Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_mtr_282
Cluster type
GO
Species
Medicago truncatula
Chromosome
1
E-value
0.0000566195
GO label
GO:0006355
GO description
regulation of cellular transcription, DNA-dependent
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM00007486133121
HOM00019138938525

Gene information

In cluster Gene id Description Gene type Gene family
V MT1G104930Paired amphipathic helix protein Sin3 (AHRD V1 *--- O48686); contains Interpro domain(s) IPR003822 Paired amphipathic helixCoding geneHOM000074 ORTHO016918
V MT1G104940SIN3 component histone deacetylase complex (AHRD V1 ***- B9HU88_POPTR); contains Interpro domain(s) IPR003822 Paired amphipathic helixCoding geneHOM000191 ORTHO180428
V MT1G104950SIN3 component histone deacetylase complex (AHRD V1 ***- B9HU88_POPTR); contains Interpro domain(s) IPR003822 Paired amphipathic helixCoding geneHOM000191 ORTHO232610
V MT1G104960Paired amphipathic helix protein Sin3b (AHRD V1 ***- O75182); contains Interpro domain(s) IPR003822 Paired amphipathic helixCoding geneHOM000191 ORTHO024950
X MT1G104970Unknown Protein (AHRD V1)Coding genesingleton
V MT1G104980Paired amphipathic helix protein Sin3 (AHRD V1 ***- O48686); contains Interpro domain(s) IPR003822 Paired amphipathic helixCoding geneHOM000191 ORTHO024950
X MT1G104990Unknown Protein (AHRD V1)Coding genesingleton
X MT1TE105000rna_type=pre-trna;LINE-type retrotransposon LIb DNA complete sequence Insertion at the S14 site (AHRD V1 ***- Q2HX37_IPOBA)Transposon
V MT1G105010Paired amphipathic helix protein Sin3 (AHRD V1 ***- O48686); contains Interpro domain(s) IPR003822 Paired amphipathic helixCoding geneHOM000191 ORTHO088660