Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_fve_64
Cluster type
GO
Species
Fragaria vesca
Chromosome
LG4
E-value
0.00060432
GO label
GO:0044464
GO description
cell part
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM0000044137166224
HOM0000082766203121
HOM000031162071122
HOM000033148950225
HOM000034141265125
HOM000044125440125
HOM00007188539825
HOM00007585228120
HOM00013153219120
HOM00013353127121
HOM00015247217223
HOM00019338720123
HOM00025531611125
HOM00028129319124
HOM0004882007125
HOM00064216111116
HOM0007981365125
HOM0009601174125
HOM00098211516125
HOM0010401088122
HOM001147995125
HOM001151994120
HOM001314884125
HOM00133188216
HOM001485795125
HOM001514772125
HOM001568754222
HOM001767682125
HOM001835672125
HOM002019612125
HOM002389542125
HOM002678483120
HOM002750471125
HOM003269402219
HOM003536371125
HOM003570371125
HOM004018341124
HOM004149331123
HOM004333321122
HOM004425322123
HOM005122281125
HOM006085231119
HOM0293962211

Gene information

In cluster Gene id Description Gene type Gene family
V FV4G17870Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 (Su(var)3-9 homolog protein 4) (similar to)Coding geneHOM000281 ORTHO020207
V FV4G17880Cation/calcium exchanger 3 (AtCCX3) (probable)Coding geneHOM000255 ORTHO183427
X FV4G17890U11/U12 small nuclear ribonucleoprotein 35 kDa protein (U11/U12 snRNP 35 kDa protein) (probable)Coding geneHOM006228 ORTHO007936
X FV4G17900Acyl-CoA desaturase 1 (probable)Coding geneHOM000182 ORTHO164371
V FV4G17910Cysteine proteinase inhibitor 4 (OC-IV), Precursor (similar to)Coding geneHOM000488 ORTHO003688
V FV4G17920DNA topoisomerase 6 subunit A (AtTOP6A) (probable)Coding geneHOM000982 ORTHO052015
X FV4G17930Kinesin-like protein KIF15 (probable)Coding geneHOM000030 ORTHO001995
X FV4G17940Nuclear envelope pore membrane protein POM 121C (POM121-2) (probable)Coding genesingleton
V FV4G17950Transcription factor bHLH78 (bHLH 78) (probable)Coding geneHOM000075 ORTHO012209
X FV4G17960Hormone receptor 4 (probable)Coding genesingleton
X FV4G17970Mediator of RNA polymerase II transcription subunit 1.1 (probable)Coding geneHOM001385 ORTHO000071
X FV4G17980Monofunctional biosynthetic peptidoglycan transglycosylase (Monofunctional TGase) (similar to)Coding genesingleton
V FV4G17990DNA topoisomerase 3-beta-1 (probable)Coding geneHOM001835 ORTHO004433
X FV4G18000Probable disease resistance protein At5g45510Coding geneHOM000052 ORTHO034352
V FV4G18010Phytoene dehydrogenase, chloroplastic/chromoplastic, Precursor (putative)Coding geneHOM003536 ORTHO003192
X FV4G18020Brain-specific homeobox protein homolog (probable)Coding geneHOM016641 ORTHO052058
V FV4G18030Coatomer subunit beta-1 (Beta-COP 1) (putative)Coding geneHOM001514 ORTHO000852
X FV4G18040Piwi-like protein 4 (probable)Coding geneHOM020697 ORTHO078303
X FV4G18050hypothetical proteinCoding genesingleton
X FV4G18060Probable glutathione S-transferaseCoding geneHOM000077 ORTHO011674
V FV4G18070GPN-loop GTPase 1 homolog (similar to)Coding geneHOM003570 ORTHO003173
X FV4G18080Protein proQ homolog (probable)Coding geneHOM009182 ORTHO018206
X FV4G18090Arginine/serine-rich coiled-coil protein 2 (probable)Coding geneHOM007379 ORTHO016187
X FV4G18100ABC transporter C family member 1 (probable)Coding geneHOM004545 ORTHO003677
X FV4G18110Lectin-B, Precursor (probable)Coding geneHOM004545 ORTHO003677
X FV4G18120Regulator of nonsense transcripts 2 (hUpf2) (probable)Coding geneHOM003362 ORTHO003072
V FV4G18130Pre-mRNA-splicing factor ISY1 homolog (probable)Coding geneHOM004018 ORTHO005009
V FV4G1814060S acidic ribosomal protein P2 (similar to)Coding geneHOM001040 ORTHO034362
X FV4G18150Cysteine proteinase inhibitor 5 (AtCYS-5), Precursor (probable)Coding genesingleton
X FV4G18160Fruit bromelain, Precursor (probable)Coding geneHOM000058 ORTHO161310
X FV4G18170Putative F-box protein At3g17490 (probable)Coding geneHOM000048 ORTHO052167
V FV4G1818040S ribosomal protein S1 (probable)Coding geneHOM005122 ORTHO004390
V FV4G1819050S ribosomal protein L27 (similar to)Coding geneHOM001147 ORTHO002788
V FV4G18200UPF0463 transmembrane protein C6orf35 homolog (probable)Coding geneHOM001331 ORTHO025919
V FV4G18210Thyroid receptor-interacting protein 11 (TRIP-11) (probable)Coding geneHOM029396 ORTHO255118
X FV4G18220Pentatricopeptide repeat-containing protein At4g33170 (probable)Coding geneHOM000001 ORTHO013782
X FV4G18230Probable amino-acid ABC transporter permease protein patM (similar to)Coding geneHOM006244 ORTHO052183
X FV4G18240GTP-binding protein engA (probable)Coding geneHOM029010 ORTHO052196
X FV4G18250Complement component C6, Precursor (probable)Coding geneHOM000539 ORTHO009028
V FV4G18260Rho GDP-dissociation inhibitor 1 (Rho GDI-1) (probable)Coding geneHOM001151 ORTHO014432
X FV4G18270Phosphoglucan, water dikinase, chloroplastic, Precursor (putative)Coding geneHOM003401 ORTHO001882
X FV4G18280Lipoma HMGIC fusion partner-like 1 protein, Precursor (probable)Coding genesingleton
X FV4G18290Zinc finger CCCH domain-containing protein 44 (AtC3H44) (probable)Coding geneHOM000707 ORTHO051528
X FV4G18300Zinc finger BED domain-containing protein 4 (probable)Coding geneHOM000148 ORTHO051855
X FV4G18310Histone-lysine N-methyltransferase ASHR2 (putative)Coding geneHOM004846 ORTHO005718
V FV4G18320Eukaryotic peptide chain release factor subunit 1-3 (Eukaryotic release factor 1-3) (similar to)Coding geneHOM001314 ORTHO000392
V FV4G18330U2 small nuclear ribonucleoprotein A' (U2 snRNP-A') (similar to)Coding geneHOM000798 ORTHO003285
X FV4G18340Hsp70 nucleotide exchange factor fes1 (probable)Coding geneHOM004315 ORTHO007976
V FV4G18350Protein disulfide-isomerase 1 (PDI1), Precursor (probable)Coding geneHOM002678 ORTHO009656
V FV4G18360N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (probable)Coding geneHOM004425 ORTHO003127
X FV4G183701-phosphatidylinositol phosphodiesterase (PI-PLC), Precursor (probable)Coding geneHOM003257 ORTHO004596
X FV4G18380Vegetative cell wall protein gp1, Precursor (probable)Coding geneHOM001811 ORTHO015428
V FV4G18390Gut esterase 1, Precursor (probable)Coding geneHOM002389 ORTHO005357
V FV4G18400Exostosin-1b (probable)Coding geneHOM000193 ORTHO018234
X FV4G18410Postacrosomal sheath WW domain-binding protein (probable)Coding geneHOM005827 ORTHO007324
X FV4G18420Stem bromelain (probable)Coding geneHOM000058 ORTHO109794
V FV4G18430TMV resistance protein N (similar to)Coding geneHOM000008 ORTHO020210
X FV4G18440TMV resistance protein N (probable)Coding geneHOM000008 ORTHO226421
V FV4G18450K(+)/H(+) antiporter 13 (AtCHX13) (probable)Coding geneHOM000133 ORTHO000084
V FV4G18460DEAD-box ATP-dependent RNA helicase 50 (similar to)Coding geneHOM004149 ORTHO006399
V FV4G18470Ubiquitin carboxyl-terminal hydrolase 13 (AtUBP13) (probable)Coding geneHOM000642 ORTHO034052
V FV4G18480Uncharacterized protein At3g17611 (similar to)Coding geneHOM004333 ORTHO003838
X FV4G18490Ribonuclease HIII (RNase HIII) (probable)Coding genesingleton
X FV4G18500F-box/kelch-repeat protein At1g16250 (similar to)Coding geneHOM000449 ORTHO015787
X FV4G18510GPI ethanolamine phosphate transferase 3 (PIG-O) (probable)Coding geneHOM003934 ORTHO002793
V FV4G18520Peptide transporter PTR5 (probable)Coding geneHOM000031 ORTHO002793
X FV4G18530Protein notum homolog, Precursor (probable)Coding geneHOM000436 ORTHO020232
X FV4G18540Transcription factor HY5-like (similar to)Coding geneHOM002310 ORTHO013551
X FV4G18550ETS translocation variant 3 (PE-1) (probable)Coding genesingleton
X FV4G18560Immediate-early protein (probable)Coding geneHOM010934 ORTHO107422
V FV4G18570Auxin-responsive protein IAA31 (similar to)Coding geneHOM000131 ORTHO001991
V FV4G18580Chromatin structure-remodeling complex protein BSH (AtBSH) (putative)Coding geneHOM006085 ORTHO008540
X FV4G18590Protein phosphatase methylesterase 1 (PME-1) (similar to)Coding geneHOM004651 ORTHO005572
X FV4G18600Zinc transporter ZIP6 (ZIP-6), Precursor (probable)Coding geneHOM004556 ORTHO007785
X FV4G18610Dihydroorotase (DHOase) (probable)Coding geneHOM009607 ORTHO018125
V FV4G18620Putative esterase VC_A0580 (probable)Coding geneHOM003269 ORTHO003332
X FV4G18630Midasin (probable)Coding geneHOM009058 ORTHO017061
V FV4G18640Esterase ydiI (probable)Coding geneHOM003269 ORTHO003332
X FV4G18650Aspartic proteinase oryzasin-1, Precursor (probable)Coding geneHOM000862 ORTHO013865
X FV4G18660Chorismate synthase, chloroplastic, Precursor (similar to)Coding geneHOM003301 ORTHO134852
X FV4G18670Chorismate synthase 1, chloroplastic, Precursor (probable)Coding geneHOM003301 ORTHO242595
X FV4G18680Zinc finger Ran-binding domain-containing protein 3 (probable)Coding geneHOM000101 ORTHO005571
V FV4G18690Putative prolyl-tRNA synthetase C19C7.06 (ProRS) (similar to)Coding geneHOM001485 ORTHO001706
X FV4G18700Stress response protein nst1 (probable)Coding geneHOM005975 ORTHO260879
X FV4G18710Putative ribonuclease H protein At1g65750 (probable)Coding geneHOM009970 ORTHO034166
X FV4G18720Protein unc-80 (probable)Coding geneHOM005975 ORTHO009191
X FV4G18730Protein CHUP1, chloroplastic (similar to)Coding geneHOM000174 ORTHO011233
V FV4G18740ABC transporter B family member 11 (ABC transporter ABCB.11) (similar to)Coding geneHOM000071 ORTHO156808
V FV4G18750ABC transporter B family member 4 (ABC transporter ABCB.4) (similar to)Coding geneHOM000071 ORTHO084579
X FV4G18760Intraflagellar transport protein 88 homolog (TPR repeat protein 10) (probable)Coding geneHOM025286 ORTHO186184
V FV4G18770ABC transporter B family member 11 (ABC transporter ABCB.11) (putative)Coding geneHOM000071 ORTHO000089
V FV4G18780ABC transporter B family member 5 (ABC transporter ABCB.5) (putative)Coding geneHOM000071 ORTHO000089
V FV4G18790ABC transporter B family member 4 (ABC transporter ABCB.4) (putative)Coding geneHOM000071 ORTHO000089
V FV4G18800Cytosolic purine 5'-nucleotidase (probable)Coding geneHOM001568 ORTHO006050
V FV4G18810Peptide chain release factor 3 (RF-3) (probable)Coding geneHOM001568 ORTHO010690
X FV4G18820tRNA pseudouridine synthase A 1 (probable)Coding geneHOM003861 ORTHO005666
X FV4G18830Protein FAR1-RELATED SEQUENCE 4 (probable)Coding geneHOM000095 ORTHO008254
X FV4G18840Late embryogenesis abundant protein D-29 (LEA D-29) (probable)Coding geneHOM008887 ORTHO204351
V FV4G18850CBL-interacting serine/threonine-protein kinase 1 (putative)Coding geneHOM000044 ORTHO003763
X FV4G18860F-box protein At2g26160 (probable)Coding geneHOM000894 ORTHO134150
V FV4G18870Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase) (probable)Coding geneHOM000960 ORTHO005003
V FV4G1888050S ribosomal protein L3-2, chloroplastic, Precursor (similar to)Coding geneHOM002019 ORTHO003017
X FV4G18890Pre-rRNA-processing protein esf2 (probable)Coding geneHOM006169 ORTHO015422
V FV4G18900Pectinesterase 28 (PE 28) (probable)Coding geneHOM000034 ORTHO001300
X FV4G18910Deoxynucleotidyltransferase terminal-interacting protein 2 (probable)Coding geneHOM000148 ORTHO012955
V FV4G18920[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial (Pyruvate dehydrogenase kinase), Precursor (probable)Coding geneHOM002750 ORTHO001441
V FV4G18930Novel plant SNARE 13 (AtNPSN13) (putative)Coding geneHOM001767 ORTHO001660
X FV4G18940Solute carrier family 35 member C2 (probable)Coding geneHOM000656 ORTHO008539
V FV4G18950Probable receptor-like protein kinase At2g42960 (putative)Coding geneHOM000004 ORTHO000248
V FV4G18960Probable receptor-like protein kinase At2g47060 (similar to)Coding geneHOM000004 ORTHO015828
X FV4G18970PERQ amino acid-rich with GYF domain-containing protein 2 (similar to)Coding genesingleton
X FV4G18980Transmembrane protein, Precursor (probable)Coding geneHOM000026 ORTHO009780
X FV4G18990Endonuclease (probable)Coding geneHOM000026 ORTHO209588
X FV4G19000hypothetical proteinCoding genesingleton
V FV4G19010Squamosa promoter-binding-like protein 12 (probable)Coding geneHOM000152 ORTHO000953
V FV4G19020Squamosa promoter-binding-like protein 1 (probable)Coding geneHOM000152 ORTHO000953
X FV4G19030Pentatricopeptide repeat-containing protein At3g06430, chloroplastic, Precursor (similar to)Coding geneHOM000003 ORTHO008509
V FV4G19040Pleiotropic drug resistance protein 3 (similar to)Coding geneHOM000033 ORTHO047642
V FV4G19050ABC transporter B family member 11 (ABC transporter ABCB.11) (putative)Coding geneHOM000071 ORTHO000089
V FV4G19060ABC transporter B family member 11 (ABC transporter ABCB.11) (putative)Coding geneHOM000071 ORTHO000089
V FV4G19070ABC transporter B family member 4 (ABC transporter ABCB.4) (similar to)Coding geneHOM000071 ORTHO175336
V FV4G19080Pleiotropic drug resistance protein 3 (similar to)Coding geneHOM000033 ORTHO000005