Functional clusters  


Information

Type
GO term
Identifier
GO:0032502
Description
developmental process

Cluster overview

Exact GO match

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SpeciesChromosomeExperimentCluster_idCluster sizeNumber of genesE-value
Arabidopsis lyratascaffold_44CH_aly_3271300.0000347474
Arabidopsis thaliana22CH_ath_2121840.000139844
Arabidopsis thaliana23CH_ath_6926910.0000434642
Arabidopsis thaliana24CH_ath_11291360.00001754
Brachypodium distachyonBd11CH_bdi_161340.000745834
Fragaria vescascf05131581CH_fve_23413580.000274653
Fragaria vescascf05131583CH_fve_5813580.000274653
Lotus japonicuschr33CH_lja_2413860.000104443
Medicago truncatula31CH_mtr_3957190.000601435
Theobroma cacaoTc021CH_tca_24812540.0000782894

Child GO matches

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SpeciesChromosomeExperimentCluster_idCluster sizeNumber of genesE-valueGODescription
Arabidopsis lyratascaffold_11CH_aly_99450.000000174961GO:0048527lateral root development
Arabidopsis lyratascaffold_21CH_aly_4210380.0000000000119386GO:0009555pollen development
Arabidopsis lyratascaffold_31CH_aly_1367240.00000360053GO:0009561megagametogenesis
Arabidopsis lyratascaffold_31CH_aly_185440.0000488454GO:0009561megagametogenesis
Arabidopsis lyratascaffold_31CH_aly_104550.000000302257GO:0009561megagametogenesis
Arabidopsis lyratascaffold_31CH_aly_2615750.0000000000000188452GO:0009561megagametogenesis
Arabidopsis lyratascaffold_31CH_aly_10310640.000000285879GO:0009561megagametogenesis
Arabidopsis lyratascaffold_31CH_aly_186440.0000488454GO:0009561megagametogenesis
Arabidopsis lyratascaffold_33CH_aly_10232870.0000000000000323325GO:0009561megagametogenesis
Arabidopsis lyratascaffold_33CH_aly_15202540.00000000000791956GO:0009561megagametogenesis
Arabidopsis lyratascaffold_33CH_aly_4352589.79911e-32GO:0009561megagametogenesis
Arabidopsis lyratascaffold_42CH_aly_117490.000832324GO:0007275multicellular organismal development
Arabidopsis lyratascaffold_43CH_aly_62101650.000962216GO:0048229gametophyte development
Arabidopsis lyratascaffold_51CH_aly_135440.00000347217GO:0009860pollen tube growth
Arabidopsis lyratascaffold_51CH_aly_108480.000000385912GO:0010584pollen exine formation
Arabidopsis lyratascaffold_53CH_aly_45101590.000110965GO:0000904cell morphogenesis involved in differentiation
Arabidopsis lyratascaffold_61CH_aly_216330.000165756GO:0009845seed germination
Arabidopsis lyratascaffold_71CH_aly_156440.00000831348GO:0009555pollen development
Arabidopsis lyratascaffold_71CH_aly_146340.00000526082GO:0010162seed dormancy
Arabidopsis lyratascaffold_71CH_aly_319100.000000000000106952GO:0007275multicellular organismal development
Arabidopsis lyratascaffold_71CH_aly_1838200.0000458479GO:0009790embryonic development
Arabidopsis lyratascaffold_71CH_aly_508110.00000000019864GO:0007275multicellular organismal development
Arabidopsis lyratascaffold_72CH_aly_75130.000294623GO:0007275multicellular organismal development
Arabidopsis lyratascaffold_73CH_aly_1310160.00000000000071728GO:0007275multicellular organismal development
Arabidopsis lyratascaffold_81CH_aly_226220.000189412GO:0045604regulation of epidermal cell differentiation
Arabidopsis lyratascaffold_81CH_aly_283220.000631373GO:0048439flower morphogenesis
Arabidopsis thaliana11CH_ath_286220.000357122GO:0010072primary shoot apical meristem specification
Arabidopsis thaliana11CH_ath_617110.000000000127334GO:0009555pollen development
Arabidopsis thaliana11CH_ath_86580.00000000345977GO:0048527lateral root development
Arabidopsis thaliana13CH_ath_57151820.00000974049GO:0007275multicellular organismal development
Arabidopsis thaliana21CH_ath_123330.000000185995GO:0080050regulation of seed development
Arabidopsis thaliana21CH_ath_1977460.0000184241GO:0009555pollen development
Arabidopsis thaliana23CH_ath_43101150.00000101026GO:0009555pollen development
Arabidopsis thaliana31CH_ath_119470.000000161748GO:0010584pollen exine formation
Arabidopsis thaliana41CH_ath_161340.00000467537GO:0010162seed dormancy
Arabidopsis thaliana41CH_ath_17814710.0000104787GO:0009793embryonic development ending in seed dormancy
Arabidopsis thaliana41CH_ath_5610120.0000000000426587GO:0009793embryonic development ending in seed dormancy
Arabidopsis thaliana41CH_ath_169440.00000741238GO:0009555pollen development
Arabidopsis thaliana43CH_ath_2210120.0000000000426587GO:0009793embryonic development ending in seed dormancy
Arabidopsis thaliana43CH_ath_4816870.00000172213GO:0009793embryonic development ending in seed dormancy
Arabidopsis thaliana51CH_ath_260220.000178561GO:0045604regulation of epidermal cell differentiation
Arabidopsis thaliana51CH_ath_285220.000357122GO:0048439flower morphogenesis
Arabidopsis thaliana51CH_ath_268330.000200981GO:0009845seed germination
Brachypodium distachyonBd21CH_bdi_130350.000194072GO:0007275multicellular organismal development
Brachypodium distachyonBd21CH_bdi_345100.00000000317582GO:0007275multicellular organismal development
Brachypodium distachyonBd31CH_bdi_114220.0000750497GO:0048657tapetal cell differentiation
Carica papayasupercontig_101CH_cpa_495130.000000919413GO:0009555pollen development
Carica papayasupercontig_1031CH_cpa_76330.0000367595GO:0007568aging
Carica papayasupercontig_121CH_cpa_35460.0000000135811GO:0009561megagametogenesis
Carica papayasupercontig_1831CH_cpa_117220.000291248GO:0009955adaxial/abaxial pattern formation
Carica papayasupercontig_271CH_cpa_44370.000000494743GO:0009960endosperm development
Carica papayasupercontig_71CH_cpa_41330.000000141383GO:0010022meristem determinacy
Fragaria vescaLG21CH_fve_16660.0000000000000664987GO:0009845seed germination
Fragaria vescaLG21CH_fve_184220.0000598784GO:0048658tapetal layer development
Fragaria vescaLG41CH_fve_292220.000898177GO:0010016shoot morphogenesis
Fragaria vescascf05131581CH_fve_77340.0000000860483GO:0080050regulation of seed development
Glycine maxGm011CH_gma_271330.000257128GO:0009860pollen tube growth
Glycine maxGm021CH_gma_248220.000129578GO:0048446petal morphogenesis
Glycine maxGm041CH_gma_285220.000259157GO:0010623developmental programmed cell death
Glycine maxGm061CH_gma_160340.00000134309GO:0009955adaxial/abaxial pattern formation
Glycine maxGm061CH_gma_286220.000259157GO:0010623developmental programmed cell death
Glycine maxGm101CH_gma_247220.000129578GO:0010054trichoblast differentiation
Glycine maxGm121CH_gma_311220.000431928GO:0010260organ senescence
Glycine maxGm141CH_gma_22786.30213e-16GO:0048527lateral root development
Glycine maxGm161CH_gma_270330.000257128GO:0009860pollen tube growth
Glycine maxGm201CH_gma_39440.0000000000012088GO:0080050regulation of seed development
Lotus japonicuschr01CH_lja_169220.000685848GO:0048653anther development
Lotus japonicuschr01CH_lja_595290.00000190531GO:0048580regulation of post-embryonic development
Lotus japonicuschr21CH_lja_26450.00000000484305GO:0007568aging
Lotus japonicuschr32CH_lja_33330.000581907GO:0009653anatomical structure morphogenesis
Lotus japonicuschr51CH_lja_124230.000205747GO:0010073meristem maintenance
Lotus japonicuschr51CH_lja_773150.0000128328GO:0009835ripening
Malus domestica31CH_mdo_174220.000276951GO:0010054trichoblast differentiation
Malus domestica51CH_mdo_124440.0000499715GO:0009790embryonic development
Manihot esculentascaffold048901CH_mes_62470.00000245304GO:0007568aging
Medicago truncatula11CH_mtr_1054200.000000000623738GO:0010054trichoblast differentiation
Medicago truncatula11CH_mtr_272340.0000439981GO:0009845seed germination
Medicago truncatula31CH_mtr_2283210.00000977776GO:0048439flower morphogenesis
Medicago truncatula51CH_mtr_6910680.00000000000575899GO:0007275multicellular organismal development
Medicago truncatula53CH_mtr_4410680.00000000000575899GO:0007275multicellular organismal development
Medicago truncatula61CH_mtr_787330.0000000000196891GO:0009860pollen tube growth
Medicago truncatulaAC235748.81CH_mtr_271350.0000422697GO:0010051xylem and phloem pattern formation
Ostreococcus lucimarinusChr_11CH_olu_15220.000256246GO:0007275multicellular organismal development
Ostreococcus lucimarinusChr_12CH_olu_1220.000266987GO:0007275multicellular organismal development
Oryza sativa ssp. japonica11CH_osa_1210301.25642e-22GO:0007275multicellular organismal development
Oryza sativa ssp. japonica51CH_osa_106450.0000000108614GO:0007275multicellular organismal development
Oryza sativa ssp. indicaChr011CH_osaindica_811316.61624e-25GO:0007275multicellular organismal development
Oryza sativa ssp. indicaChr013CH_osaindica_911316.61624e-25GO:0007275multicellular organismal development
Oryza sativa ssp. indicaChr051CH_osaindica_117450.0000000192271GO:0007275multicellular organismal development
Physcomitrella patensscaffold_631CH_ppa_41230.000534241GO:0007530sex determination
Populus trichocarpascaffold_11CH_ptr_370220.000758399GO:0009955adaxial/abaxial pattern formation
Populus trichocarpascaffold_101CH_ptr_1903100.00000459944GO:0080050regulation of seed development
Populus trichocarpascaffold_101CH_ptr_353580.000571293GO:0048856anatomical structure development
Populus trichocarpascaffold_141CH_ptr_316340.000189141GO:0010051xylem and phloem pattern formation
Populus trichocarpascaffold_141CH_ptr_183330.00000371569GO:0048767root hair elongation
Populus trichocarpascaffold_151CH_ptr_379230.000910025GO:0045165cell fate commitment
Populus trichocarpascaffold_161CH_ptr_1311441.43959e-22GO:0009561megagametogenesis
Populus trichocarpascaffold_163CH_ptr_1211441.43959e-22GO:0009561megagametogenesis
Populus trichocarpascaffold_21CH_ptr_304220.00015168GO:0009835ripening
Populus trichocarpascaffold_21CH_ptr_364220.000758399GO:0010054trichoblast differentiation
Populus trichocarpascaffold_21CH_ptr_209330.0000112161GO:0048527lateral root development
Populus trichocarpascaffold_41CH_ptr_349220.0005056GO:0080006internode patterning
Populus trichocarpascaffold_41CH_ptr_306220.00015168GO:0048586regulation of long-day photoperiodism, flowering
Populus trichocarpascaffold_42CH_ptr_7220.000168322GO:0080006internode patterning
Populus trichocarpascaffold_81CH_ptr_2017150.00000906117GO:0048856anatomical structure development
Populus trichocarpascaffold_91CH_ptr_348220.0005056GO:0080006internode patterning
Ricinus communis298131CH_rco_142220.0000981981GO:0080050regulation of seed development
Ricinus communis298691CH_rco_73360.000000289257GO:0048658tapetal layer development
Ricinus communis299861CH_rco_59330.00000005786GO:0010054trichoblast differentiation
Ricinus communis300051CH_rco_131330.000078921GO:0009845seed germination
Ricinus communis300761CH_rco_45440.00000000203142GO:0048767root hair elongation
Ricinus communis301471CH_rco_60440.0000000674801GO:0009860pollen tube growth
Sorghum bicolorchr_31CH_sbi_121378.47562e-49GO:0007275multicellular organismal development
Sorghum bicolorchr_33CH_sbi_121378.47562e-49GO:0007275multicellular organismal development
Sorghum bicolorchr_91CH_sbi_426100.0000000000293267GO:0007275multicellular organismal development
Selaginella moellendorffiiscaffold_391CH_smo_62350.0000594482GO:0030582fruiting body development
Theobroma cacaoTc001CH_tca_3303120.000701045GO:0048527lateral root development
Theobroma cacaoTc001CH_tca_311220.000432255GO:0010054trichoblast differentiation
Theobroma cacaoTc021CH_tca_180360.0000047069GO:0048440carpel development
Theobroma cacaoTc101CH_tca_187104.13957e-16GO:0009561megagametogenesis
Theobroma cacaoTc101CH_tca_243340.0000733357GO:0009561megagametogenesis
Vitis viniferachr11CH_vvi_168460.000000169339GO:0048316seed development
Vitis viniferachr11CH_vvi_86450.0000000000319093GO:0080050regulation of seed development
Vitis viniferachr11CH_vvi_247490.0000131568GO:0009860pollen tube growth
Vitis viniferachr103CH_vvi_103101770.00000630193GO:0048364root development
Vitis viniferachr121CH_vvi_1625160.000000123434GO:0007568aging
Vitis viniferachr131CH_vvi_292220.0000752106GO:0009830cell wall modification during abscission
Vitis viniferachr151CH_vvi_250440.000014053GO:0007275multicellular organismal development
Vitis viniferachr161CH_vvi_296220.0000752106GO:0048730epidermis morphogenesis
Vitis viniferachr161CH_vvi_158440.00000010499GO:0009860pollen tube growth
Vitis viniferachr181CH_vvi_297220.0000752106GO:0007569cell aging
Vitis viniferachr71CH_vvi_127330.00000000848527GO:0010054trichoblast differentiation

Functional clusters experiments

Experiment Type Description Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1C_HunterGO230800.001X
2C_HunterGO230800.001V
3C_HunterGO101503000.001X
4C_HunterGO101503000.001V