Functional clusters  


Information

Type
GO term
Identifier
GO:0055114
Description
oxidation reduction

Cluster overview

Exact GO match

Click table-header(s) to enable sorting
SpeciesChromosomeExperimentCluster_idCluster sizeNumber of genesE-value
Arabidopsis lyratascaffold_21CH_aly_2129797.23412e-16
Arabidopsis thaliana21CH_ath_7310110.000000000552897
Arabidopsis thaliana23CH_ath_2610110.000000000552897
Arabidopsis thaliana43CH_ath_3912260.000000351087
Arabidopsis thalianachloroplast1CH_ath_17217740.00000811855
Brachypodium distachyonBd41CH_bdi_123660.000153732
Brachypodium distachyonBd41CH_bdi_15014520.000590104
Brachypodium distachyonBd43CH_bdi_3914520.000590104
Brachypodium distachyonBd51CH_bdi_1607100.000695781
Fragaria vescaLG23CH_fve_65282420.000667146
Fragaria vescaLG31CH_fve_245670.000352383
Fragaria vescaLG71CH_fve_244670.000352383
Fragaria vescascf05131601CH_fve_14010200.00000924048
Fragaria vescascf05131603CH_fve_21331860.000000000238477
Fragaria vescascf05131681CH_fve_2617110.000514605
Malus domestica51CH_mdo_519390.00000000000000719137
Malus domestica53CH_mdo_319390.00000000000000719137
Manihot esculentascaffold028921CH_mes_110790.000218876
Manihot esculentascaffold112791CH_mes_103660.000150354
Micromonas sp. RCC299mitochondrial3CH_mrcc299_613420.000238946
Medicago truncatula61CH_mtr_39010420.000552366
Medicago truncatula63CH_mtr_13010390.000252254
Medicago truncatula63CH_mtr_14410420.000552366
Medicago truncatula71CH_mtr_10112230.000000000304484
Medicago truncatula72CH_mtr_6580.0000617145
Medicago truncatula73CH_mtr_5712230.000000000304484
Oryza sativa ssp. indicaChr071CH_osaindica_4414200.0000000000001264
Oryza sativa ssp. indicaChr073CH_osaindica_3114200.0000000000001264
Oryza sativa ssp. indicaChr101CH_osaindica_2558150.0000663355
Populus trichocarpachloroplast1CH_ptr_3527100.000564815
Populus trichocarpascaffold_13CH_ptr_6412290.0000125985
Ricinus communis299291CH_rco_135660.0000845881
Ricinus communis301281CH_rco_134660.0000845881
Selaginella moellendorffiiscaffold_1751CH_smo_528550.00000000000000290287
Selaginella moellendorffiiscaffold_243CH_smo_1210150.0000459781
Selaginella moellendorffiiscaffold_31CH_smo_5813270.000043663
Selaginella moellendorffiiscaffold_33CH_smo_1113270.000043663
Theobroma cacaoTc041CH_tca_2517110.0000829704
Theobroma cacaoTc043CH_tca_14911400.000123213
Theobroma cacaoTc051CH_tca_130770.000000274513
Theobroma cacaoTc051CH_tca_93880.00000000681194
Theobroma cacaoTc053CH_tca_15315860.000160143
Theobroma cacaoTc054CH_tca_7111660.000101931
Vitis viniferachr11CH_vvi_191990.00000136079
Vitis viniferachr11CH_vvi_21322630.00000508561
Vitis viniferachr13CH_vvi_10122630.00000508561
Vitis viniferachr103CH_vvi_132301260.000112121
Vitis viniferachr141CH_vvi_25610130.0000227975
Vitis viniferachr143CH_vvi_11410130.0000227975
Vitis viniferachr173CH_vvi_14912230.00031954
Vitis viniferachr181CH_vvi_18020470.000000499533
Vitis viniferachr184CH_vvi_3220890.0000100655
Vitis viniferachr51CH_vvi_11013140.000000000468578
Vitis viniferachr53CH_vvi_7813140.000000000468578
Zea mays13CH_zma_2110220.0000465981

Child GO matches

Click table-header(s) to enable sorting
SpeciesChromosomeExperimentCluster_idCluster sizeNumber of genesE-valueGODescription
Arabidopsis thaliana21CH_ath_1915550.0000169488GO:0022904respiratory electron transport chain
Arabidopsis thaliana22CH_ath_224490.000221852GO:0022904respiratory electron transport chain
Brachypodium distachyonchloroplast1CH_bdi_177520.0000000000032226GO:0022904respiratory electron transport chain
Carica papayachloroplast1CH_cpa_710670.0000000000000467546GO:0022900electron transport chain
Chlamydomonas reinhardtiimitochondrial1CH_cre_17340.00000361683GO:0022904respiratory electron transport chain
Chlamydomonas reinhardtiimitochondrial2CH_cre_44200.00000192796GO:0022904respiratory electron transport chain
Glycine maxchloroplast1CH_gma_3310670.000000000000100263GO:0022900electron transport chain
Glycine maxchloroplast3CH_gma_2111970.0000000000000375741GO:0022900electron transport chain
Malus domestica91CH_mdo_1803140.000331997GO:0009767photosynthetic electron transport chain
Manihot esculentachloroplast1CH_mes_1210700.00000000000182627GO:0022900electron transport chain
Manihot esculentachloroplast3CH_mes_7131290.0000000000000124891GO:0022900electron transport chain
Micromonas sp. RCC299mitochondrial1CH_mrcc299_49420.00000000000254061GO:0022900electron transport chain
Micromonas sp. RCC299mitochondrial2CH_mrcc299_16110.000000000000311316GO:0022904respiratory electron transport chain
Medicago truncatula12CH_mtr_135840.000701825GO:0022904respiratory electron transport chain
Medicago truncatula13CH_mtr_51112130.0000000000532047GO:0022904respiratory electron transport chain
Medicago truncatula41CH_mtr_3254100.000154726GO:0022900electron transport chain
Medicago truncatula42CH_mtr_74100.000081463GO:0022900electron transport chain
Oryza sativa ssp. japonica11CH_osa_318480.000405322GO:0022900electron transport chain
Oryza sativa ssp. japonica101CH_osa_2911256.53065e-17GO:0022900electron transport chain
Oryza sativa ssp. japonica102CH_osa_77180.0000000000553298GO:0022900electron transport chain
Oryza sativa ssp. japonica103CH_osa_2411256.53065e-17GO:0022900electron transport chain
Oryza sativa ssp. japonica104CH_osa_12102790.00000169878GO:0022900electron transport chain
Oryza sativa ssp. japonicamitochondrial2CH_osa_323190.00091066GO:0022904respiratory electron transport chain
Oryza sativa ssp. indicaChr011CH_osaindica_266480.0000885911GO:0022900electron transport chain
Oryza sativa ssp. indicaChr031CH_osaindica_163440.0000012744GO:0022900electron transport chain
Oryza sativa ssp. indicamitochondrial1CH_osaindica_766590.000000000183596GO:0022904respiratory electron transport chain
Oryza sativa ssp. indicamitochondrial2CH_osaindica_14190.0000000392611GO:0022904respiratory electron transport chain
Ostreococcus taurimitochondrial1CH_ota_211437.85723e-16GO:0022900electron transport chain
Ostreococcus taurimitochondrial2CH_ota_1450.0000000309285GO:0022904respiratory electron transport chain
Ostreococcus taurimitochondrial3CH_ota_211437.85723e-16GO:0022900electron transport chain
Physcomitrella patensmitochondrial1CH_ppa_47280.00000000000020423GO:0022904respiratory electron transport chain
Physcomitrella patensmitochondrial2CH_ppa_24130.0000000288334GO:0022904respiratory electron transport chain
Physcomitrella patensscaffold_281CH_ppa_32220.000356178GO:0006120mitochondrial electron transport, NADH to ubiquinone
Populus trichocarpachloroplast1CH_ptr_5010770.000000000000639941GO:0022900electron transport chain
Populus trichocarpachloroplast3CH_ptr_26121090.00000000000000258076GO:0022900electron transport chain
Populus trichocarpascaffold_112CH_ptr_14220.000841609GO:0042773ATP synthesis coupled electron transport
Ricinus communis301851CH_rco_1153170.0000392975GO:0042773ATP synthesis coupled electron transport
Sorghum bicolorchloroplast1CH_sbi_477560.0000000000806154GO:0022904respiratory electron transport chain
Sorghum bicolorchr_11CH_sbi_150440.0000030452GO:0022900electron transport chain
Sorghum bicolormitochondrial1CH_sbi_1864240.00003721GO:0022904respiratory electron transport chain
Theobroma cacaoTc051CH_tca_378610.000000000000538574GO:0022904respiratory electron transport chain
Theobroma cacaoTc052CH_tca_36610.00000000260698GO:0022904respiratory electron transport chain
Vitis viniferachloroplast1CH_vvi_9310730.0000000000538631GO:0022900electron transport chain
Vitis viniferachloroplast3CH_vvi_55131320.000000000000203692GO:0022900electron transport chain
Vitis viniferachrUn1CH_vvi_283340.0000522393GO:0042773ATP synthesis coupled electron transport
Vitis viniferamitochondrial1CH_vvi_21761350.00000608485GO:0022904respiratory electron transport chain
Zea mayschloroplast1CH_zma_237280.0000000000813666GO:0022904respiratory electron transport chain
Zea maysmitochondrial1CH_zma_856730.0000111125GO:0022904respiratory electron transport chain
Zea maysmitochondrial2CH_zma_25680.00016578GO:0022904respiratory electron transport chain

Functional clusters experiments

Experiment Type Description Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1C_HunterGO230800.001X
2C_HunterGO230800.001V
3C_HunterGO101503000.001X
4C_HunterGO101503000.001V