Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_mtr_54
Cluster type
GO
Species
Medicago truncatula
Chromosome
7
E-value
0.0000000000839587
GO label
GO:0016020
GO description
membrane
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM000031162084922
HOM0000331489881125
HOM000115582162423
HOM00012156437125
HOM00032326810120
HOM0009191214124

Gene information

In cluster Gene id Description Gene type Gene family
V MT7G098040Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO000309
X MT7G098050Unknown Protein (AHRD V1)Coding genesingleton
X MT7G098060Maturase K (AHRD V1 ***- Q5YK21_MEDSA); contains Interpro domain(s) IPR002866 Maturase, MatK, N-terminalCoding geneHOM000961 ORTHO234630
X MT7G098070Subtilisin-like serine protease (AHRD V1 **** C3VDI0_CARPA); contains Interpro domain(s) IPR015500 Peptidase S8, subtilisin-relatedCoding geneHOM000020 ORTHO000109
X MT7G098080Peptide transporter PTR3-B (AHRD V1 ***- Q9FNL8)Coding geneHOM000031 ORTHO150692
V MT7G098090Peptide transporter PTR3-B (AHRD V1 **** Q9FNL8); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO000309
X MT7G098100Unknown Protein (AHRD V1)Coding geneHOM026095 ORTHO058580
X MT7TE098110rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT7TE098120rna_type=pre-trna;Pol polyprotein (AHRD V1 *-*- P26809); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT7G098130Unknown Protein (AHRD V1)Coding geneHOM009094 ORTHO017289
X MT7G098140Unknown Protein (AHRD V1)Coding geneHOM026095 ORTHO255344
V MT7G098150Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO000309
V MT7G098160Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO000309
X MT7G098170PHD finger protein 11-like (AHRD V1 *--- Q8BVM9); contains Interpro domain(s) IPR001357 BRCTCoding geneHOM002223 ORTHO005456
V MT7G098180Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO000309
X MT7G098190Elongation factor 1-alpha (AHRD V1 ***- Q9M7E6_MAIZE); contains Interpro domain(s) IPR000795 Protein synthesis factor, GTP-bindingCoding geneHOM000248 ORTHO235628
V MT7G098200Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO000309
V MT7G098210Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO000309
V MT7G098220Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO000309
V MT7G098230Peptide transporter PTR3-A (AHRD V1 **** Q9FNL7); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO000309
X MT7G098235rna_type=pre-trna;ID=Mt3.5.1Chr7.tRNA.37;Name=Mt3.5.1Chr7.tRNA.37_Met_CAT;Ontology_term=SO:0001272;intron=30490944-30490954RNA gene
X MT7G098240Leucine-rich repeat receptor protein kinase EXS (AHRD V1 *--- Q9LYN8); contains Interpro domain(s) IPR001611 Leucine-rich repeatCoding geneHOM000002 ORTHO001123
X MT7G098250Two-component response regulator ARR2 (AHRD V1 *--- Q9ZWJ9); contains Interpro domain(s) IPR006447 Myb-like DNA-binding region, SHAQKYF classCoding geneHOM000080 ORTHO005301
X MT7G098260Unknown Protein (AHRD V1)Coding geneHOM007137 ORTHO012325
X MT7G098270Auxin-induced in root cultures protein 12 (AHRD V1 *-*- Q94BT2); contains Interpro domain(s) IPR007613 Protein of unknown function DUF568, DOMON-likeCoding geneHOM000285 ORTHO173404
X MT7G098280Unknown Protein (AHRD V1)Coding geneHOM000080 ORTHO053711
X MT7G09829060S ribosomal protein L23 (AHRD V1 ***- B4FGL4_MAIZE); contains Interpro domain(s) IPR000218 Ribosomal protein L14b/L23eCoding geneHOM001177 ORTHO000516
V MT7G098300Pleiotropic drug resistance protein (AHRD V1 *-*- B9H0A7_POPTR); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO000005
X MT7G098310Pleiotropic drug resistance protein 6 (AHRD V1 ***- Q8GU87)Coding geneHOM000033 ORTHO162229
V MT7G098320Pleiotropic drug resistance ABC transporter family protein (Fragment) (AHRD V1 **** B9GL02_POPTR); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO000005
V MT7G098330Pleiotropic drug resistance protein 3 (AHRD V1 ***- Q0JLC5); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO128163
V MT7G098340Pleiotropic drug resistance ABC transporter family protein (Fragment) (AHRD V1 **** B9GL02_POPTR); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO159893
X MT7TE098350rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 *-*- P10978)Transposon
X MT7G098360Unknown Protein (AHRD V1)Coding geneHOM000053 ORTHO081373
V MT7G098370Pleiotropic drug resistance protein 1 (AHRD V1 ***- Q76CU2); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO000005
X MT7G098380Unknown Protein (AHRD V1)Coding genesingleton
X MT7G098390Histone-lysine N-methyltransferase SUVR4 (AHRD V1 *-*- Q8W595); contains Interpro domain(s) IPR001214 SETCoding geneHOM001517 ORTHO003272
X MT7G098400Unknown Protein (AHRD V1)Coding genesingleton
X MT7G098410Cysteine-rich repeat secretory protein 56 (AHRD V1 ***- Q8GXV7); contains Interpro domain(s) IPR002902 Protein of unknown function DUF26Coding geneHOM000807 ORTHO012106
X MT7G098420Unknown Protein (AHRD V1)Coding genesingleton
X MT7G098430Pre-mRNA-processing factor 39 (AHRD V1 ***- Q86UA1); contains Interpro domain(s) IPR003107 RNA-processing protein, HAT helixCoding geneHOM000617 ORTHO006107
X MT7G098440Ras GTPase-activating protein-binding protein 1 (AHRD V1 *-*- Q13283); contains Interpro domain(s) IPR018222 Nuclear transport factor 2, EukaryoteCoding geneHOM000591 ORTHO012661
X MT7G098450TPR domain protein (Fragment) (AHRD V1 *-*- Q1HEA3_MUSAC); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helicalCoding geneHOM000577 ORTHO011052
X MT7G098460Unknown Protein (AHRD V1)Coding geneHOM000471 ORTHO013960
X MT7G098470Unknown Protein (AHRD V1)Coding geneHOM005246 ORTHO007166
V MT7G098480F-box/FBD/LRR-repeat protein At4g26340 (AHRD V1 ***- Q8H1R7); contains Interpro domain(s) IPR013596 FBDCoding geneHOM000115 ORTHO002091
X MT7TE098490rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT7G098500Unknown Protein (AHRD V1)Coding genesingleton
V MT7G098510F-box/FBD/LRR-repeat protein At4g26340 (AHRD V1 ***- Q8H1R7); contains Interpro domain(s) IPR013596 FBDCoding geneHOM000115 ORTHO002091
X MT7G098520Unknown Protein (AHRD V1)Coding genesingleton
X MT7G098530Unknown Protein (AHRD V1)Coding genesingleton
X MT7G098540Unknown Protein (AHRD V1); contains Interpro domain(s) IPR005061 Protein of unknown function DUF292, eukaryoticCoding geneHOM000293 ORTHO143309
X MT7G098550Cytochrome P450 (AHRD V1 ***- B9MZU2_POPTR); contains Interpro domain(s) IPR002401 Cytochrome P450, E-class, group ICoding geneHOM000078 ORTHO004331
X MT7G098560Unknown Protein (AHRD V1)Coding geneHOM000228 ORTHO179987
V MT7G098570F-box/FBD/LRR-repeat protein At3g52680 (AHRD V1 ***- Q9LXJ6); contains Interpro domain(s) IPR013596 FBDCoding geneHOM000115 ORTHO002091
X MT7TE098580rna_type=pre-trna;Serine/threonine-protein phosphatase 7 long form homolog (AHRD V1 *-*- Q9LNG5); contains Interpro domain(s) IPR019557 Aminotransferase-like, plant mobile domainTransposon
V MT7G098590F-box/LRR-repeat protein At4g14103 (AHRD V1 ***- Q8L7H1); contains Interpro domain(s) IPR001810 Cyclin-like F-boxCoding geneHOM000115 ORTHO002091
X MT7TE098600rna_type=pre-trna;Unknown Protein (AHRD V1); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT7G098610Receptor-like protein kinase 2 (AHRD V1 ***- Q9LHP4); contains Interpro domain(s) IPR002290 Serine/threonine protein kinaseCoding geneHOM000002 ORTHO000048
X MT7G098620Unknown Protein (AHRD V1)Coding geneHOM000140 ORTHO000010
X MT7G098630Subtilisin-like protease (AHRD V1 ***- O65351); contains Interpro domain(s) IPR015500 Peptidase S8, subtilisin-relatedCoding geneHOM000020 ORTHO009112
X MT7G098640Unknown Protein (AHRD V1)Coding genesingleton
V MT7G098650Xyloglucan galactosyltransferase KATAMARI1 (AHRD V1 ***- Q7XJ98); contains Interpro domain(s) IPR004263 Exostosin-likeCoding geneHOM000323 ORTHO005045
X MT7TE098660rna_type=pre-trna;Uncharacterized mitochondrial protein AtMg00310 (AHRD V1 *-*- P93295); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT7TE098670rna_type=pre-trna;T10F20.23 protein (Fragment) (AHRD V1 *-*- Q9LMR6_ARATH); contains Interpro domain(s) IPR008906 HAT dimerisationTransposon
X MT7G098680Unknown Protein (AHRD V1)Coding geneHOM007988 ORTHO016873
V MT7G098690ABC transporter C family member 5 (AHRD V1 ***- Q7GB25); contains Interpro domain(s) IPR001140 ABC transporter, transmembrane regionCoding geneHOM000121 ORTHO000006
X MT7G098700Tyrosine decarboxylase 1 (AHRD V1 **** Q8RY79); contains Interpro domain(s) IPR010977 Aromatic-L-amino-acid decarboxylaseCoding geneHOM000869 ORTHO003866
X MT7TE098710rna_type=pre-trna;Transposase-like protein (AHRD V1 *-*- Q6RZV0_MUSAC); contains Interpro domain(s) IPR008906 HAT dimerisationTransposon
X MT7G098720Unknown Protein (AHRD V1)Coding geneHOM005382 ORTHO083734
X MT7G098730Tyrosine decarboxylase 1 (AHRD V1 **** Q8RY79); contains Interpro domain(s) IPR010977 Aromatic-L-amino-acid decarboxylaseCoding geneHOM000869 ORTHO003866
V MT7G098740Pleiotropic drug resistance protein 1 (AHRD V1 ***- Q76CU2); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO000005
V MT7G098750Pleiotropic drug resistance protein 1 (AHRD V1 ***- Q76CU2); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO000005
V MT7G098760Pleiotropic drug resistance protein (AHRD V1 *-*- B9H0A7_POPTR); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO000005
X MT7G098770Unknown Protein (AHRD V1)Coding genesingleton
V MT7G098780Pleiotropic drug resistance protein (AHRD V1 ***- C8CA13_CUCSA); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO000005
X MT7G098790Pleiotropic drug resistance protein (AHRD V1 *-*- C8CA13_CUCSA)Coding geneHOM000033 ORTHO215136
V MT7G098800Pleiotropic drug resistance protein (AHRD V1 ***- C8CA13_CUCSA); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO000005
X MT7G098810Unknown Protein (AHRD V1)Coding geneHOM001853 ORTHO001229
X MT7G098820Unknown Protein (AHRD V1)Coding geneHOM001762 ORTHO059425
X MT7G098830Unknown Protein (AHRD V1)Coding geneHOM008563 ORTHO018525
X MT7G098840Eukaryotic translation initiation factor 3 subunit A (AHRD V1 *-*- Q9LD55)Coding geneHOM002868 ORTHO268799
X MT7G098850Unknown Protein (AHRD V1)Coding geneHOM001853 ORTHO195555
X MT7G098860Extra response regulator (AHRD V1 ***- B9GR96_POPTR); contains Interpro domain(s) IPR001789 Signal transduction response regulator, receiver regionCoding geneHOM001844 ORTHO204740
X MT7G098870B3 domain-containing protein At3g25182 (AHRD V1 *-*- Q9LSF7); contains Interpro domain(s) IPR005508 Protein of unknown function DUF313Coding geneHOM010190 ORTHO012853
X MT7G098880Unknown Protein (AHRD V1)Coding genesingleton
V MT7G098890Pleiotropic drug resistance protein (AHRD V1 ***- C8CA13_CUCSA); contains Interpro domain(s) IPR013525 ABC-2 type transporterCoding geneHOM000033 ORTHO000005
X MT7G098900WD repeat-containing protein 70 (AHRD V1 ***- Q5EB92); contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat, regionCoding geneHOM004697 ORTHO005729
X MT7G098910Chemotaxis protein cheY homolog (AHRD V1 **-- A1W0A5); contains Interpro domain(s) IPR001789 Signal transduction response regulator, receiver regionCoding geneHOM001844 ORTHO014244
X MT7G098920Unknown Protein (AHRD V1)Coding geneHOM000753 ORTHO158797
V MT7G098930Ammonium transporter 1 member 4 (AHRD V1 **** Q9SVT8); contains Interpro domain(s) IPR001905 Ammonium transporterCoding geneHOM000919 ORTHO000263