Functional clusters  


Information

Type
GO term
Identifier
GO:0022900
Description
electron transport chain

Cluster overview

Exact GO match

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SpeciesChromosomeExperimentCluster_idCluster sizeNumber of genesE-value
Carica papayachloroplast1CH_cpa_710670.0000000000000467546
Glycine maxchloroplast1CH_gma_3310670.000000000000100263
Glycine maxchloroplast3CH_gma_2111970.0000000000000375741
Manihot esculentachloroplast1CH_mes_1210700.00000000000182627
Manihot esculentachloroplast3CH_mes_7131290.0000000000000124891
Micromonas sp. RCC299mitochondrial1CH_mrcc299_49420.00000000000254061
Medicago truncatula41CH_mtr_3254100.000154726
Medicago truncatula42CH_mtr_74100.000081463
Oryza sativa ssp. japonica11CH_osa_318480.000405322
Oryza sativa ssp. japonica101CH_osa_2911256.53065e-17
Oryza sativa ssp. japonica102CH_osa_77180.0000000000553298
Oryza sativa ssp. japonica103CH_osa_2411256.53065e-17
Oryza sativa ssp. japonica104CH_osa_12102790.00000169878
Oryza sativa ssp. indicaChr011CH_osaindica_266480.0000885911
Oryza sativa ssp. indicaChr031CH_osaindica_163440.0000012744
Ostreococcus taurimitochondrial1CH_ota_211437.85723e-16
Ostreococcus taurimitochondrial3CH_ota_211437.85723e-16
Populus trichocarpachloroplast1CH_ptr_5010770.000000000000639941
Populus trichocarpachloroplast3CH_ptr_26121090.00000000000000258076
Sorghum bicolorchr_11CH_sbi_150440.0000030452
Vitis viniferachloroplast1CH_vvi_9310730.0000000000538631
Vitis viniferachloroplast3CH_vvi_55131320.000000000000203692

Child GO matches

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SpeciesChromosomeExperimentCluster_idCluster sizeNumber of genesE-valueGODescription
Arabidopsis thaliana21CH_ath_1915550.0000169488GO:0022904respiratory electron transport chain
Arabidopsis thaliana22CH_ath_224490.000221852GO:0022904respiratory electron transport chain
Brachypodium distachyonchloroplast1CH_bdi_177520.0000000000032226GO:0022904respiratory electron transport chain
Chlamydomonas reinhardtiimitochondrial1CH_cre_17340.00000361683GO:0022904respiratory electron transport chain
Chlamydomonas reinhardtiimitochondrial2CH_cre_44200.00000192796GO:0022904respiratory electron transport chain
Malus domestica91CH_mdo_1803140.000331997GO:0009767photosynthetic electron transport chain
Micromonas sp. RCC299mitochondrial2CH_mrcc299_16110.000000000000311316GO:0022904respiratory electron transport chain
Medicago truncatula12CH_mtr_135840.000701825GO:0022904respiratory electron transport chain
Medicago truncatula13CH_mtr_51112130.0000000000532047GO:0022904respiratory electron transport chain
Oryza sativa ssp. japonicamitochondrial2CH_osa_323190.00091066GO:0022904respiratory electron transport chain
Oryza sativa ssp. indicamitochondrial1CH_osaindica_766590.000000000183596GO:0022904respiratory electron transport chain
Oryza sativa ssp. indicamitochondrial2CH_osaindica_14190.0000000392611GO:0022904respiratory electron transport chain
Ostreococcus taurimitochondrial2CH_ota_1450.0000000309285GO:0022904respiratory electron transport chain
Physcomitrella patensmitochondrial1CH_ppa_47280.00000000000020423GO:0022904respiratory electron transport chain
Physcomitrella patensmitochondrial2CH_ppa_24130.0000000288334GO:0022904respiratory electron transport chain
Physcomitrella patensscaffold_281CH_ppa_32220.000356178GO:0006120mitochondrial electron transport, NADH to ubiquinone
Populus trichocarpascaffold_112CH_ptr_14220.000841609GO:0042773ATP synthesis coupled electron transport
Ricinus communis301851CH_rco_1153170.0000392975GO:0042773ATP synthesis coupled electron transport
Sorghum bicolorchloroplast1CH_sbi_477560.0000000000806154GO:0022904respiratory electron transport chain
Sorghum bicolormitochondrial1CH_sbi_1864240.00003721GO:0022904respiratory electron transport chain
Theobroma cacaoTc051CH_tca_378610.000000000000538574GO:0022904respiratory electron transport chain
Theobroma cacaoTc052CH_tca_36610.00000000260698GO:0022904respiratory electron transport chain
Vitis viniferachrUn1CH_vvi_283340.0000522393GO:0042773ATP synthesis coupled electron transport
Vitis viniferamitochondrial1CH_vvi_21761350.00000608485GO:0022904respiratory electron transport chain
Zea mayschloroplast1CH_zma_237280.0000000000813666GO:0022904respiratory electron transport chain
Zea maysmitochondrial1CH_zma_856730.0000111125GO:0022904respiratory electron transport chain
Zea maysmitochondrial2CH_zma_25680.00016578GO:0022904respiratory electron transport chain

Functional clusters experiments

Experiment Type Description Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1C_HunterGO230800.001X
2C_HunterGO230800.001V
3C_HunterGO101503000.001X
4C_HunterGO101503000.001V