Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_mtr_199
Cluster type
GO
Species
Medicago truncatula
Chromosome
3
E-value
0.00000226055
GO label
GO:0006915
GO description
apoptosis
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM0000082766422121
HOM00000925952821121

Gene information

In cluster Gene id Description Gene type Gene family
V MT3G022060Cc-nbs-lrr resistance protein (Fragment) (AHRD V1 ***- B9GLY8_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G022070Unknown Protein (AHRD V1)Coding geneHOM024811 ORTHO059169
X MT3G022080Unknown Protein (AHRD V1)Coding geneHOM014157 ORTHO029398
X MT3G022090Cellular nucleic acid-binding protein (AHRD V1 *-*- P62634); contains Interpro domain(s) IPR013084 Zinc finger, CCHC retroviral-typeCoding geneHOM001339 ORTHO058510
X MT3G022100Unknown Protein (AHRD V1)Coding geneHOM000484 ORTHO000027
X MT3TE022110rna_type=pre-trna;Very similar to retrotransposon reverse transcriptase (AHRD V1 ***- Q9SK98_ARATH); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3G022120Unknown Protein (AHRD V1)Coding genesingleton
V MT3G022130Cc-nbs resistance protein (Fragment) (AHRD V1 *-*- B9NH38_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G022140Unknown Protein (AHRD V1)Coding geneHOM019704 ORTHO059170
X MT3G022150Unknown Protein (AHRD V1)Coding geneHOM006436 ORTHO037921
X MT3TE022160rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 **-- P10978); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3TE022170rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE022180rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE022190rna_type=pre-trna;Protein FAR-RED IMPAIRED RESPONSE 1 (AHRD V1 --*- Q9SWG3); contains Interpro domain(s) IPR018289 MULE transposase, conserved domainTransposon
X MT3G022200Unknown Protein (AHRD V1)Coding geneHOM028705 ORTHO059171
X MT3G022210Unknown Protein (AHRD V1)Coding geneHOM016364 ORTHO277861
X MT3G022220Unknown Protein (AHRD V1)Coding geneHOM021123 ORTHO059172
V MT3G022230Cc-nbs-lrr resistance protein (Fragment) (AHRD V1 **-- B9GLY8_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G022240TIR-NBS-LRR type disease resistance protein (AHRD V1 ***- Q19PJ5_POPTR)Coding geneHOM000009 ORTHO024983
X MT3G022250Unknown Protein (AHRD V1)Coding geneHOM015008 ORTHO037922
X MT3G022260Cc-nbs-lrr resistance protein (AHRD V1 ***- B9GWM3_POPTR)Coding geneHOM000009 ORTHO059173
X MT3TE022270rna_type=pre-trna;Gag/pol polyprotein (AHRD V1 ***- Q6WAY3_PEA); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3TE022280rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE022290rna_type=pre-trna;Retrotransposable element Tf2 155 kDa protein type 3 (AHRD V1 *--- Q9UR07); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
V MT3G022300Cc-nbs-lrr resistance protein (AHRD V1 ***- B9NDE2_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G022310Unknown Protein (AHRD V1)Coding genesingleton
X MT3G022320ORF1 (Fragment) (AHRD V1 ***- D0E2V6_PEA)Coding geneHOM001423 ORTHO008313
X MT3TE022330rna_type=pre-trna;Gag/pol polyprotein (AHRD V1 ***- Q6WAY3_PEA); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3G022340Unknown Protein (AHRD V1)Coding geneHOM013453 ORTHO029282
X MT3G022350Unknown Protein (AHRD V1)Coding genesingleton
X MT3TE022360rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3G022370Unknown Protein (AHRD V1)Coding geneHOM004943 ORTHO179102
X MT3G022380Unknown Protein (AHRD V1)Coding geneHOM000203 ORTHO014499
X MT3G022390Unknown Protein (AHRD V1)Coding geneHOM000659 ORTHO190247
V MT3G022400NBS resistance protein (Fragment) (AHRD V1 *-*- B9P8V0_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G022410GRAS family transcription factor (AHRD V1 *--- B9GWK5_POPTR); contains Interpro domain(s) IPR005202 GRAS transcription factorCoding geneHOM001339 ORTHO012798
X MT3TE022420rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE022430rna_type=pre-trna;Polyprotein (AHRD V1 **-- Q9XEM5_ORYSI); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3TE022440rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE022450rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE022550rna_type=pre-trna;Polyprotein (AHRD V1 ***- Q9XE85_SORBI); contains Interpro domain(s) IPR012337 Polynucleotidyl transferase, ribonuclease H foldTransposon
X MT3TE022560rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 ***- P10978); contains Interpro domain(s) IPR001878 Zinc finger, CCHC-typeTransposon
V MT3G022570Cc-nbs resistance protein (Fragment) (AHRD V1 *-*- B9NH38_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G022580GRAS family transcription factor (AHRD V1 ***- B9GM40_POPTR); contains Interpro domain(s) IPR005202 GRAS transcription factorCoding geneHOM000042 ORTHO059168
X MT3G022590Cc-nbs-lrr resistance protein (AHRD V1 ***- B9GWM3_POPTR)Coding geneHOM000009 ORTHO024983
V MT3G022600NBS-LRR disease resistance-like protein (Fragment) (AHRD V1 *-*- Q2LEF3_9ROSI); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3G022610Unknown Protein (AHRD V1)Coding geneHOM021123 ORTHO059172
X MT3TE022620rna_type=pre-trna;Protein FAR1-RELATED SEQUENCE 5 (AHRD V1 *-*- Q9SZL8); contains Interpro domain(s) IPR018289 MULE transposase, conserved domainTransposon
X MT3TE022630rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE022640rna_type=pre-trna;Uncharacterized mitochondrial protein AtMg00310 (AHRD V1 *-*- P93295); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3G022650Unknown Protein (AHRD V1)Coding geneHOM000484 ORTHO000027
X MT3G022660Unknown Protein (AHRD V1)Coding geneHOM014157 ORTHO029398
X MT3G022670Unknown Protein (AHRD V1)Coding geneHOM024811 ORTHO059169
X MT3G022680Unknown Protein (AHRD V1)Coding geneHOM007099 ORTHO011736
X MT3TE022690rna_type=pre-trna;Pol polyprotein (AHRD V1 *-*- P26810); contains Interpro domain(s) IPR001584 Integrase, catalytic coreTransposon
X MT3G022700GDSL esterase/lipase At2g03980 (AHRD V1 -**- Q9SIF5)Coding geneHOM000029 ORTHO216876
X MT3TE022710rna_type=pre-trna;Serine/threonine-protein phosphatase 7 long form homolog (AHRD V1 ***- Q9LNG5); contains Interpro domain(s) IPR019557 Aminotransferase-like, plant mobile domainTransposon
X MT3TE022720rna_type=pre-trna;Reverse transcriptase family member (AHRD V1 ***- Q1AKH8_SOYBN)Transposon
X MT3G022730Cc-nbs-lrr resistance protein (AHRD V1 *-*- B9GWM3_POPTR)Coding geneHOM000009 ORTHO024983
X MT3G022740CC-NBS-LRR (AHRD V1 *--- Q69AB3_HELAN); contains Interpro domain(s) IPR001611 Leucine-rich repeatCoding geneHOM000009 ORTHO126985
X MT3G022750Unknown Protein (AHRD V1)Coding genesingleton
X MT3G022760Unknown Protein (AHRD V1)Coding genesingleton
X MT3TE022770rna_type=pre-trna;Unknown Protein (AHRD V1)Transposon
X MT3TE022780rna_type=pre-trna;Reverse transcriptase (Fragment) (AHRD V1 *--- O23757_BETVU); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
V MT3G022790NBS resistance protein (Fragment) (AHRD V1 *-*- B9GWK6_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE022800rna_type=pre-trna;Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V1 **-- P10978); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G022810Cc-nbs-lrr resistance protein (AHRD V1 *-*- B9GGX8_POPTR)Coding geneHOM000009 ORTHO082593
X MT3TE022820rna_type=pre-trna;Transposon Ty1-BR Gag-Pol polyprotein (AHRD V1 *-*- Q12193); contains Interpro domain(s) IPR013103 Reverse transcriptase, RNA-dependent DNA polymeraseTransposon
X MT3G022830GRAS family transcription factor (AHRD V1 **-- B9GM40_POPTR); contains Interpro domain(s) IPR005202 GRAS transcription factorCoding geneHOM000042 ORTHO028094
X MT3TE022840rna_type=pre-trna;Uncharacterized mitochondrial protein AtMg00310 (AHRD V1 *-*- P93295); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3G022850Crossover junction endonuclease MUS81 (AHRD V1 *-*- Q6CPQ8); contains Interpro domain(s) IPR006166 DNA repair nuclease, XPF-type/HelicaseCoding geneHOM004754 ORTHO004613
X MT3G022860Unknown Protein (AHRD V1)Coding genesingleton
V MT3G022870NBS-LRR disease resistance-like protein (Fragment) (AHRD V1 *-*- Q2LEF3_9ROSI); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
X MT3TE022880rna_type=pre-trna;T10F20.23 protein (Fragment) (AHRD V1 *-*- Q9LMR6_ARATH); contains Interpro domain(s) IPR008906 HAT dimerisationTransposon
X MT3G022890Unknown Protein (AHRD V1)Coding genesingleton
X MT3TE022900rna_type=pre-trna;Transposon TX1 uncharacterized 149 kDa protein (AHRD V1 *--- P14381); contains Interpro domain(s) IPR015706 RNA-directed DNA polymerase (reverse transcriptase), relatedTransposon
X MT3G022910Unknown Protein (AHRD V1)Coding geneHOM021132 ORTHO037923
V MT3G022920Cc-nbs-lrr resistance protein (AHRD V1 ***- B9N450_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012
V MT3G022930TMV resistance protein N (AHRD V1 *-*- Q40392); contains Interpro domain(s) IPR000157 Toll-Interleukin receptorCoding geneHOM000008 ORTHO000067
V MT3G022940Cc-nbs-lrr resistance protein (AHRD V1 ***- B9N450_POPTR); contains Interpro domain(s) IPR002182 NB-ARCCoding geneHOM000009 ORTHO000012