein 206 (AHRD V1 ***- P13240); contains Interpro domain(s) IPR004265 Plant disease resistance response proteinCoding geneHOM000170 ORTHO053399
X MT3G034040Unknown Protein (AHRD V1)Coding geneHOM000195 ORTHO001759
X MT3TE034050rna_type=pre-trna;Retrovirus-related Pol polyprotein LINE-1 (AHRD V1 *--- P11369); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3G034060Unknown Protein (AHRD V1)Coding geneHOM017617 ORTHO037933
X MT3G034070Unknown Protein (AHRD V1)Coding genesingleton
X MT3G034080Unknown Protein (AHRD V1)Coding genesingleton
X MT3G034090Ran-binding protein 1 homolog a (AHRD V1 *-*- Q9LMK7); contains Interpro domain(s) IPR000156 Ran Binding Protein 1Coding geneHOM000624 ORTHO056998
X MT3G034100Serine/threonine protein kinase (AHRD V1 **** B6TWS7_MAIZE); contains Interpro domain(s) IPR015783 ATMRK serine/threonine protein kinase-likeCoding geneHOM000027 ORTHO001027
X MT3G034110Unknown Protein (AHRD V1)Coding geneHOM000182 ORTHO201175
X MT3G034120Unknown Protein (AHRD V1)Coding genesingleton
X MT3G034130F-box (AHRD V1 ***- Q84KQ8_PRUMU); contains Interpro domain(s) IPR001810 Cyclin-like F-box IPR017451 F-box associated type 1Coding geneHOM000048 ORTHO013916
X MT3G034140Unknown Protein (AHRD V1)Coding genesingleton
X MT3TE034150rna_type=pre-trna;Transposon Ty1-A Gag-Pol polyprotein (AHRD V1 *-*- O13527); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G034160F-box/kelch-repeat protein At3g06240 (AHRD V1 ***- Q8GXC7); contains Interpro domain(s) IPR017451 F-box associated type 1Coding geneHOM000048 ORTHO013916
X MT3TE034170rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR005162 Retrotransposon gag proteinTransposon
X MT3G034180F-box protein At2g40910 (AHRD V1 *-*- Q3EBI7); contains Interpro domain(s) IPR017451 F-box associated type 1Coding geneHOM000048 ORTHO013916
X MT3G034190Unknown Protein (AHRD V1)Coding geneHOM008445 ORTHO016388
X MT3G034200N-terminal acetyltransferase complex ARD1 subunit homolog B (AHRD V1 ***- Q3UX61); contains Interpro domain(s) IPR000182 GCN5-related N-acetyltransferaseCoding geneHOM001643 ORTHO006621
X MT3G034210F-box/WD-40 repeat-containing protein At3g52030 (AHRD V1 ***- Q9SV01); contains Interpro domain(s) IPR017986 WD40 repeat, regionCoding geneHOM001643 ORTHO007977
X MT3G034220Unknown Protein (AHRD V1)Coding genesingleton
X MT3G034230Unknown Protein (AHRD V1)Coding geneHOM005992 ORTHO009077
X MT3G034240Unknown Protein (AHRD V1)Coding geneHOM005517 ORTHO009074
X MT3G034250Unknown Protein (AHRD V1)Coding geneHOM000195 ORTHO024898
X MT3G034260Unknown Protein (AHRD V1)Coding geneHOM000195 ORTHO000072
X MT3TE034270rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G034280Unknown Protein (AHRD V1)Coding genesingleton
X MT3G034290Serine carboxypeptidase-like 40 (AHRD V1 **** Q0WRX3); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidaseCoding geneHOM000054 ORTHO003513
X MT3G034300Unknown Protein (AHRD V1)Coding geneHOM002303 ORTHO004773
X MT3TE034310rna_type=pre-trna;Mutator-like transposase (AHRD V1 *-*- Q94HK4_ORYSA); contains Interpro domain(s) IPR006564 Zinc finger, PMZ-typeTransposon
X MT3G034320Unknown Protein (AHRD V1)Coding geneHOM000820 ORTHO000085
X MT3TE034330rna_type=pre-trna;Pol polyprotein (AHRD V1 ***- P11227); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3TE034340rna_type=pre-trna;Gag-pro (AHRD V1 ***- D0E2V7_PEA); contains Interpro domain(s) IPR005162 Retrotransposon gag proteinTransposon
X MT3TE034350rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE034360rna_type=pre-trna;Mutator-like transposase (AHRD V1 *-*- Q8S8K7_ARATH); contains Interpro domain(s) IPR018289 MULE transposase, conserved domainTransposon
X MT3G034370Unknown Protein (AHRD V1)Coding geneHOM006747 ORTHO011110
V MT3G034380Cc-nbs resistance protein (Fragment) (AHRD V1 *-*- B9NH38_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G034390Unknown Protein (AHRD V1)Coding geneHOM000126 ORTHO000024
X MT3G034400Unknown Protein (AHRD V1)Coding geneHOM009912 ORTHO020644
X MT3G034410Unknown Protein (AHRD V1)Coding geneHOM006747 ORTHO011110
X MT3G034420Unknown Protein (AHRD V1)Coding geneHOM012076 ORTHO024986
V MT3G034430Cc-nbs-lrr resistance protein (Fragment) (AHRD V1 ***- B9GLY8_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
V MT3G034440NBS-LRR resistance-like protein 1P (Fragment) (AHRD V1 *-*- B9UNQ1_9ASTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000126 ORTHO000024
X MT3G034450Unknown Protein (AHRD V1)Coding geneHOM012076 ORTHO024986
V MT3G034460Cc-nbs-lrr resistance protein (AHRD V1 ***- B9GWL8_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE034470rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978); contains Interpro domain(s) IPR001878 Zinc finger, CCHC-typeTransposon
X MT3TE034480rna_type=pre-trna;Non-LTR retroelement reverse transcriptase-like protein (AHRD V1 *-*- Q9FL83_ARATH); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3TE034490rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE034500rna_type=pre-trna;Gag/pol polyprotein (AHRD V1 ***- Q6WAY3_PEA)Transposon
X MT3TE034510rna_type=pre-trna;Transposon Ty4-J Gag-Pol polyprotein (AHRD V1 *-*- P47024); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G034520Unknown Protein (AHRD V1)Coding geneHOM000400 ORTHO000375
X MT3TE034530rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G034540Unknown Protein (AHRD V1)Coding geneHOM006747 ORTHO115506
X MT3TE034550rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3TE034560rna_type=pre-trna;Transposon Ty1-H Gag-Pol polyprotein (AHRD V1 *-*- O13535); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G034570Unknown Protein (AHRD V1)Coding geneHOM000970 ORTHO000088
X MT3G034580Unknown Protein (AHRD V1)Coding geneHOM002860 ORTHO001127
X MT3TE034590rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3G034600Unknown Protein (AHRD V1)Coding geneHOM000400 ORTHO029404
X MT3G034610Organ-specific protein S2 (AHRD V1 *-*- P17772)Coding geneHOM006235 ORTHO010507
X MT3G034620Unknown Protein (AHRD V1)Coding genesingleton
X MT3G034630Unknown Protein (AHRD V1)Coding genesingleton
X MT3G034640Organ-specific protein S2 (AHRD V1 *-*- P17772)Coding geneHOM006235 ORTHO010507
V MT3G034650Cc-nbs-lrr resistance protein (AHRD V1 ***- B9N450_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012