Functional Clustering  


Cluster information

Cluster overview

Cluster id
CH_ath_24
Cluster type
GO
Species
Arabidopsis thaliana
Chromosome
4
E-value
2.81429e-16
GO label
GO:0006869
GO description
lipid transport
 

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species
HOM00020536323918

Gene information

In cluster Gene id Description Gene type Gene family
V AT4G12470Encodes AZI1 (AZELAIC ACID INDUCED 1). Involved in the priming of salicylic acid induction and systemic immunity triggered by pathogen or azelaic acid.;azelaic acid induced 1Coding geneHOM000205 ORTHO172567
V AT4G12480a putative lipid transfer protein, vernalization-responsive and cold-induced;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinCoding geneHOM000205 ORTHO006917
V AT4G12490Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12500.1); Has 18352 Blast hits to 7356 proteins in 861 species: Archae - 114; Bacteria - 4375; Metazoa - 2713; Fungi - 1220; Plants - 5360; Viruses - 1445; Other Eukaryotes - 3125 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinCoding geneHOM000205 ORTHO025958
V AT4G12500Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; EXPRESSED IN: hypocotyl, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12490.1); Has 10886 Blast hits to 4309 proteins in 594 species: Archae - 53; Bacteria - 1827; Metazoa - 1251; Fungi - 647; Plants - 4075; Viruses - 997; Other Eukaryotes - 2036 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinCoding geneHOM000205 ORTHO025958
V AT4G12510Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinCoding geneHOM000205 ORTHO006917
V AT4G12520Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinCoding geneHOM000205 ORTHO006917
V AT4G12530Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT4G12510.1); Has 749 Blast hits to 743 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 749; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinCoding geneHOM000205 ORTHO045391
X AT4G12540unknown protein; Has 29 Blast hits to 26 proteins in 11 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).Coding geneHOM006629 ORTHO010246
V AT4G12545Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Auxin-Induced in Root cultures 1 (TAIR:AT4G12550.1); Has 752 Blast hits to 746 proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 752; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily proteinCoding geneHOM000205 ORTHO046776
V AT4G12550isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.;Auxin-Induced in Root cultures 1Coding geneHOM000205 ORTHO046776