Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_mtr_258
Cluster type
GO
Species
Medicago truncatula
Chromosome
2
E-value
0.0000338533
GO label
GO:0010447
GO description
response to acidity
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM000031162084322

Gene information

In cluster Gene id Description Gene type Gene family
V MT2G093160Nitrate/chlorate transporter (AHRD V1 **** Q05085); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO001584
X MT2G093170Unknown Protein (AHRD V1)Coding genesingleton
V MT2G093180Nitrate/chlorate transporter (AHRD V1 **** Q05085); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO001584
X MT2G093190MADS-box transcription factor (Fragment) (AHRD V1 *-*- Q2N2S0_FESPR); contains Interpro domain(s) IPR002100 Transcription factor, MADS-boxCoding geneHOM000039 ORTHO000242
X MT2G093200DDB1- and CUL4-associated factor 8 (AHRD V1 ***- Q8N7N5); contains Interpro domain(s) IPR017986 WD40 repeat, regionCoding geneHOM002081 ORTHO011981
X MT2G093210V-type proton ATPase 116 kDa subunit a isoform 1 (AHRD V1 **** Q8AVM5); contains Interpro domain(s) IPR002490 ATPase, V0/A0 complex, 116-kDa subunitCoding geneHOM001218 ORTHO000258
X MT2G093220Dof zinc finger protein 2 (AHRD V1 *-*- A5HWF1_HORVD); contains Interpro domain(s) IPR003851 Zinc finger, Dof-typeCoding geneHOM000099 ORTHO011936
X MT2G093230Unknown Protein (AHRD V1)Coding geneHOM003616 ORTHO004684
X MT2G093240Interactor of constitutive active ROPs 3 (AHRD V1 ***- Q9LSS5)Coding geneHOM000873 ORTHO124549
X MT2G093250Interactor of constitutive active ROPs 2, chloroplastic (AHRD V1 *-*- Q9ZQC5)Coding geneHOM000873 ORTHO241513
X MT2G093260Interactor of constitutive active ROPs 3 (AHRD V1 ***- Q9LSS5)Coding geneHOM000873 ORTHO195761
X MT2G093270Unknown Protein (AHRD V1)Coding genesingleton
X MT2G093280Carbamoyl-phosphate synthase large chain (AHRD V1 **** Q8YQL2); contains Interpro domain(s) IPR006275 Carbamoyl phosphate synthase, large subunit, glutamine-dependentCoding geneHOM003904 ORTHO003318
X MT2G093290Unknown Protein (AHRD V1)Coding genesingleton
X MT2G093300Unknown Protein (AHRD V1)Coding genesingleton
X MT2G093310LOB domain protein 11 (AHRD V1 ***- B6SMH2_MAIZE); contains Interpro domain(s) IPR004883 Lateral organ boundaries, LOBCoding geneHOM000098 ORTHO004800
X MT2TE093320rna_type=pre-trna;Protein FAR1-RELATED SEQUENCE 5 (AHRD V1 *-*- Q9SZL8); contains Interpro domain(s) IPR018289 MULE transposase, conserved domainTransposon
X MT2G093330Unknown Protein (AHRD V1)Coding geneHOM000559 ORTHO000041
X MT2G093340Unknown Protein (AHRD V1)Coding geneHOM000484 ORTHO000027
X MT2G093350Vicilin-like antimicrobial peptides 2-3 (Fragment) (AHRD V1 **-- Q9SPL3); contains Interpro domain(s) IPR006045 Cupin 1Coding geneHOM001970 ORTHO003057
X MT2G093360Unknown Protein (AHRD V1)Coding genesingleton
X MT2G093370Unknown Protein (AHRD V1)Coding geneHOM008132 ORTHO010521
X MT2G093380Unknown Protein (AHRD V1)Coding genesingleton
X MT2G093390Vicilin-like antimicrobial peptides 2-3 (Fragment) (AHRD V1 **-- Q9SPL3); contains Interpro domain(s) IPR006045 Cupin 1Coding geneHOM001970 ORTHO003057
X MT2TE093400rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT2G093410Vicilin-like antimicrobial peptides 2-3 (Fragment) (AHRD V1 **-- Q9SPL3); contains Interpro domain(s) IPR006045 Cupin 1Coding geneHOM001970 ORTHO003057
X MT2TE093420rna_type=pre-trna;Uncharacterized mitochondrial protein AtMg00310 (AHRD V1 *-*- P93295); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT2G093430Unknown Protein (AHRD V1); contains Interpro domain(s) IPR000010 Proteinase inhibitor I25, cystatinCoding geneHOM012178 ORTHO024974
X MT2G093440Unknown Protein (AHRD V1)Coding geneHOM014991 ORTHO037902
X MT2TE093450rna_type=pre-trna;LINE-1 reverse transcriptase homolog (AHRD V1 *--- P08548); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT2G093460Unknown Protein (AHRD V1)Coding geneHOM014991 ORTHO037902
X MT2TE093470rna_type=pre-trna;LINE-1 reverse transcriptase homolog (AHRD V1 *-*- P08548); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT2G093480Unknown Protein (AHRD V1)Coding geneHOM014991 ORTHO037902
X MT2TE093490rna_type=pre-trna;Endonuclease/reverse transcriptase (AHRD V1 *-*- A5Z0F6_PIG); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT2G093500Protein disulfide isomerase L-3b (AHRD V1 ***- C6KXH6_SOYBN); contains Interpro domain(s) IPR013766 Thioredoxin domainCoding geneHOM000784 ORTHO240519
X MT2G093510Pre-mRNA-processing-splicing factor 8 (AHRD V1 ***- B0XAY2_CULQU); contains Interpro domain(s) IPR019581 Pre-mRNA-processing-splicing factor 8, U5-snRNA bindingCoding geneHOM002298 ORTHO001343
X MT2G093520Vicilin-like antimicrobial peptides 2-3 (Fragment) (AHRD V1 **-- Q9SPL3); contains Interpro domain(s) IPR014710 RmlC-like jelly roll foldCoding geneHOM001970 ORTHO103313
X MT2TE093530rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT2TE093540rna_type=pre-trna;Gag/pol polyprotein (AHRD V1 ***- Q6WAY3_PEA); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT2G093550Vicilin-like antimicrobial peptides 2-2 (AHRD V1 **-- Q9SPL4); contains Interpro domain(s) IPR006045 Cupin 1Coding geneHOM001970 ORTHO242116
X MT2G093560Unknown Protein (AHRD V1)Coding geneHOM000004 ORTHO137230
X MT2G093570Beta-D-galactosidase (AHRD V1 *-*- C3TMY4_ECOLX)Coding geneHOM007112 ORTHO059113
X MT2G093580Unknown Protein (AHRD V1)Coding genesingleton
X MT2G093590Vicilin-like antimicrobial peptides 2-2 (AHRD V1 **-- Q9SPL4); contains Interpro domain(s) IPR006045 Cupin 1Coding geneHOM001970 ORTHO003057
X MT2G093600Unknown Protein (AHRD V1)Coding geneHOM023201 ORTHO059114
X MT2G093610Unknown Protein (AHRD V1)Coding geneHOM000273 ORTHO228144
X MT2G093620Vicilin-like antimicrobial peptides 2-3 (Fragment) (AHRD V1 **-- Q9SPL3); contains Interpro domain(s) IPR006045 Cupin 1Coding geneHOM001970 ORTHO003057
X MT2G093630Vicilin-like antimicrobial peptides 2-2 (AHRD V1 *--- Q9SPL4); contains Interpro domain(s) IPR006045 Cupin 1Coding geneHOM001970 ORTHO163450
V MT2G093640Peptide transporter PTR1 (AHRD V1 **** Q9M390); contains Interpro domain(s) IPR000109 TGF-beta receptor, type I/II extracellular regionCoding geneHOM000031 ORTHO001584